RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 OR56B2PQ8NGI1 322 aa13.07□□□□□ -0.32
C9orf3-217ENST00000479161 ITLN1Q8WWA0 313 aa13.07□□□□□ -0.32
C9orf3-217ENST00000479161 MRM2Q9UI43 246 aaKnown RBP13.07□□□□□ -0.32
C9orf3-217ENST00000479161 WIPI2Q9Y4P8 454 aa13.07□□□□□ -0.32
C9orf3-217ENST00000479161 MPC1Q9Y5U8 109 aa13.07□□□□□ -0.32
C9orf3-217ENST00000479161 R4GMQ9 66 aa13.07□□□□□ -0.32
C9orf3-217ENST00000479161 HSPE1-MOB4S4R3N1 261 aa13.07□□□□□ -0.32
C9orf3-217ENST00000479161 NAV3Q8IVL0 2385 aa13.06□□□□□ -0.32
C9orf3-217ENST00000479161 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.06□□□□□ -0.32
C9orf3-217ENST00000479161 A0A1W2PQL4 384 aaPredicted RBP13.06□□□□□ -0.32
C9orf3-217ENST00000479161 METTL15A6NJ78 407 aa13.06□□□□□ -0.32
C9orf3-217ENST00000479161 DHRS7CA6NNS2 312 aa13.06□□□□□ -0.32
C9orf3-217ENST00000479161 ANKRD30BLA7E2S9 258 aa13.06□□□□□ -0.32
C9orf3-217ENST00000479161 H0YAE9 185 aa13.06□□□□□ -0.32
C9orf3-217ENST00000479161 H0YJX3 145 aa13.06□□□□□ -0.32
C9orf3-217ENST00000479161 CST4P01036 141 aa13.06□□□□□ -0.32
C9orf3-217ENST00000479161 KRT8P05787 483 aa13.06□□□□□ -0.32
C9orf3-217ENST00000479161 LMO4P61968 165 aa13.06□□□□□ -0.32
C9orf3-217ENST00000479161 MAB21L1Q13394 359 aa13.06□□□□□ -0.32
C9orf3-217ENST00000479161 OR8G1Q15617 311 aa13.06□□□□□ -0.32
C9orf3-217ENST00000479161 KRTAP21-3Q3LHN1 58 aa13.06□□□□□ -0.32
C9orf3-217ENST00000479161 TMEM155Q4W5P6 130 aa13.06□□□□□ -0.32
C9orf3-217ENST00000479161 C6orf52Q5T4I8 152 aa13.06□□□□□ -0.32
C9orf3-217ENST00000479161 ELMOD2Q8IZ81 293 aa13.06□□□□□ -0.32
C9orf3-217ENST00000479161 C1orf87Q8N0U7 546 aa13.06□□□□□ -0.32
C9orf3-217ENST00000479161 ACBD7Q8N6N7 88 aa13.06□□□□□ -0.32
C9orf3-217ENST00000479161 CCDC54Q8NEL0 328 aa13.06□□□□□ -0.32
C9orf3-217ENST00000479161 SIGLEC11Q96RL6 698 aa13.06□□□□□ -0.32
C9orf3-217ENST00000479161 PBOV1Q9GZY1 135 aa13.06□□□□□ -0.32
C9orf3-217ENST00000479161 INPP5EQ9NRR6 644 aa13.06□□□□□ -0.32
C9orf3-217ENST00000479161 C14orf119Q9NWQ9 140 aa13.06□□□□□ -0.32
C9orf3-217ENST00000479161 IKZF2Q9UKS7 526 aa13.06□□□□□ -0.32
C9orf3-217ENST00000479161 SNX5Q9Y5X3 404 aa13.06□□□□□ -0.32
C9orf3-217ENST00000479161 NPTNQ9Y639 398 aa13.06□□□□□ -0.32
C9orf3-217ENST00000479161 WNK2Q9Y3S1 2297 aa13.05□□□□□ -0.32
C9orf3-217ENST00000479161 LRRC30A6NM36 301 aa13.05□□□□□ -0.32
C9orf3-217ENST00000479161 B4DSR2 109 aa13.05□□□□□ -0.32
C9orf3-217ENST00000479161 ANKRD65E5RJM6 399 aa13.05□□□□□ -0.32
C9orf3-217ENST00000479161 H0YL77 283 aa13.05□□□□□ -0.32
C9orf3-217ENST00000479161 TMEM178BH3BS89 294 aa13.05□□□□□ -0.32
C9orf3-217ENST00000479161 MTRF1O75570 445 aaKnown RBP13.05□□□□□ -0.32
C9orf3-217ENST00000479161 CA6P23280 308 aa13.05□□□□□ -0.32
C9orf3-217ENST00000479161 PEX2P28328 305 aa13.05□□□□□ -0.32
C9orf3-217ENST00000479161 MAP2K3P46734 347 aa13.05□□□□□ -0.32
C9orf3-217ENST00000479161 ADARB1P78563 741 aaKnown RBP13.05□□□□□ -0.32
C9orf3-217ENST00000479161 RAB40BQ12829 278 aa13.05□□□□□ -0.32
C9orf3-217ENST00000479161 SPRNQ5BIV9 151 aa13.05□□□□□ -0.32
C9orf3-217ENST00000479161 ZNF691Q5VV52 312 aa13.05□□□□□ -0.32
C9orf3-217ENST00000479161 LRRC28Q86X40 367 aaPredicted RBP13.05□□□□□ -0.32
C9orf3-217ENST00000479161 DHRSXQ8N5I4 330 aa13.05□□□□□ -0.32
C9orf3-217ENST00000479161 SETD9Q8NE22 299 aa13.05□□□□□ -0.32
C9orf3-217ENST00000479161 OR10AD1Q8NGE0 317 aa13.05□□□□□ -0.32
C9orf3-217ENST00000479161 CLDND2Q8NHS1 167 aa13.05□□□□□ -0.32
C9orf3-217ENST00000479161 RAB39BQ96DA2 213 aa13.05□□□□□ -0.32
C9orf3-217ENST00000479161 MSI2Q96DH6 328 aaKnown RBP13.05□□□□□ -0.32
C9orf3-217ENST00000479161 RNFT2Q96EX2 444 aa13.05□□□□□ -0.32
C9orf3-217ENST00000479161 MRPL48Q96GC5 212 aaKnown RBP13.05□□□□□ -0.32
C9orf3-217ENST00000479161 VCXQ9H320 206 aa13.05□□□□□ -0.32
C9orf3-217ENST00000479161 G6PC2Q9NQR9 355 aa13.05□□□□□ -0.32
C9orf3-217ENST00000479161 RPL36Q9Y3U8 105 aaKnown RBP13.05□□□□□ -0.32
C9orf3-217ENST00000479161 CACNG2Q9Y698 323 aa13.05□□□□□ -0.32
C9orf3-217ENST00000479161 A8MV72 311 aaPredicted RBP13.04□□□□□ -0.32
C9orf3-217ENST00000479161 F5H5P2 479 aa13.04□□□□□ -0.32
C9orf3-217ENST00000479161 LOC110117498-PIK3R3F6TDL0 507 aa13.04□□□□□ -0.32
C9orf3-217ENST00000479161 FADS2O95864 444 aaKnown RBP13.04□□□□□ -0.32
C9orf3-217ENST00000479161 PNPP00491 289 aa13.04□□□□□ -0.32
C9orf3-217ENST00000479161 IGHV2-70P01814 119 aa13.04□□□□□ -0.32
C9orf3-217ENST00000479161 IGHA1P01876 353 aa13.04□□□□□ -0.32
C9orf3-217ENST00000479161 TTRP02766 147 aa13.04□□□□□ -0.32
C9orf3-217ENST00000479161 HLA-DPB1P04440 258 aa13.04□□□□□ -0.32
C9orf3-217ENST00000479161 RPSAP08865 295 aaKnown RBP13.04□□□□□ -0.32
C9orf3-217ENST00000479161 DBTP11182 482 aaKnown RBP13.04□□□□□ -0.32
C9orf3-217ENST00000479161 CFHR2P36980 270 aa13.04□□□□□ -0.32
C9orf3-217ENST00000479161 CDH15P55291 814 aa13.04□□□□□ -0.32
C9orf3-217ENST00000479161 IL5RAQ01344 420 aa13.04□□□□□ -0.32
C9orf3-217ENST00000479161 SLC34A1Q06495 639 aa13.04□□□□□ -0.32
C9orf3-217ENST00000479161 CDONQ4KMG0 1287 aa13.04□□□□□ -0.32
C9orf3-217ENST00000479161 KLHL22Q53GT1 634 aa13.04□□□□□ -0.32
C9orf3-217ENST00000479161 FAM76BQ5HYJ3 339 aa13.04□□□□□ -0.32
C9orf3-217ENST00000479161 LIPNQ5VXI9 398 aa13.04□□□□□ -0.32
C9orf3-217ENST00000479161 FDX2Q6P4F2 183 aa13.04□□□□□ -0.32
C9orf3-217ENST00000479161 MUC20Q8N307 709 aaPredicted RBP13.04□□□□□ -0.32
C9orf3-217ENST00000479161 GALNT4Q8N4A0 578 aa13.04□□□□□ -0.32
C9orf3-217ENST00000479161 RFLNBQ8N5W9 214 aa13.04□□□□□ -0.32
C9orf3-217ENST00000479161 LINC01356Q8N9X3 169 aa13.04□□□□□ -0.32
C9orf3-217ENST00000479161 OR10H4Q8NGA5 316 aa13.04□□□□□ -0.32
C9orf3-217ENST00000479161 HAVCR2Q8TDQ0 301 aa13.04□□□□□ -0.32
C9orf3-217ENST00000479161 LYZL4Q96KX0 146 aa13.04□□□□□ -0.32
C9orf3-217ENST00000479161 ADAT1Q9BUB4 502 aaKnown RBP13.04□□□□□ -0.32
C9orf3-217ENST00000479161 JAM3Q9BX67 310 aa13.04□□□□□ -0.32
C9orf3-217ENST00000479161 BRD7Q9NPI1 651 aa13.04□□□□□ -0.32
C9orf3-217ENST00000479161 N6AMT1Q9Y5N5 214 aa13.04□□□□□ -0.32
C9orf3-217ENST00000479161 ANK3Q12955 4377 aaKnown RBP13.04□□□□□ -0.32
C9orf3-217ENST00000479161 LRP5LA4QPB2 252 aa13.03□□□□□ -0.32
C9orf3-217ENST00000479161 H0YHG0 523 aa13.03□□□□□ -0.32
C9orf3-217ENST00000479161 PSMD9O00233 223 aa13.03□□□□□ -0.32
C9orf3-217ENST00000479161 PCMT1P22061 227 aa13.03□□□□□ -0.32
C9orf3-217ENST00000479161 CCL1P22362 96 aa13.03□□□□□ -0.32
C9orf3-217ENST00000479161 BTG1P62324 171 aa13.03□□□□□ -0.32
C9orf3-217ENST00000479161 ACTA2P62736 377 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms