RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 RAB12Q6IQ22 244 aa-0.85□□□□□ -2.55
CALD1-218ENST00000478075 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP-0.85□□□□□ -2.55
CALD1-218ENST00000478075 LRRC74BQ6ZQY2 392 aa-0.85□□□□□ -2.55
CALD1-218ENST00000478075 SLC16A14Q7RTX9 510 aa-0.85□□□□□ -2.55
CALD1-218ENST00000478075 COMTD1Q86VU5 262 aa-0.85□□□□□ -2.55
CALD1-218ENST00000478075 BBS7Q8IWZ6 715 aa-0.85□□□□□ -2.55
CALD1-218ENST00000478075 HS3ST5Q8IZT8 346 aa-0.85□□□□□ -2.55
CALD1-218ENST00000478075 CLEC4FQ8N1N0 589 aa-0.85□□□□□ -2.55
CALD1-218ENST00000478075 METTL13Q8N6R0 699 aa-0.85□□□□□ -2.55
CALD1-218ENST00000478075 C9orf163Q8N9P6 203 aa-0.85□□□□□ -2.55
CALD1-218ENST00000478075 C11orf72Q8NBR9 251 aa-0.85□□□□□ -2.55
CALD1-218ENST00000478075 UFD1Q92890 307 aa-0.85□□□□□ -2.55
CALD1-218ENST00000478075 APH1AQ96BI3 265 aa-0.85□□□□□ -2.55
CALD1-218ENST00000478075 BTN2A3PQ96KV6 586 aa-0.85□□□□□ -2.55
CALD1-218ENST00000478075 RNF2Q99496 336 aa-0.85□□□□□ -2.55
CALD1-218ENST00000478075 ZNF426Q9BUY5 554 aa-0.85□□□□□ -2.55
CALD1-218ENST00000478075 UFSP2Q9NUQ7 469 aa-0.85□□□□□ -2.55
CALD1-218ENST00000478075 HMG20BQ9P0W2 317 aa-0.85□□□□□ -2.55
CALD1-218ENST00000478075 PRO2289Q9P1D8 64 aa-0.85□□□□□ -2.55
CALD1-218ENST00000478075 RWDD2AQ9UIY3 292 aa-0.85□□□□□ -2.55
CALD1-218ENST00000478075 MEMO1Q9Y316 297 aa-0.85□□□□□ -2.55
CALD1-218ENST00000478075 LRRC42Q9Y546 428 aa-0.85□□□□□ -2.55
CALD1-218ENST00000478075 PLECQ15149 4684 aaKnown RBP-0.85□□□□□ -2.55
CALD1-218ENST00000478075 CHD8Q9HCK8 2581 aa-0.85□□□□□ -2.55
CALD1-218ENST00000478075 AK9Q5TCS8 1911 aa-0.85□□□□□ -2.55
CALD1-218ENST00000478075 FAT3Q8TDW7 4589 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 UBE4BO95155 1302 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 WDR90Q96KV7 1748 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 LAMA1P25391 3075 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 COL12A1Q99715 3063 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 A0A087WX48 190 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 A0A0B4J2C4 111 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 LOC100653049A0A140TA62 436 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 GMNCA6NCL1 334 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 OR6C74A6NCV1 312 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 OR2T8A6NH00 312 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 ZNF705FA8MVS1 300 aaPredicted RBP-0.86□□□□□ -2.55
CALD1-218ENST00000478075 F8W036 122 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 CHMP2AO43633 222 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 ZNF737O75373 536 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 SEC22BO75396 215 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 KRT34O76011 436 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 AQP8O94778 261 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 KCNK2O95069 426 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 OXSR1O95747 527 aaPredicted RBP-0.86□□□□□ -2.55
CALD1-218ENST00000478075 SOD3P08294 240 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 RRASP10301 218 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 ALOX5APP20292 161 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 PSMB9P28065 219 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 CD70P32970 193 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 P2RY2P41231 377 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 HCAR3P49019 387 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 CEBPDP49716 269 aaPredicted RBP-0.86□□□□□ -2.55
CALD1-218ENST00000478075 ETV1P50549 477 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 RAP1GDS1P52306 607 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 FOXA3P55318 350 aaPredicted RBP-0.86□□□□□ -2.55
CALD1-218ENST00000478075 FXYD6P3P58550 94 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 SLC26A5P58743 744 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 TSPAN31Q12999 210 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 BTN1A1Q13410 526 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 ILKQ13418 452 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 OR5I1Q13606 314 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 ZBTB6Q15916 424 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 C4orf26Q17RF5 130 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 FILIP1LQ4L180 1135 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 C10orf55Q5SWW7 151 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 CENPPQ6IPU0 288 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 NOXRED1Q6NXP6 359 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 CD300LGQ6UXG3 332 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 LINC00575Q6W349 94 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 DPY19L4Q7Z388 723 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 TAF8Q7Z7C8 310 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 RPS19BP1Q86WX3 136 aaKnown RBP-0.86□□□□□ -2.55
CALD1-218ENST00000478075 PRR15Q8IV56 129 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 CCDC65Q8IXS2 484 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 CPNE9Q8IYJ1 553 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 LINC00471Q8N535 108 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 OR4X2Q8NGF9 303 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 OR5T3Q8NGG3 340 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 OR4D6Q8NGJ1 314 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 OR10J6PQ8NGY7 276 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 OR8K3Q8NH51 312 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 ASB17Q8WXJ9 295 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 TMBIM1Q969X1 311 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 EEF1AKMT3Q96AZ1 226 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 MRPL38Q96DV4 380 aaKnown RBP-0.86□□□□□ -2.55
CALD1-218ENST00000478075 MRPS24Q96EL2 167 aaKnown RBP-0.86□□□□□ -2.55
CALD1-218ENST00000478075 SAMD8Q96LT4 415 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 TTC25Q96NG3 672 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 VPS35Q96QK1 796 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 Q9BRP9 147 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 CHST5Q9GZS9 411 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 TMEM38AQ9H6F2 299 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 RDH14Q9HBH5 336 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 ADAP2Q9NPF8 381 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 RPRD1BQ9NQG5 326 aaKnown RBP-0.86□□□□□ -2.55
CALD1-218ENST00000478075 INIPQ9NRY2 104 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 TAS2R9Q9NYW1 312 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 PCSK1NQ9UHG2 260 aa-0.86□□□□□ -2.55
CALD1-218ENST00000478075 ADAM28Q9UKQ2 775 aa-0.86□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms