RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 ZNF250P15622 560 aa11.22□□□□□ -0.61
CHD3-210ENST00000479080 FAHP16930 419 aa11.22□□□□□ -0.61
CHD3-210ENST00000479080 IGFBP3P17936 291 aaPredicted RBP11.22□□□□□ -0.61
CHD3-210ENST00000479080 NCS1P62166 190 aa11.22□□□□□ -0.61
CHD3-210ENST00000479080 LSM3P62310 102 aaKnown RBP11.22□□□□□ -0.61
CHD3-210ENST00000479080 ADIPOQQ15848 244 aa11.22□□□□□ -0.61
CHD3-210ENST00000479080 Q499Y3 187 aa11.22□□□□□ -0.61
CHD3-210ENST00000479080 MBNL2Q5VZF2 373 aaKnown RBP11.22□□□□□ -0.61
CHD3-210ENST00000479080 TMEM42Q69YG0 159 aa11.22□□□□□ -0.61
CHD3-210ENST00000479080 C22orf42Q6IC83 251 aa11.22□□□□□ -0.61
CHD3-210ENST00000479080 OR2T2Q6IF00 324 aa11.22□□□□□ -0.61
CHD3-210ENST00000479080 ZNF544Q6NX49 715 aa11.22□□□□□ -0.61
CHD3-210ENST00000479080 ZNF529Q6P280 563 aa11.22□□□□□ -0.61
CHD3-210ENST00000479080 CRIP3Q6Q6R5 217 aa11.22□□□□□ -0.61
CHD3-210ENST00000479080 VHLLQ6RSH7 139 aa11.22□□□□□ -0.61
CHD3-210ENST00000479080 SLC22A25Q6T423 547 aa11.22□□□□□ -0.61
CHD3-210ENST00000479080 MS4A15Q8N5U1 240 aa11.22□□□□□ -0.61
CHD3-210ENST00000479080 UBASH3BQ8TF42 649 aa11.22□□□□□ -0.61
CHD3-210ENST00000479080 AKAP1Q92667 903 aaKnown RBP eCLIP11.22□□□□□ -0.61
CHD3-210ENST00000479080 HAVCR1Q96D42 359 aa11.22□□□□□ -0.61
CHD3-210ENST00000479080 GFI1Q99684 422 aa11.22□□□□□ -0.61
CHD3-210ENST00000479080 SLC30A2Q9BRI3 323 aa11.22□□□□□ -0.61
CHD3-210ENST00000479080 MRPL37Q9BZE1 423 aaKnown RBP11.22□□□□□ -0.61
CHD3-210ENST00000479080 RGCCQ9H4X1 137 aa11.22□□□□□ -0.61
CHD3-210ENST00000479080 ESRP2Q9H6T0 727 aaKnown RBP11.22□□□□□ -0.61
CHD3-210ENST00000479080 NGBQ9NPG2 151 aa11.22□□□□□ -0.61
CHD3-210ENST00000479080 CA10Q9NS85 328 aa11.22□□□□□ -0.61
CHD3-210ENST00000479080 RNF115Q9Y4L5 304 aa11.22□□□□□ -0.61
CHD3-210ENST00000479080 HRNRQ86YZ3 2850 aaPredicted RBP11.22□□□□□ -0.61
CHD3-210ENST00000479080 IGKV1-9A0A0C4DH69 117 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 CD300LBA8K4G0 201 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 AIREO43918 545 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 HLA-DPB1P04440 258 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 OCM2P0CE71 109 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 RAC2P15153 192 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 ADRA2CP18825 462 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 KITLGP21583 273 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 PSMA1P25786 263 aaKnown RBP11.21□□□□□ -0.61
CHD3-210ENST00000479080 COL8A1P27658 744 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 FGF9P31371 208 aaPredicted RBP11.21□□□□□ -0.61
CHD3-210ENST00000479080 PEX19P40855 299 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 RAD52P43351 418 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 DMRTC1Q5HYR2 192 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 RGS7BPQ6MZT1 257 aaPredicted RBP11.21□□□□□ -0.61
CHD3-210ENST00000479080 Q6ZR03 302 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 PGAP1Q75T13 922 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 MRPL21Q7Z2W9 205 aaKnown RBP11.21□□□□□ -0.61
CHD3-210ENST00000479080 CEACAM19Q7Z692 300 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 LRRTM1Q86UE6 522 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 NR2C2APQ86WQ0 139 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 COMMD2Q86X83 199 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 OR5AS1Q8N127 324 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 PARP16Q8N5Y8 322 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 OR51A2Q8NGJ7 313 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 OR13C3Q8NGS6 347 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 TSEN15Q8WW01 171 aaKnown RBP11.21□□□□□ -0.61
CHD3-210ENST00000479080 DVL3Q92997 716 aaPredicted RBP11.21□□□□□ -0.61
CHD3-210ENST00000479080 TMEM106AQ96A25 262 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 FGGYQ96C11 551 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 ISOC1Q96CN7 298 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 ZNF442Q9H7R0 627 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 TAS2R4Q9NYW5 299 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 ZNF391Q9UJN7 358 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 PURGQ9UJV8 347 aaKnown RBP11.21□□□□□ -0.61
CHD3-210ENST00000479080 DHDHQ9UQ10 334 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 RHBDD3Q9Y3P4 386 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 ATP23Q9Y6H3 246 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 LRRK2Q5S007 2527 aa11.21□□□□□ -0.61
CHD3-210ENST00000479080 LOC100506127A0A0U1RQW1 187 aa11.2□□□□□ -0.62
CHD3-210ENST00000479080 TRIM64BA6NI03 449 aa11.2□□□□□ -0.62
CHD3-210ENST00000479080 A6NNC1 897 aa11.2□□□□□ -0.62
CHD3-210ENST00000479080 DHRS7CA6NNS2 312 aa11.2□□□□□ -0.62
CHD3-210ENST00000479080 IQCF6A8MYZ5 107 aa11.2□□□□□ -0.62
CHD3-210ENST00000479080 H3BMQ9 156 aa11.2□□□□□ -0.62
CHD3-210ENST00000479080 CLEC2LP0C7M8 214 aa11.2□□□□□ -0.62
CHD3-210ENST00000479080 FSTP19883 344 aa11.2□□□□□ -0.62
CHD3-210ENST00000479080 GALP22466 123 aa11.2□□□□□ -0.62
CHD3-210ENST00000479080 TTKP33981 857 aa11.2□□□□□ -0.62
CHD3-210ENST00000479080 FABP6P51161 128 aa11.2□□□□□ -0.62
CHD3-210ENST00000479080 VBP1P61758 197 aa11.2□□□□□ -0.62
CHD3-210ENST00000479080 MALLQ13021 153 aa11.2□□□□□ -0.62
CHD3-210ENST00000479080 SPCS2Q15005 226 aa11.2□□□□□ -0.62
CHD3-210ENST00000479080 TRAM1Q15629 374 aa11.2□□□□□ -0.62
CHD3-210ENST00000479080 ZNF672Q499Z4 452 aaPredicted RBP11.2□□□□□ -0.62
CHD3-210ENST00000479080 LYPD6Q86Y78 171 aa11.2□□□□□ -0.62
CHD3-210ENST00000479080 SEMA6DQ8NFY4 1073 aa11.2□□□□□ -0.62
CHD3-210ENST00000479080 NDNFQ8TB73 568 aa11.2□□□□□ -0.62
CHD3-210ENST00000479080 HPSE2Q8WWQ2 592 aa11.2□□□□□ -0.62
CHD3-210ENST00000479080 MRPL24Q96A35 216 aaKnown RBP11.2□□□□□ -0.62
CHD3-210ENST00000479080 PSMG3-AS1Q96PY0 264 aa11.2□□□□□ -0.62
CHD3-210ENST00000479080 SYT3Q9BQG1 590 aa11.2□□□□□ -0.62
CHD3-210ENST00000479080 OPA3Q9H6K4 179 aa11.2□□□□□ -0.62
CHD3-210ENST00000479080 EXOSC4Q9NPD3 245 aaKnown RBP11.2□□□□□ -0.62
CHD3-210ENST00000479080 GPR160Q9UJ42 338 aa11.2□□□□□ -0.62
CHD3-210ENST00000479080 PIGLQ9Y2B2 252 aa11.2□□□□□ -0.62
CHD3-210ENST00000479080 A0A0G2JK05 382 aa11.19□□□□□ -0.62
CHD3-210ENST00000479080 A0A1B0GWJ7 208 aa11.19□□□□□ -0.62
CHD3-210ENST00000479080 CASKO14936 926 aa11.19□□□□□ -0.62
CHD3-210ENST00000479080 GATBO75879 557 aaKnown RBP11.19□□□□□ -0.62
CHD3-210ENST00000479080 IGHV3-13P01766 116 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms