RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	PLEKHG7	Q6ZR37	379 aa		13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	C17orf107	Q6ZR85	190 aa		13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	BCDIN3D	Q7Z5W3	292 aa	Known RBP	13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	KRT77	Q7Z794	578 aa		13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	OR10H4	Q8NGA5	316 aa		13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	AKR7L	Q8NHP1	331 aa		13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	FGFBP3	Q8TAT2	258 aa		13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	RNF133	Q8WVZ7	376 aa		13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	ITFG2	Q969R8	447 aa		13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	ZNF75A	Q96N20	296 aa		13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	CITED1	Q99966	193 aa		13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	COPS4	Q9BT78	406 aa		13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	ABHD6	Q9BV23	337 aa		13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	CENPM	Q9NSP4	180 aa		13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	CNOT2	Q9NZN8	540 aa	Known RBP	13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	EXOG	Q9Y2C4	368 aa	Known RBP	13.15	□□□□□ -0.3
HDLBP-238	ENST00000479894	DAPL1	A0PJW8	107 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	ZNF503-AS2	A6NEH8	195 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	ACOD1	A6NK06	481 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	ICMT	O60725	284 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	WBP4	O75554	376 aa	Known RBP	13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	SULT1C4	O75897	302 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	KNG1	P01042	644 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	KRT8	P05787	483 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	RPSA	P08865	295 aa	Known RBP	13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	CCDC159	P0C7I6	412 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	PIP	P12273	146 aa	Predicted RBP	13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	ZNF35	P13682	527 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	MYL12A	P19105	171 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	DCTD	P32321	178 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	ACTA2	P62736	377 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	ACTG2	P63267	376 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	ROM1	Q03395	351 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	MVK	Q03426	396 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	ZNF91	Q05481	1191 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	MRPL28	Q13084	256 aa	Known RBP	13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	SLC9A3R2	Q15599	337 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	MOG	Q16653	247 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	CCDC92	Q53HC0	331 aa	Predicted RBP	13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	ARMCX4	Q5H9R4	360 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	C6orf141	Q5SZD1	244 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	TMEM154	Q6P9G4	183 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	DRAM2	Q6UX65	266 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	CPEB3	Q8NE35	698 aa	Known RBP	13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	CNIH3	Q8TBE1	160 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	ST7L	Q8TDW4	575 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	SNX33	Q8WV41	574 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	MYDGF	Q969H8	173 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	POM121L2	Q96KW2	1035 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	ZNF48	Q96MX3	618 aa	Predicted RBP	13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	KCNJ15	Q99712	375 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	SYT3	Q9BQG1	590 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	YTHDF1	Q9BYJ9	559 aa	Known RBP	13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	TBCCD1	Q9NVR7	557 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	ZNF69	Q9UC07	566 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894	RYR3	Q15413	4870 aa		13.14	□□□□□ -0.31
HDLBP-238	ENST00000479894		H3BSA7	217 aa		13.13	□□□□□ -0.31
HDLBP-238	ENST00000479894	FAM20B	O75063	409 aa		13.13	□□□□□ -0.31
HDLBP-238	ENST00000479894	ABHD16A	O95870	558 aa		13.13	□□□□□ -0.31
HDLBP-238	ENST00000479894	MRPL3	P09001	348 aa	Known RBP	13.13	□□□□□ -0.31
HDLBP-238	ENST00000479894	CCNO	P22674	350 aa		13.13	□□□□□ -0.31
HDLBP-238	ENST00000479894	CRYBB2	P43320	205 aa		13.13	□□□□□ -0.31
HDLBP-238	ENST00000479894	ZNF829	Q3KNS6	432 aa	Predicted RBP	13.13	□□□□□ -0.31
HDLBP-238	ENST00000479894	AVPI1	Q5T686	147 aa		13.13	□□□□□ -0.31
HDLBP-238	ENST00000479894	ZNF322	Q6U7Q0	402 aa	Predicted RBP	13.13	□□□□□ -0.31
HDLBP-238	ENST00000479894	CFAP77	Q6ZQR2	320 aa		13.13	□□□□□ -0.31
HDLBP-238	ENST00000479894	FAM220A	Q7Z4H9	259 aa		13.13	□□□□□ -0.31
HDLBP-238	ENST00000479894	ZNF679	Q8IYX0	411 aa		13.13	□□□□□ -0.31
HDLBP-238	ENST00000479894	APH1B	Q8WW43	257 aa		13.13	□□□□□ -0.31
HDLBP-238	ENST00000479894	APOBEC3D	Q96AK3	386 aa	Predicted RBP	13.13	□□□□□ -0.31
HDLBP-238	ENST00000479894	MAP6	Q96JE9	813 aa		13.13	□□□□□ -0.31
HDLBP-238	ENST00000479894	C4orf45	Q96LM5	186 aa		13.13	□□□□□ -0.31
HDLBP-238	ENST00000479894	CNBD2	Q96M20	576 aa		13.13	□□□□□ -0.31
HDLBP-238	ENST00000479894	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	13.13	□□□□□ -0.31
HDLBP-238	ENST00000479894	GPR160	Q9UJ42	338 aa		13.13	□□□□□ -0.31
HDLBP-238	ENST00000479894	EXOSC1	Q9Y3B2	195 aa	Known RBP	13.13	□□□□□ -0.31
HDLBP-238	ENST00000479894	OPRL1	P41146	370 aa		13.12	□□□□□ -0.31
HDLBP-238	ENST00000479894	RIDA	P52758	137 aa	Known RBP	13.12	□□□□□ -0.31
HDLBP-238	ENST00000479894	UCP2	P55851	309 aa		13.12	□□□□□ -0.31
HDLBP-238	ENST00000479894	MALL	Q13021	153 aa		13.12	□□□□□ -0.31
HDLBP-238	ENST00000479894	RBM48	Q5RL73	367 aa	Known RBP	13.12	□□□□□ -0.31
HDLBP-238	ENST00000479894	C16orf87	Q6PH81	154 aa		13.12	□□□□□ -0.31
HDLBP-238	ENST00000479894	LYPD4	Q6UWN0	246 aa		13.12	□□□□□ -0.31
HDLBP-238	ENST00000479894	TMPRSS11A	Q6ZMR5	421 aa		13.12	□□□□□ -0.31
HDLBP-238	ENST00000479894	ZNF584	Q8IVC4	421 aa		13.12	□□□□□ -0.31
HDLBP-238	ENST00000479894	STX19	Q8N4C7	294 aa		13.12	□□□□□ -0.31
HDLBP-238	ENST00000479894	BPIFB6	Q8NFQ5	453 aa		13.12	□□□□□ -0.31
HDLBP-238	ENST00000479894	OR52H1	Q8NGJ2	320 aa		13.12	□□□□□ -0.31
HDLBP-238	ENST00000479894	LGALS12	Q96DT0	336 aa		13.12	□□□□□ -0.31
HDLBP-238	ENST00000479894	TMEM80	Q96HE8	168 aa		13.12	□□□□□ -0.31
HDLBP-238	ENST00000479894	MS4A3	Q96HJ5	214 aa		13.12	□□□□□ -0.31
HDLBP-238	ENST00000479894	OR8B4	Q96RC9	309 aa		13.12	□□□□□ -0.31
HDLBP-238	ENST00000479894	JAM3	Q9BX67	310 aa		13.12	□□□□□ -0.31
HDLBP-238	ENST00000479894	BEX1	Q9HBH7	125 aa		13.12	□□□□□ -0.31
HDLBP-238	ENST00000479894	FGF20	Q9NP95	211 aa	Predicted RBP	13.12	□□□□□ -0.31
HDLBP-238	ENST00000479894	NKIRAS2	Q9NYR9	191 aa		13.12	□□□□□ -0.31
HDLBP-238	ENST00000479894	MYEF2	Q9P2K5	600 aa	Known RBP	13.12	□□□□□ -0.31
HDLBP-238	ENST00000479894	IKZF2	Q9UKS7	526 aa		13.12	□□□□□ -0.31
HDLBP-238	ENST00000479894	WIPI2	Q9Y4P8	454 aa		13.12	□□□□□ -0.31
HDLBP-238	ENST00000479894	TANC2	Q9HCD6	1990 aa		13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms