RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 TGM4P49221 684 aa16.46■□□□□ 0.23
PDLIM1-202ENST00000477757 SELENOWP63302 87 aa16.46■□□□□ 0.23
PDLIM1-202ENST00000477757 CYLC2Q14093 348 aaPredicted RBP16.46■□□□□ 0.23
PDLIM1-202ENST00000477757 LRRC10Q5BKY1 277 aa16.46■□□□□ 0.23
PDLIM1-202ENST00000477757 PAPD5Q8NDF8 572 aaKnown RBP16.46■□□□□ 0.23
PDLIM1-202ENST00000477757 STON2Q8WXE9 905 aa16.46■□□□□ 0.23
PDLIM1-202ENST00000477757 LZICQ8WZA0 190 aa16.46■□□□□ 0.23
PDLIM1-202ENST00000477757 TLCD1Q96CP7 247 aa16.46■□□□□ 0.23
PDLIM1-202ENST00000477757 ZNF799Q96GE5 643 aa16.46■□□□□ 0.23
PDLIM1-202ENST00000477757 CITED2Q99967 270 aaPredicted RBP16.46■□□□□ 0.23
PDLIM1-202ENST00000477757 MEGF9Q9H1U4 602 aa16.46■□□□□ 0.23
PDLIM1-202ENST00000477757 SIGLEC7Q9Y286 467 aa16.46■□□□□ 0.23
PDLIM1-202ENST00000477757 IER3IP1Q9Y5U9 82 aa16.46■□□□□ 0.23
PDLIM1-202ENST00000477757 EPPK1P58107 5090 aaKnown RBP16.45■□□□□ 0.22
PDLIM1-202ENST00000477757 PTP4A3O75365 173 aa16.45■□□□□ 0.22
PDLIM1-202ENST00000477757 SELLP14151 372 aa16.45■□□□□ 0.22
PDLIM1-202ENST00000477757 AMY2BP19961 511 aa16.45■□□□□ 0.22
PDLIM1-202ENST00000477757 CD33P20138 364 aa16.45■□□□□ 0.22
PDLIM1-202ENST00000477757 GRK5P34947 590 aa16.45■□□□□ 0.22
PDLIM1-202ENST00000477757 RFX4Q33E94 735 aa16.45■□□□□ 0.22
PDLIM1-202ENST00000477757 STUMQ69YW2 141 aa16.45■□□□□ 0.22
PDLIM1-202ENST00000477757 HCP5Q6MZN7 132 aa16.45■□□□□ 0.22
PDLIM1-202ENST00000477757 PGBD2Q6P3X8 592 aa16.45■□□□□ 0.22
PDLIM1-202ENST00000477757 WDR86Q86TI4 376 aa16.45■□□□□ 0.22
PDLIM1-202ENST00000477757 C11orf53Q8IXP5 236 aa16.45■□□□□ 0.22
PDLIM1-202ENST00000477757 Q8N2B8 174 aa16.45■□□□□ 0.22
PDLIM1-202ENST00000477757 OR56B2PQ8NGI1 322 aa16.45■□□□□ 0.22
PDLIM1-202ENST00000477757 H1FXQ92522 213 aaKnown RBP16.45■□□□□ 0.22
PDLIM1-202ENST00000477757 OCSTAMPQ9BR26 566 aa16.45■□□□□ 0.22
PDLIM1-202ENST00000477757 PARD6BQ9BYG5 372 aa16.45■□□□□ 0.22
PDLIM1-202ENST00000477757 ADA2Q9NZK5 511 aa16.45■□□□□ 0.22
PDLIM1-202ENST00000477757 CYB5R1Q9UHQ9 305 aa16.45■□□□□ 0.22
PDLIM1-202ENST00000477757 FXYD6P3P58550 94 aa16.44■□□□□ 0.22
PDLIM1-202ENST00000477757 HABP2Q14520 560 aaPredicted RBP16.44■□□□□ 0.22
PDLIM1-202ENST00000477757 SLC36A3Q495N2 470 aa16.44■□□□□ 0.22
PDLIM1-202ENST00000477757 GLYATL3Q5SZD4 288 aa16.44■□□□□ 0.22
PDLIM1-202ENST00000477757 ATPAF1Q5TC12 328 aaPredicted RBP16.44■□□□□ 0.22
PDLIM1-202ENST00000477757 WDR82Q6UXN9 313 aa16.44■□□□□ 0.22
PDLIM1-202ENST00000477757 OR6V1Q8N148 313 aa16.44■□□□□ 0.22
PDLIM1-202ENST00000477757 OR2AJ1Q8NGZ0 328 aa16.44■□□□□ 0.22
PDLIM1-202ENST00000477757 SPTSSAQ969W0 71 aa16.44■□□□□ 0.22
PDLIM1-202ENST00000477757 SEH1LQ96EE3 360 aa16.44■□□□□ 0.22
PDLIM1-202ENST00000477757 FAM46AQ96IP4 442 aaKnown RBP16.44■□□□□ 0.22
PDLIM1-202ENST00000477757 B9D1Q9UPM9 204 aa16.44■□□□□ 0.22
PDLIM1-202ENST00000477757 SF3B6Q9Y3B4 125 aaKnown RBP16.44■□□□□ 0.22
PDLIM1-202ENST00000477757 OTX1P32242 354 aaPredicted RBP16.43■□□□□ 0.22
PDLIM1-202ENST00000477757 RPS6KA3P51812 740 aa16.43■□□□□ 0.22
PDLIM1-202ENST00000477757 CD69Q07108 199 aa16.43■□□□□ 0.22
PDLIM1-202ENST00000477757 DPY19L2P2Q6ZN68 376 aa16.43■□□□□ 0.22
PDLIM1-202ENST00000477757 VTCN1Q7Z7D3 282 aa16.43■□□□□ 0.22
PDLIM1-202ENST00000477757 OR8S1Q8NH09 359 aa16.43■□□□□ 0.22
PDLIM1-202ENST00000477757 RSRC1Q96IZ7 334 aaKnown RBP16.43■□□□□ 0.22
PDLIM1-202ENST00000477757 MAP6Q96JE9 813 aa16.43■□□□□ 0.22
PDLIM1-202ENST00000477757 DNTTIP1Q9H147 329 aa16.43■□□□□ 0.22
PDLIM1-202ENST00000477757 ANKRD19PQ9H560 264 aa16.43■□□□□ 0.22
PDLIM1-202ENST00000477757 OPA3Q9H6K4 179 aa16.43■□□□□ 0.22
PDLIM1-202ENST00000477757 WI2-2373I1.2A0A1W2PRP0 233 aa16.42■□□□□ 0.22
PDLIM1-202ENST00000477757 NKX6-3A6NJ46 265 aa16.42■□□□□ 0.22
PDLIM1-202ENST00000477757 FAM220BPB1ANY3 271 aa16.42■□□□□ 0.22
PDLIM1-202ENST00000477757 BMXP51813 675 aa16.42■□□□□ 0.22
PDLIM1-202ENST00000477757 CSNK2BP67870 215 aa16.42■□□□□ 0.22
PDLIM1-202ENST00000477757 DEFB121Q5J5C9 76 aa16.42■□□□□ 0.22
PDLIM1-202ENST00000477757 RRM2BQ7LG56 351 aa16.42■□□□□ 0.22
PDLIM1-202ENST00000477757 LNX2Q8N448 690 aa16.42■□□□□ 0.22
PDLIM1-202ENST00000477757 OR1M1Q8NGA1 313 aa16.42■□□□□ 0.22
PDLIM1-202ENST00000477757 NKX3-1Q99801 234 aaPredicted RBP16.42■□□□□ 0.22
PDLIM1-202ENST00000477757 B9D2Q9BPU9 175 aa16.42■□□□□ 0.22
PDLIM1-202ENST00000477757 SRA1Q9HD15 236 aaKnown RBP16.42■□□□□ 0.22
PDLIM1-202ENST00000477757 A0A1W2PQ09 198 aa16.41■□□□□ 0.22
PDLIM1-202ENST00000477757 ANGPTL7O43827 346 aa16.41■□□□□ 0.22
PDLIM1-202ENST00000477757 PAX6P26367 422 aa16.41■□□□□ 0.22
PDLIM1-202ENST00000477757 NAA10P41227 235 aaPredicted RBP16.41■□□□□ 0.22
PDLIM1-202ENST00000477757 BLMHQ13867 455 aa16.41■□□□□ 0.22
PDLIM1-202ENST00000477757 DRAM2Q6UX65 266 aa16.41■□□□□ 0.22
PDLIM1-202ENST00000477757 DPY19L4Q7Z388 723 aa16.41■□□□□ 0.22
PDLIM1-202ENST00000477757 OR5D13Q8NGL4 314 aa16.41■□□□□ 0.22
PDLIM1-202ENST00000477757 OR9Q1Q8NGQ5 310 aa16.41■□□□□ 0.22
PDLIM1-202ENST00000477757 PIFOQ8TCI5 191 aa16.41■□□□□ 0.22
PDLIM1-202ENST00000477757 WNT10AQ9GZT5 417 aa16.41■□□□□ 0.22
PDLIM1-202ENST00000477757 SLC25A10Q9UBX3 287 aaPredicted RBP16.41■□□□□ 0.22
PDLIM1-202ENST00000477757 CAPN7Q9Y6W3 813 aa16.41■□□□□ 0.22
PDLIM1-202ENST00000477757 DYNC2H1Q8NCM8 4307 aaKnown RBP16.4■□□□□ 0.22
PDLIM1-202ENST00000477757 ANKRD30BLA7E2S9 258 aa16.4■□□□□ 0.22
PDLIM1-202ENST00000477757 TIPRLO75663 272 aa16.4■□□□□ 0.22
PDLIM1-202ENST00000477757 FAHP16930 419 aa16.4■□□□□ 0.22
PDLIM1-202ENST00000477757 GSK3BP49841 420 aa16.4■□□□□ 0.22
PDLIM1-202ENST00000477757 ZNF788Q6ZQV5 615 aa16.4■□□□□ 0.22
PDLIM1-202ENST00000477757 ZBTB46Q86UZ6 589 aa16.4■□□□□ 0.22
PDLIM1-202ENST00000477757 OR2T12Q8NG77 320 aa16.4■□□□□ 0.22
PDLIM1-202ENST00000477757 DUS3LQ96G46 650 aaKnown RBP16.4■□□□□ 0.22
PDLIM1-202ENST00000477757 GAFA1Q96PS6 74 aa16.4■□□□□ 0.22
PDLIM1-202ENST00000477757 NMNAT3Q96T66 252 aa16.4■□□□□ 0.22
PDLIM1-202ENST00000477757 DDOQ99489 341 aa16.4■□□□□ 0.22
PDLIM1-202ENST00000477757 TLNRD1Q9H1K6 362 aa16.4■□□□□ 0.22
PDLIM1-202ENST00000477757 HAO2Q9NYQ3 351 aa16.4■□□□□ 0.22
PDLIM1-202ENST00000477757 KCNG2Q9UJ96 466 aa16.4■□□□□ 0.22
PDLIM1-202ENST00000477757 RAB21Q9UL25 225 aa16.4■□□□□ 0.22
PDLIM1-202ENST00000477757 RENP00797 406 aa16.39■□□□□ 0.21
PDLIM1-202ENST00000477757 TROVE2P10155 538 aaKnown RBP eCLIP16.39■□□□□ 0.21
PDLIM1-202ENST00000477757 DDOSTP39656 456 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms