RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 SLC16A14Q7RTX9 510 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 NAA40Q86UY6 237 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 SLC25A42Q86VD7 318 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 GPR137CQ8N3F9 429 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 CT55Q8WUE5 264 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 LIN37Q96GY3 246 aaPredicted RBP10.74□□□□□ -0.69
PTPRF-212ENST00000477970 LYZL4Q96KX0 146 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 NKX3-1Q99801 234 aaPredicted RBP10.74□□□□□ -0.69
PTPRF-212ENST00000477970 SRXN1Q9BYN0 137 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 ZNF224Q9NZL3 707 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 PCSK5Q92824 1860 aa10.74□□□□□ -0.69
PTPRF-212ENST00000477970 RPS10-NUDT3A0A1W2PQS6 291 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 CEACAM18A8MTB9 384 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 FOXI3A8MTJ6 420 aaPredicted RBP10.73□□□□□ -0.69
PTPRF-212ENST00000477970 NAT2P11245 290 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 ABOP16442 354 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 CBX5P45973 191 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 OPCMLQ14982 345 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 STK11Q15831 433 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 SGCAQ16586 387 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 RNASE10Q5GAN6 216 aaKnown RBP10.73□□□□□ -0.69
PTPRF-212ENST00000477970 ZNF468Q5VIY5 522 aaPredicted RBP10.73□□□□□ -0.69
PTPRF-212ENST00000477970 JMJD6Q6NYC1 403 aaPredicted RBP10.73□□□□□ -0.69
PTPRF-212ENST00000477970 GLIPR1L1Q6UWM5 242 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 SLC6A7Q99884 636 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 MAB21L2Q9Y586 359 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 LRRC3CA6NJW4 275 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 CXCL2P19875 107 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 ENPP1P22413 925 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 OR3A3P47888 321 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 SEC61A1P61619 476 aaKnown RBP10.73□□□□□ -0.69
PTPRF-212ENST00000477970 EXOSC2Q13868 293 aaKnown RBP10.73□□□□□ -0.69
PTPRF-212ENST00000477970 RAB35Q15286 201 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 GRK1Q15835 563 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 THOC7Q6I9Y2 204 aaKnown RBP10.73□□□□□ -0.69
PTPRF-212ENST00000477970 C12orf45Q8N5I9 185 aaPredicted RBP10.73□□□□□ -0.69
PTPRF-212ENST00000477970 OR56B1Q8NGI3 324 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 CPT1CQ8TCG5 803 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 PGAM5Q96HS1 289 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 UCN2Q96RP3 112 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 CHST5Q9GZS9 411 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 FARSAQ9Y285 508 aaKnown RBP10.73□□□□□ -0.69
PTPRF-212ENST00000477970 ZNF716A6NP11 495 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 LEUTXA8MZ59 168 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 TNFSF11O14788 317 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 SSX5O60225 188 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 TSC22D2O75157 780 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 CRYGSP22914 178 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 CALCRP30988 508 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 RSPO1Q2MKA7 263 aaPredicted RBP10.73□□□□□ -0.69
PTPRF-212ENST00000477970 C4orf46Q504U0 113 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 VAX1Q5SQQ9 334 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 RIPPLY2Q5TAB7 128 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 CRIP3Q6Q6R5 217 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 OR52H1Q8NGJ2 320 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 SPTSSAQ969W0 71 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 SFXN2Q96NB2 322 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 OCSTAMPQ9BR26 566 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 ULBP2Q9BZM5 246 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 CHIAQ9BZP6 476 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 KIF25Q9UIL4 384 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 PCDHGA1Q9Y5H4 931 aa10.73□□□□□ -0.69
PTPRF-212ENST00000477970 LAMA1P25391 3075 aa10.72□□□□□ -0.69
PTPRF-212ENST00000477970 IGKV1-9A0A0C4DH69 117 aa10.72□□□□□ -0.69
PTPRF-212ENST00000477970 M0QYG6 137 aa10.72□□□□□ -0.69
PTPRF-212ENST00000477970 CDK2AP1O14519 115 aa10.72□□□□□ -0.69
PTPRF-212ENST00000477970 MTRF1O75570 445 aaKnown RBP10.72□□□□□ -0.69
PTPRF-212ENST00000477970 WDPCPO95876 746 aa10.72□□□□□ -0.69
PTPRF-212ENST00000477970 HIST1H1DP16402 221 aaKnown RBP10.72□□□□□ -0.69
PTPRF-212ENST00000477970 UBE2MP61081 183 aaKnown RBP10.72□□□□□ -0.69
PTPRF-212ENST00000477970 ARL6IP1Q15041 203 aa10.72□□□□□ -0.69
PTPRF-212ENST00000477970 PPA1Q15181 289 aa10.72□□□□□ -0.69
PTPRF-212ENST00000477970 NRN1LQ496H8 165 aa10.72□□□□□ -0.69
PTPRF-212ENST00000477970 CDCP2Q5VXM1 449 aa10.72□□□□□ -0.69
PTPRF-212ENST00000477970 TNFAIP8L1Q8WVP5 186 aa10.72□□□□□ -0.69
PTPRF-212ENST00000477970 URM1Q9BTM9 101 aaKnown RBP10.72□□□□□ -0.69
PTPRF-212ENST00000477970 DPCDQ9BVM2 203 aaPredicted RBP10.72□□□□□ -0.69
PTPRF-212ENST00000477970 TM2D1Q9BX74 207 aa10.72□□□□□ -0.69
PTPRF-212ENST00000477970 CHST6Q9GZX3 395 aa10.72□□□□□ -0.69
PTPRF-212ENST00000477970 ZNF391Q9UJN7 358 aa10.72□□□□□ -0.69
PTPRF-212ENST00000477970 A0A0A6YYD4 124 aa10.72□□□□□ -0.69
PTPRF-212ENST00000477970 L7N2F9 121 aa10.72□□□□□ -0.69
PTPRF-212ENST00000477970 GOSR2O14653 212 aa10.72□□□□□ -0.69
PTPRF-212ENST00000477970 RPA2P15927 270 aa10.72□□□□□ -0.69
PTPRF-212ENST00000477970 GMFBP60983 142 aa10.72□□□□□ -0.69
PTPRF-212ENST00000477970 C2orf68Q2NKX9 166 aa10.72□□□□□ -0.69
PTPRF-212ENST00000477970 ACER2Q5QJU3 275 aa10.72□□□□□ -0.69
PTPRF-212ENST00000477970 NSUN5P2Q63ZY6 315 aa10.72□□□□□ -0.69
PTPRF-212ENST00000477970 RTL6Q6ICC9 239 aa10.72□□□□□ -0.69
PTPRF-212ENST00000477970 DRAM2Q6UX65 266 aa10.72□□□□□ -0.69
PTPRF-212ENST00000477970 TIPARPQ7Z3E1 657 aaKnown RBP10.72□□□□□ -0.69
PTPRF-212ENST00000477970 PNLDC1Q8NA58 520 aaKnown RBP10.72□□□□□ -0.69
PTPRF-212ENST00000477970 TMEM45BQ96B21 275 aa10.72□□□□□ -0.69
PTPRF-212ENST00000477970 ALPK2Q86TB3 2170 aa10.72□□□□□ -0.69
PTPRF-212ENST00000477970 RFPL4AA6NLU0 287 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 RFPL4AL1F8VTS6 287 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 MFNGO00587 321 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 ZNF35P13682 527 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 CNR1P21554 472 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 ZBTB25P24278 435 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms