RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 TGFBR2P37173 567 aa9.77□□□□□ -0.85
HDAC6-219ENST00000476625 RPS6KA3P51812 740 aa9.77□□□□□ -0.85
HDAC6-219ENST00000476625 SMARCD3Q6STE5 483 aa9.77□□□□□ -0.85
HDAC6-219ENST00000476625 WDR82Q6UXN9 313 aa9.77□□□□□ -0.85
HDAC6-219ENST00000476625 RRM2BQ7LG56 351 aa9.77□□□□□ -0.85
HDAC6-219ENST00000476625 CYB561A3Q8NBI2 242 aa9.77□□□□□ -0.85
HDAC6-219ENST00000476625 OR2AJ1Q8NGZ0 328 aa9.77□□□□□ -0.85
HDAC6-219ENST00000476625 LRTOMTQ8WZ04 291 aa9.77□□□□□ -0.85
HDAC6-219ENST00000476625 FGF23Q9GZV9 251 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-219ENST00000476625 NSRP1Q9H0G5 558 aaKnown RBP9.77□□□□□ -0.85
HDAC6-219ENST00000476625 WDR13Q9H1Z4 485 aa9.77□□□□□ -0.85
HDAC6-219ENST00000476625 MMP28Q9H239 520 aa9.77□□□□□ -0.85
HDAC6-219ENST00000476625 OR52D1Q9H346 318 aa9.77□□□□□ -0.85
HDAC6-219ENST00000476625 PRPF19Q9UMS4 504 aaKnown RBP9.77□□□□□ -0.85
HDAC6-219ENST00000476625 TMEM5Q9Y2B1 443 aa9.77□□□□□ -0.85
HDAC6-219ENST00000476625 CAPN7Q9Y6W3 813 aa9.77□□□□□ -0.85
HDAC6-219ENST00000476625 BTBD17A6NE02 478 aa9.76□□□□□ -0.85
HDAC6-219ENST00000476625 BHLHE40O14503 412 aa9.76□□□□□ -0.85
HDAC6-219ENST00000476625 GMDSO60547 372 aa9.76□□□□□ -0.85
HDAC6-219ENST00000476625 CRABP1P29762 137 aa9.76□□□□□ -0.85
HDAC6-219ENST00000476625 GSK3BP49841 420 aa9.76□□□□□ -0.85
HDAC6-219ENST00000476625 SLC7A2P52569 658 aa9.76□□□□□ -0.85
HDAC6-219ENST00000476625 TPTEP56180 551 aa9.76□□□□□ -0.85
HDAC6-219ENST00000476625 ERVFRD-1P60508 538 aa9.76□□□□□ -0.85
HDAC6-219ENST00000476625 KCNJ8Q15842 424 aa9.76□□□□□ -0.85
HDAC6-219ENST00000476625 COQ5Q5HYK3 327 aa9.76□□□□□ -0.85
HDAC6-219ENST00000476625 DNM1P34Q6PK57 102 aa9.76□□□□□ -0.85
HDAC6-219ENST00000476625 Q6ZTK2 550 aa9.76□□□□□ -0.85
HDAC6-219ENST00000476625 CFHR4Q92496 578 aa9.76□□□□□ -0.85
HDAC6-219ENST00000476625 PHF21AQ96BD5 680 aa9.76□□□□□ -0.85
HDAC6-219ENST00000476625 SSX3Q99909 188 aa9.76□□□□□ -0.85
HDAC6-219ENST00000476625 FUZQ9BT04 418 aa9.76□□□□□ -0.85
HDAC6-219ENST00000476625 DCTN5Q9BTE1 182 aa9.76□□□□□ -0.85
HDAC6-219ENST00000476625 IFT27Q9BW83 186 aa9.76□□□□□ -0.85
HDAC6-219ENST00000476625 NDUFAF4Q9P032 175 aa9.76□□□□□ -0.85
HDAC6-219ENST00000476625 FBLN5Q9UBX5 448 aa9.76□□□□□ -0.85
HDAC6-219ENST00000476625 NBEAL2Q6ZNJ1 2754 aa9.76□□□□□ -0.85
HDAC6-219ENST00000476625 BBIP1A8MTZ0 92 aa9.75□□□□□ -0.85
HDAC6-219ENST00000476625 GSTA4O15217 222 aa9.75□□□□□ -0.85
HDAC6-219ENST00000476625 ECDO95905 644 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-219ENST00000476625 PAHP00439 452 aa9.75□□□□□ -0.85
HDAC6-219ENST00000476625 RENP00797 406 aa9.75□□□□□ -0.85
HDAC6-219ENST00000476625 LOXL3P58215 753 aa9.75□□□□□ -0.85
HDAC6-219ENST00000476625 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.75□□□□□ -0.85
HDAC6-219ENST00000476625 DGUOKQ16854 277 aa9.75□□□□□ -0.85
HDAC6-219ENST00000476625 KLHL12Q53G59 568 aa9.75□□□□□ -0.85
HDAC6-219ENST00000476625 PLA1AQ53H76 456 aa9.75□□□□□ -0.85
HDAC6-219ENST00000476625 METTL21CQ5VZV1 264 aa9.75□□□□□ -0.85
HDAC6-219ENST00000476625 CCBE1Q6UXH8 406 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-219ENST00000476625 DPY19L4Q7Z388 723 aa9.75□□□□□ -0.85
HDAC6-219ENST00000476625 DCXRQ7Z4W1 244 aa9.75□□□□□ -0.85
HDAC6-219ENST00000476625 ZBTB46Q86UZ6 589 aa9.75□□□□□ -0.85
HDAC6-219ENST00000476625 OR1M1Q8NGA1 313 aa9.75□□□□□ -0.85
HDAC6-219ENST00000476625 OR9Q1Q8NGQ5 310 aa9.75□□□□□ -0.85
HDAC6-219ENST00000476625 SGCDQ92629 289 aa9.75□□□□□ -0.85
HDAC6-219ENST00000476625 FAM162AQ96A26 154 aa9.75□□□□□ -0.85
HDAC6-219ENST00000476625 GAFA1Q96PS6 74 aa9.75□□□□□ -0.85
HDAC6-219ENST00000476625 NDEL1Q9GZM8 345 aa9.75□□□□□ -0.85
HDAC6-219ENST00000476625 EGLN3Q9H6Z9 239 aa9.75□□□□□ -0.85
HDAC6-219ENST00000476625 MRPL15Q9P015 296 aaKnown RBP9.75□□□□□ -0.85
HDAC6-219ENST00000476625 ZNF319Q9P2F9 582 aa9.75□□□□□ -0.85
HDAC6-219ENST00000476625 KAAG1Q9UBP8 84 aa9.75□□□□□ -0.85
HDAC6-219ENST00000476625 ZNF391Q9UJN7 358 aa9.75□□□□□ -0.85
HDAC6-219ENST00000476625 NOTCH3Q9UM47 2321 aa9.74□□□□□ -0.85
HDAC6-219ENST00000476625 A0A1W2PRQ8 180 aa9.74□□□□□ -0.85
HDAC6-219ENST00000476625 ADARB2-AS1A8MUL3 147 aa9.74□□□□□ -0.85
HDAC6-219ENST00000476625 CDIPTO14735 213 aa9.74□□□□□ -0.85
HDAC6-219ENST00000476625 TBX1O43435 398 aa9.74□□□□□ -0.85
HDAC6-219ENST00000476625 NDUFB3O43676 98 aa9.74□□□□□ -0.85
HDAC6-219ENST00000476625 NDUFA2O43678 99 aa9.74□□□□□ -0.85
HDAC6-219ENST00000476625 MPIG6BO95866 241 aa9.74□□□□□ -0.85
HDAC6-219ENST00000476625 GYPBP06028 91 aa9.74□□□□□ -0.85
HDAC6-219ENST00000476625 SPARCP09486 303 aa9.74□□□□□ -0.85
HDAC6-219ENST00000476625 CLUP10909 449 aa9.74□□□□□ -0.85
HDAC6-219ENST00000476625 OTX1P32242 354 aaPredicted RBP9.74□□□□□ -0.85
HDAC6-219ENST00000476625 BMXP51813 675 aa9.74□□□□□ -0.85
HDAC6-219ENST00000476625 FAM3AP98173 230 aa9.74□□□□□ -0.85
HDAC6-219ENST00000476625 ECH1Q13011 328 aa9.74□□□□□ -0.85
HDAC6-219ENST00000476625 DGCR6Q14129 220 aa9.74□□□□□ -0.85
HDAC6-219ENST00000476625 GFOD2Q3B7J2 385 aa9.74□□□□□ -0.85
HDAC6-219ENST00000476625 DMRTC1Q5HYR2 192 aa9.74□□□□□ -0.85
HDAC6-219ENST00000476625 STUMQ69YW2 141 aa9.74□□□□□ -0.85
HDAC6-219ENST00000476625 PGM2L1Q6PCE3 622 aa9.74□□□□□ -0.85
HDAC6-219ENST00000476625 CRIP3Q6Q6R5 217 aa9.74□□□□□ -0.85
HDAC6-219ENST00000476625 METAP1DQ6UB28 335 aaPredicted RBP9.74□□□□□ -0.85
HDAC6-219ENST00000476625 SLC16A9Q7RTY1 509 aa9.74□□□□□ -0.85
HDAC6-219ENST00000476625 OR8S1Q8NH09 359 aa9.74□□□□□ -0.85
HDAC6-219ENST00000476625 RPL3LQ92901 407 aaKnown RBP9.74□□□□□ -0.85
HDAC6-219ENST00000476625 C7orf34Q96L11 122 aa9.74□□□□□ -0.85
HDAC6-219ENST00000476625 NKX3-1Q99801 234 aaPredicted RBP9.74□□□□□ -0.85
HDAC6-219ENST00000476625 COPS4Q9BT78 406 aa9.74□□□□□ -0.85
HDAC6-219ENST00000476625 CENPMQ9NSP4 180 aa9.74□□□□□ -0.85
HDAC6-219ENST00000476625 FGFR1OP2Q9NVK5 253 aa9.74□□□□□ -0.85
HDAC6-219ENST00000476625 GID8Q9NWU2 228 aa9.74□□□□□ -0.85
HDAC6-219ENST00000476625 AKR7A2O43488 359 aa9.73□□□□□ -0.85
HDAC6-219ENST00000476625 ANGPTL7O43827 346 aa9.73□□□□□ -0.85
HDAC6-219ENST00000476625 NPPAP01160 153 aa9.73□□□□□ -0.85
HDAC6-219ENST00000476625 JUNBP17275 347 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-219ENST00000476625 EEF1B2P24534 225 aaKnown RBP9.73□□□□□ -0.85
HDAC6-219ENST00000476625 SLC6A6P31641 620 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms