RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 TMEM178AQ8NBL3 297 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 LFNGQ8NES3 379 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 PPP1R35Q8TAP8 253 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 SFT2D1Q8WV19 159 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 FOXJ3Q9UPW0 622 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 TIMM10BQ9Y5J6 103 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 CHD5Q8TDI0 1954 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 SPTA1P02549 2419 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 ZNF728P0DKX0 622 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 SHBQ15464 509 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 HIST2H3AQ71DI3 136 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 OR9K2Q8NGE7 335 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 OR52B4Q8NGK2 314 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 OBP2BQ9NPH6 170 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 ZNF354AO60765 605 aaPredicted RBP12.85□□□□□ -0.35
COL20A1-206ENST00000479501 CRYBA2P53672 197 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 ISXQ2M1V0 245 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 GAB4Q2WGN9 574 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 NOXO1Q8NFA2 376 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 OR1J2Q8NGS2 313 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 FN3KRPQ9HA64 309 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 SLC39A9Q9NUM3 307 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 OR5V1Q9UGF6 321 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 UMAD1C9J7I0 102 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 TOX3O15405 576 aaPredicted RBP12.85□□□□□ -0.35
COL20A1-206ENST00000479501 ABOP16442 354 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 OGFOD3Q6PK18 319 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 OR4D9Q8NGE8 314 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 PPP1R1CQ8WVI7 109 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 SECTM1Q8WVN6 248 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 GNRHR2Q96P88 292 aa12.85□□□□□ -0.35
COL20A1-206ENST00000479501 MRM2Q9UI43 246 aaKnown RBP12.85□□□□□ -0.35
COL20A1-206ENST00000479501 LSM2Q9Y333 95 aaKnown RBP12.85□□□□□ -0.35
COL20A1-206ENST00000479501 DNAJC13O75165 2243 aa12.84□□□□□ -0.35
COL20A1-206ENST00000479501 PLPP3O14495 311 aa12.84□□□□□ -0.35
COL20A1-206ENST00000479501 GUCA2AQ02747 115 aa12.84□□□□□ -0.35
COL20A1-206ENST00000479501 SKP2Q13309 424 aa12.84□□□□□ -0.35
COL20A1-206ENST00000479501 DEGS2Q6QHC5 323 aa12.84□□□□□ -0.35
COL20A1-206ENST00000479501 TMEM91Q6ZNR0 172 aa12.84□□□□□ -0.35
COL20A1-206ENST00000479501 ZNF561Q8N587 486 aa12.84□□□□□ -0.35
COL20A1-206ENST00000479501 TRMT61AQ96FX7 289 aaKnown RBP12.84□□□□□ -0.35
COL20A1-206ENST00000479501 BCO1Q9HAY6 547 aa12.84□□□□□ -0.35
COL20A1-206ENST00000479501 DCTN6O00399 190 aa12.84□□□□□ -0.35
COL20A1-206ENST00000479501 HSPB6O14558 160 aa12.84□□□□□ -0.35
COL20A1-206ENST00000479501 GLSO94925 669 aaPredicted RBP12.84□□□□□ -0.35
COL20A1-206ENST00000479501 MT-ND4LP03901 98 aa12.84□□□□□ -0.35
COL20A1-206ENST00000479501 DSCR4P56555 118 aaPredicted RBP12.84□□□□□ -0.35
COL20A1-206ENST00000479501 Q6ZRG5 221 aa12.84□□□□□ -0.35
COL20A1-206ENST00000479501 SCARF2Q96GP6 870 aaPredicted RBP12.84□□□□□ -0.35
COL20A1-206ENST00000479501 GAB2Q9UQC2 676 aa12.84□□□□□ -0.35
COL20A1-206ENST00000479501 TRPM7Q96QT4 1865 aa12.84□□□□□ -0.35
COL20A1-206ENST00000479501 A0A1W2PQD3 144 aa12.84□□□□□ -0.35
COL20A1-206ENST00000479501 TCRBV16S1A1N1A0A5B0 115 aa12.84□□□□□ -0.35
COL20A1-206ENST00000479501 NME2P1O60361 137 aa12.84□□□□□ -0.35
COL20A1-206ENST00000479501 PTP4A3O75365 173 aa12.84□□□□□ -0.35
COL20A1-206ENST00000479501 IGKV1D-16P01601 117 aa12.84□□□□□ -0.35
COL20A1-206ENST00000479501 HNF4GQ14541 408 aa12.84□□□□□ -0.35
COL20A1-206ENST00000479501 ZNF239Q16600 458 aaKnown RBP12.84□□□□□ -0.35
COL20A1-206ENST00000479501 HPSE2Q8WWQ2 592 aa12.84□□□□□ -0.35
COL20A1-206ENST00000479501 DNAJB11Q9UBS4 358 aa12.84□□□□□ -0.35
COL20A1-206ENST00000479501 LHX6Q9UPM6 363 aa12.84□□□□□ -0.35
COL20A1-206ENST00000479501 TAAR5O14804 337 aa12.83□□□□□ -0.35
COL20A1-206ENST00000479501 PHF1O43189 567 aaPredicted RBP12.83□□□□□ -0.35
COL20A1-206ENST00000479501 CYTIPO60759 359 aa12.83□□□□□ -0.35
COL20A1-206ENST00000479501 WNT1P04628 370 aa12.83□□□□□ -0.35
COL20A1-206ENST00000479501 TRA2AQ13595 282 aaKnown RBP eCLIP12.83□□□□□ -0.35
COL20A1-206ENST00000479501 WDR74Q6RFH5 385 aaPredicted RBP12.83□□□□□ -0.35
COL20A1-206ENST00000479501 TSEN54Q7Z6J9 526 aaKnown RBP12.83□□□□□ -0.35
COL20A1-206ENST00000479501 SUMF1Q8NBK3 374 aa12.83□□□□□ -0.35
COL20A1-206ENST00000479501 NUBPLQ8TB37 319 aa12.83□□□□□ -0.35
COL20A1-206ENST00000479501 KCNE4Q8WWG9 221 aa12.83□□□□□ -0.35
COL20A1-206ENST00000479501 GVINP1Q7Z2Y8 2422 aa12.83□□□□□ -0.35
COL20A1-206ENST00000479501 SCN2AQ99250 2005 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 TRAV20A0A0B4J274 112 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 TNFSF11O14788 317 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 GNB3P16520 340 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 SNRPNP63162 240 aaKnown RBP12.83□□□□□ -0.36
COL20A1-206ENST00000479501 SRPXP78539 464 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 ADIRFQ15847 76 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 MESTQ5EB52 335 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 DMRTC1Q5HYR2 192 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 OR2I1PQ8NGU4 316 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 OR2G3Q8NGZ4 309 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 INTS12Q96CB8 462 aaKnown RBP12.83□□□□□ -0.36
COL20A1-206ENST00000479501 NKX3-1Q99801 234 aaPredicted RBP12.83□□□□□ -0.36
COL20A1-206ENST00000479501 ARRDC1-AS1Q9H2J1 176 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 SMIM10L1P0DMW3 83 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 SSBP1Q04837 148 aaKnown RBP12.83□□□□□ -0.36
COL20A1-206ENST00000479501 TESK1Q15569 626 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 BHLHE23Q8NDY6 225 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 DUSP18Q8NEJ0 188 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 SMIM10Q96HG1 83 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 OR14J1Q9UGF5 321 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 MEIKINA0A087WXM9 373 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 ZNF724A8MTY0 619 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 ST8SIA3O43173 380 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 HPNP05981 417 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 H2AFB1P0C5Y9 115 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 GLI4P10075 376 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 RAB11AP62491 216 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms