RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 KDM8Q8N371 416 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 OR5K2Q8NHB8 316 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 RNF166Q96A37 237 aaPredicted RBP11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 SLC25A31Q9H0C2 315 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 TCEAL2Q9H3H9 227 aaPredicted RBP11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 PDE7BQ9NP56 450 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 LUZP4Q9P127 313 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 B4GALT6Q9UBX8 382 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 CHRNA9Q9UGM1 479 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 APOBEC3BQ9UH17 382 aaKnown RBP11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 CD84Q9UIB8 345 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 ATG4BQ9Y4P1 393 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 CACNA1BQ00975 2339 aa11.73□□□□□ -0.53
CNKSR3-204ENST00000479339 TMEM235A6NFC5 223 aa11.73□□□□□ -0.53
CNKSR3-204ENST00000479339 PHOX2AO14813 284 aa11.73□□□□□ -0.53
CNKSR3-204ENST00000479339 NUDT21O43809 227 aaKnown RBP11.73□□□□□ -0.53
CNKSR3-204ENST00000479339 ERCC1P07992 297 aaPredicted RBP11.73□□□□□ -0.53
CNKSR3-204ENST00000479339 ELFN1P0C7U0 828 aa11.73□□□□□ -0.53
CNKSR3-204ENST00000479339 LIPCP11150 499 aa11.73□□□□□ -0.53
CNKSR3-204ENST00000479339 PDX1P52945 283 aa11.73□□□□□ -0.53
CNKSR3-204ENST00000479339 SUCLG1P53597 346 aaKnown RBP11.73□□□□□ -0.53
CNKSR3-204ENST00000479339 DUSP8Q13202 625 aa11.73□□□□□ -0.53
CNKSR3-204ENST00000479339 ELOBQ15370 118 aa11.73□□□□□ -0.53
CNKSR3-204ENST00000479339 CDCP2Q5VXM1 449 aa11.73□□□□□ -0.53
CNKSR3-204ENST00000479339 OR2T2Q6IF00 324 aa11.73□□□□□ -0.53
CNKSR3-204ENST00000479339 LANCL3Q6ZV70 420 aa11.73□□□□□ -0.53
CNKSR3-204ENST00000479339 TTLL10Q6ZVT0 673 aa11.73□□□□□ -0.53
CNKSR3-204ENST00000479339 NUP43Q8NFH3 380 aa11.73□□□□□ -0.53
CNKSR3-204ENST00000479339 SLC41A2Q96JW4 573 aa11.73□□□□□ -0.53
CNKSR3-204ENST00000479339 LRRC61Q9BV99 259 aa11.73□□□□□ -0.53
CNKSR3-204ENST00000479339 CRLF2Q9HC73 371 aa11.73□□□□□ -0.53
CNKSR3-204ENST00000479339 AMDHD2Q9Y303 409 aa11.73□□□□□ -0.53
CNKSR3-204ENST00000479339 MEMO1Q9Y316 297 aa11.73□□□□□ -0.53
CNKSR3-204ENST00000479339 STRAPQ9Y3F4 350 aaKnown RBP11.73□□□□□ -0.53
CNKSR3-204ENST00000479339 AKAP13Q12802 2813 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 FRYQ5TBA9 3013 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 LMO7DNF2Z398 122 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 ZNF354AO60765 605 aaPredicted RBP11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 GCGP01275 180 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 PCCBP05166 539 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 PTNP21246 168 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 BLKP51451 505 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 EBPQ15125 230 aaKnown RBP11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 OR4C11Q6IEV9 310 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 FAM166AQ6J272 317 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 ZNF627Q7L945 461 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 C17orf64Q86WR6 236 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 ZNF664Q8N3J9 261 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 LILRA3Q8N6C8 439 aaPredicted RBP11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 OR51A7Q8NH64 312 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 ADAMTS15Q8TE58 950 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 DTD1Q8TEA8 209 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 MCHR2Q969V1 340 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 TMEM106AQ96A25 262 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 POM121Q96HA1 1249 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 CCNL2Q96S94 520 aaPredicted RBP11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 HIST1H2BLQ99880 126 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 DPEP2Q9H4A9 486 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 OR5AC2Q9NZP5 309 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 OR14J1Q9UGF5 321 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 PITPNC1Q9UKF7 332 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 TCFL5Q9UL49 500 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 UPK3AO75631 287 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 ZIC2O95409 532 aaPredicted RBP11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 MT-CO3P00414 261 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 OR5AC1P0C628 307 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 CD37P11049 281 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 ZNF28P17035 718 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 AK4P27144 223 aaPredicted RBP11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 TDGF1P3P51864 188 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 REEP5Q00765 189 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 RTP5Q14D33 572 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 ZNHIT3Q15649 155 aaPredicted RBP11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 ISXQ2M1V0 245 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 DEFB133Q30KQ1 61 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 SOHLH1Q5JUK2 328 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 MDGA2Q7Z553 956 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 ZNF563Q8TA94 476 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 ZNF587Q96SQ5 575 aaPredicted RBP11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 ASCL3Q9NQ33 180 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 TMED7Q9Y3B3 224 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 WDR45Q9Y484 360 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 MMP24Q9Y5R2 645 aa11.72□□□□□ -0.53
CNKSR3-204ENST00000479339 A0A087WZY1 265 aa11.71□□□□□ -0.53
CNKSR3-204ENST00000479339 DFFBO76075 338 aa11.71□□□□□ -0.53
CNKSR3-204ENST00000479339 NDUFB2O95178 105 aa11.71□□□□□ -0.53
CNKSR3-204ENST00000479339 SEC11BP0C7V7 166 aa11.71□□□□□ -0.53
CNKSR3-204ENST00000479339 GZMBP10144 247 aa11.71□□□□□ -0.53
CNKSR3-204ENST00000479339 MYF5P13349 255 aa11.71□□□□□ -0.53
CNKSR3-204ENST00000479339 HIST1H1CP16403 213 aaKnown RBP11.71□□□□□ -0.53
CNKSR3-204ENST00000479339 CSNK2A2P19784 350 aaPredicted RBP11.71□□□□□ -0.53
CNKSR3-204ENST00000479339 RASGEF1BQ0VAM2 473 aa11.71□□□□□ -0.53
CNKSR3-204ENST00000479339 C1orf61Q13536 156 aa11.71□□□□□ -0.53
CNKSR3-204ENST00000479339 ZNF658BQ4V348 819 aaPredicted RBP11.71□□□□□ -0.53
CNKSR3-204ENST00000479339 ZNF283Q8N7M2 679 aa11.71□□□□□ -0.53
CNKSR3-204ENST00000479339 ZNF615Q8N8J6 731 aa11.71□□□□□ -0.53
CNKSR3-204ENST00000479339 SUMF2Q8NBJ7 301 aa11.71□□□□□ -0.53
CNKSR3-204ENST00000479339 OR4K13Q8NH42 304 aa11.71□□□□□ -0.53
CNKSR3-204ENST00000479339 IFI44Q8TCB0 444 aa11.71□□□□□ -0.53
CNKSR3-204ENST00000479339 Q8WTZ3 238 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms