RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 CACNG2Q9Y698 323 aa10.41□□□□□ -0.74
PTPRF-213ENST00000481019 FN1P02751 2386 aaKnown RBP10.41□□□□□ -0.74
PTPRF-213ENST00000481019 YLPM1P49750 1951 aaKnown RBP10.41□□□□□ -0.74
PTPRF-213ENST00000481019 IGHV4-61A0A0C4DH41 118 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 METTL15A6NJ78 407 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 PRR32B1ATL7 298 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 J3QLW9 94 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 SPRY3O43610 288 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 INMTO95050 263 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 APOL3O95236 402 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 IGHV1-46P01743 117 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 SLC2A1P11166 492 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 ZNF19P17023 458 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 GCH1P30793 250 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 RGS6P49758 472 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 PDLIM4P50479 330 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 CCL8P80075 99 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 TPBGQ13641 420 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 EIF2B1Q14232 305 aaKnown RBP10.4□□□□□ -0.74
PTPRF-213ENST00000481019 SNAI3Q3KNW1 292 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 OR2T2Q6IF00 324 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 CLEC9AQ6UXN8 241 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 BIVMQ86UB2 503 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 ZNF679Q8IYX0 411 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 MS4A15Q8N5U1 240 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 UBASH3BQ8TF42 649 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 NEU4Q8WWR8 484 aaPredicted RBP10.4□□□□□ -0.74
PTPRF-213ENST00000481019 GATAD2BQ8WXI9 593 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 HAVCR1Q96D42 359 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 DCLRE1CQ96SD1 692 aaKnown RBP10.4□□□□□ -0.74
PTPRF-213ENST00000481019 TBX5Q99593 518 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 ABHD6Q9BV23 337 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 BPESC1Q9GZL8 116 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 MS4A5Q9H3V2 200 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 SLCO1C1Q9NYB5 712 aa10.4□□□□□ -0.74
PTPRF-213ENST00000481019 RSL24D1Q9UHA3 163 aaKnown RBP10.4□□□□□ -0.74
PTPRF-213ENST00000481019 LSM2Q9Y333 95 aaKnown RBP10.4□□□□□ -0.74
PTPRF-213ENST00000481019 WNT9BO14905 357 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 CDC14BO60729 498 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 RP2O75695 350 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 SERPINA3P01011 423 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 CD1AP06126 327 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 CD36P16671 472 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 CPEP16870 476 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 KITLGP21583 273 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 GALP22466 123 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 OTX1P32242 354 aaPredicted RBP10.39□□□□□ -0.75
PTPRF-213ENST00000481019 DCTDP32321 178 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 NR4A2P43354 598 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 TGM4P49221 684 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 ZNF81P51508 661 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 PRKXP51817 358 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 RIDAP52758 137 aaKnown RBP10.39□□□□□ -0.75
PTPRF-213ENST00000481019 DSCR9P59020 149 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 ROM1Q03395 351 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 ECH1Q13011 328 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 RIN1Q13671 783 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 RPL22L1Q6P5R6 122 aaKnown RBP10.39□□□□□ -0.75
PTPRF-213ENST00000481019 ARL9Q6T311 187 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 FBXW12Q6X9E4 464 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 KRT77Q7Z794 578 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 ANKRD13BQ86YJ7 626 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 CLVS1Q8IUQ0 354 aaPredicted RBP10.39□□□□□ -0.75
PTPRF-213ENST00000481019 OR5AS1Q8N127 324 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 RFLNBQ8N5W9 214 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 RNF133Q8WVZ7 376 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 SPRYD4Q8WW59 207 aaPredicted RBP10.39□□□□□ -0.75
PTPRF-213ENST00000481019 THRSPQ92748 146 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 APOBEC3DQ96AK3 386 aaPredicted RBP10.39□□□□□ -0.75
PTPRF-213ENST00000481019 C4orf36Q96KX1 117 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 SOX7Q9BT81 388 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 CENPMQ9NSP4 180 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 DCAF16Q9NXF7 216 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 TREM2Q9NZC2 230 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 IKZF2Q9UKS7 526 aa10.39□□□□□ -0.75
PTPRF-213ENST00000481019 SONP18583 2426 aaKnown RBP10.39□□□□□ -0.75
PTPRF-213ENST00000481019 ABCA1O95477 2261 aa10.38□□□□□ -0.75
PTPRF-213ENST00000481019 LOC390937A0A1W2PQ73 354 aa10.38□□□□□ -0.75
PTPRF-213ENST00000481019 LRP5LA4QPB2 252 aa10.38□□□□□ -0.75
PTPRF-213ENST00000481019 H0YL77 283 aa10.38□□□□□ -0.75
PTPRF-213ENST00000481019 H3BSA7 217 aa10.38□□□□□ -0.75
PTPRF-213ENST00000481019 M0R135 149 aa10.38□□□□□ -0.75
PTPRF-213ENST00000481019 TIMM8AO60220 97 aaPredicted RBP10.38□□□□□ -0.75
PTPRF-213ENST00000481019 LCATP04180 440 aa10.38□□□□□ -0.75
PTPRF-213ENST00000481019 HLA-DPB1P04440 258 aa10.38□□□□□ -0.75
PTPRF-213ENST00000481019 HEXAP06865 529 aa10.38□□□□□ -0.75
PTPRF-213ENST00000481019 GIFP27352 417 aa10.38□□□□□ -0.75
PTPRF-213ENST00000481019 IL2RGP31785 369 aa10.38□□□□□ -0.75
PTPRF-213ENST00000481019 OPRL1P41146 370 aa10.38□□□□□ -0.75
PTPRF-213ENST00000481019 GP2P55259 537 aaKnown RBP10.38□□□□□ -0.75
PTPRF-213ENST00000481019 SELENOVP59797 346 aa10.38□□□□□ -0.75
PTPRF-213ENST00000481019 ZNF85Q03923 595 aa10.38□□□□□ -0.75
PTPRF-213ENST00000481019 TAF13Q15543 124 aa10.38□□□□□ -0.75
PTPRF-213ENST00000481019 GLYATL3Q5SZD4 288 aa10.38□□□□□ -0.75
PTPRF-213ENST00000481019 OR2G6Q5TZ20 316 aa10.38□□□□□ -0.75
PTPRF-213ENST00000481019 GPR107Q5VW38 600 aa10.38□□□□□ -0.75
PTPRF-213ENST00000481019 YIPF7Q8N8F6 280 aa10.38□□□□□ -0.75
PTPRF-213ENST00000481019 OR2AE1Q8NHA4 323 aa10.38□□□□□ -0.75
PTPRF-213ENST00000481019 ZNF799Q96GE5 643 aa10.38□□□□□ -0.75
PTPRF-213ENST00000481019 OR5M11Q96RB7 305 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms