RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 RDH10Q8IZV5 341 aa9.79□□□□□ -0.84
CBWD3-206ENST00000478048 ZCCHC24Q8N2G6 241 aaKnown RBP9.79□□□□□ -0.84
CBWD3-206ENST00000478048 BHLHE23Q8NDY6 225 aa9.79□□□□□ -0.84
CBWD3-206ENST00000478048 POM121Q96HA1 1249 aa9.79□□□□□ -0.84
CBWD3-206ENST00000478048 LURAP1Q96LR2 239 aa9.79□□□□□ -0.84
CBWD3-206ENST00000478048 CCL19Q99731 98 aa9.79□□□□□ -0.84
CBWD3-206ENST00000478048 YTHDF1Q9BYJ9 559 aaKnown RBP9.79□□□□□ -0.84
CBWD3-206ENST00000478048 MOB1AQ9H8S9 216 aa9.79□□□□□ -0.84
CBWD3-206ENST00000478048 TUBG2Q9NRH3 451 aa9.79□□□□□ -0.84
CBWD3-206ENST00000478048 BABAM2Q9NXR7 383 aa9.79□□□□□ -0.84
CBWD3-206ENST00000478048 PURGQ9UJV8 347 aaKnown RBP9.79□□□□□ -0.84
CBWD3-206ENST00000478048 ERGIC3Q9Y282 383 aa9.79□□□□□ -0.84
CBWD3-206ENST00000478048 LSM2Q9Y333 95 aaKnown RBP9.79□□□□□ -0.84
CBWD3-206ENST00000478048 SIRT4Q9Y6E7 314 aaPredicted RBP9.79□□□□□ -0.84
CBWD3-206ENST00000478048 A0A0U1RQV5 110 aa9.78□□□□□ -0.84
CBWD3-206ENST00000478048 hCG_38984A0A1B0GV85 526 aa9.78□□□□□ -0.84
CBWD3-206ENST00000478048 H3BSA7 217 aa9.78□□□□□ -0.84
CBWD3-206ENST00000478048 P2RY10O00398 339 aa9.78□□□□□ -0.84
CBWD3-206ENST00000478048 CD53P19397 219 aa9.78□□□□□ -0.84
CBWD3-206ENST00000478048 KITLGP21583 273 aa9.78□□□□□ -0.84
CBWD3-206ENST00000478048 EVX1P49640 407 aa9.78□□□□□ -0.84
CBWD3-206ENST00000478048 MMP15P51511 669 aa9.78□□□□□ -0.84
CBWD3-206ENST00000478048 GBX2P52951 348 aaPredicted RBP9.78□□□□□ -0.84
CBWD3-206ENST00000478048 WNT4P56705 351 aa9.78□□□□□ -0.84
CBWD3-206ENST00000478048 ALKBH1Q13686 389 aaKnown RBP9.78□□□□□ -0.84
CBWD3-206ENST00000478048 ZFP41Q8N8Y5 198 aa9.78□□□□□ -0.84
CBWD3-206ENST00000478048 MYCBPQ99417 103 aaPredicted RBP9.78□□□□□ -0.84
CBWD3-206ENST00000478048 MSL2Q9HCI7 577 aa9.78□□□□□ -0.84
CBWD3-206ENST00000478048 GPR84Q9NQS5 396 aa9.78□□□□□ -0.84
CBWD3-206ENST00000478048 ST6GALNAC2Q9UJ37 374 aa9.78□□□□□ -0.84
CBWD3-206ENST00000478048 CCDC168Q8NDH2 2452 aa9.78□□□□□ -0.84
CBWD3-206ENST00000478048 PDZD2O15018 2839 aa9.77□□□□□ -0.84
CBWD3-206ENST00000478048 A0A1B0GTI1 187 aa9.77□□□□□ -0.85
CBWD3-206ENST00000478048 TRIM64A6NGJ6 449 aa9.77□□□□□ -0.85
CBWD3-206ENST00000478048 OR4C45A6NMZ5 311 aa9.77□□□□□ -0.85
CBWD3-206ENST00000478048 TIMM8AO60220 97 aaPredicted RBP9.77□□□□□ -0.85
CBWD3-206ENST00000478048 NAT2P11245 290 aa9.77□□□□□ -0.85
CBWD3-206ENST00000478048 ACKR3P25106 362 aa9.77□□□□□ -0.85
CBWD3-206ENST00000478048 CHN2P52757 468 aa9.77□□□□□ -0.85
CBWD3-206ENST00000478048 SELENOVP59797 346 aa9.77□□□□□ -0.85
CBWD3-206ENST00000478048 NKPD1Q17RQ9 610 aa9.77□□□□□ -0.85
CBWD3-206ENST00000478048 Q6ZR03 302 aa9.77□□□□□ -0.85
CBWD3-206ENST00000478048 COMMD2Q86X83 199 aa9.77□□□□□ -0.85
CBWD3-206ENST00000478048 EGFL6Q8IUX8 553 aa9.77□□□□□ -0.85
CBWD3-206ENST00000478048 OR56B2PQ8NGI1 322 aa9.77□□□□□ -0.85
CBWD3-206ENST00000478048 FAM71F1Q96KD3 344 aaPredicted RBP9.77□□□□□ -0.85
CBWD3-206ENST00000478048 MND1Q9BWT6 205 aa9.77□□□□□ -0.85
CBWD3-206ENST00000478048 CACNG6Q9BXT2 260 aa9.77□□□□□ -0.85
CBWD3-206ENST00000478048 CHD3Q12873 2000 aaKnown RBP9.77□□□□□ -0.85
CBWD3-206ENST00000478048 TRBV2A0A0J9YWF9 115 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 PNMA8CA0A1B0GUJ8 204 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 GGT3PA6NGU5 568 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 CD300LBA8K4G0 201 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 IQCF6A8MYZ5 107 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 OVOL3O00110 214 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 ZFPL1O95159 310 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 RAF1P04049 648 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 TGM4P49221 684 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 CCR9P51686 369 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 SNRPD2P62316 118 aaKnown RBP9.76□□□□□ -0.85
CBWD3-206ENST00000478048 EMX1Q04741 257 aaPredicted RBP9.76□□□□□ -0.85
CBWD3-206ENST00000478048 CDK5R1Q15078 307 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 MED22Q15528 200 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 OR10AC1Q8NH08 325 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 PDCD1LG2Q9BQ51 273 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 TPK1Q9H3S4 243 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 RGCCQ9H4X1 137 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 PPP1R3EQ9H7J1 279 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 ZSCAN5BA6NJL1 495 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 M0R233 179 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 OGG1O15527 345 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 LMX1BO60663 402 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 NDUFS7O75251 213 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 MRPL28Q13084 256 aaKnown RBP9.76□□□□□ -0.85
CBWD3-206ENST00000478048 SPHARQ15513 63 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 OR8B8Q15620 311 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 KCTD21Q4G0X4 260 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 RPL22L1Q6P5R6 122 aaKnown RBP9.76□□□□□ -0.85
CBWD3-206ENST00000478048 SPARTQ8N0X7 666 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 OR51A4Q8NGJ6 313 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 OR14K1Q8NGZ2 314 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 RPS4Y2Q8TD47 263 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 VRK1Q99986 396 aaPredicted RBP9.76□□□□□ -0.85
CBWD3-206ENST00000478048 OPA3Q9H6K4 179 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 DYNLRB1Q9NP97 96 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 ACOT13Q9NPJ3 140 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 TRIM36Q9NQ86 728 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 ZNF391Q9UJN7 358 aa9.76□□□□□ -0.85
CBWD3-206ENST00000478048 VPS13CQ709C8 3753 aa9.75□□□□□ -0.85
CBWD3-206ENST00000478048 LOC107986453A0A1B0GWG9 222 aa9.75□□□□□ -0.85
CBWD3-206ENST00000478048 A6NIN4 97 aa9.75□□□□□ -0.85
CBWD3-206ENST00000478048 CYSRT1A8MQ03 144 aa9.75□□□□□ -0.85
CBWD3-206ENST00000478048 H0YL77 283 aa9.75□□□□□ -0.85
CBWD3-206ENST00000478048 SPRY3O43610 288 aa9.75□□□□□ -0.85
CBWD3-206ENST00000478048 HLA-DPB1P04440 258 aa9.75□□□□□ -0.85
CBWD3-206ENST00000478048 H2AFB1P0C5Y9 115 aa9.75□□□□□ -0.85
CBWD3-206ENST00000478048 H2AFB2P0C5Z0 115 aa9.75□□□□□ -0.85
CBWD3-206ENST00000478048 UBCP0CG48 685 aaKnown RBP9.75□□□□□ -0.85
CBWD3-206ENST00000478048 SELEP16581 610 aa9.75□□□□□ -0.85
CBWD3-206ENST00000478048 PCMT1P22061 227 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms