RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 RDH5Q92781 318 aa25.12■■□□□ 1.61
HOXB3-208ENST00000476342 LYZL4Q96KX0 146 aa25.12■■□□□ 1.61
HOXB3-208ENST00000476342 ZNF649Q9BS31 505 aa25.12■■□□□ 1.61
HOXB3-208ENST00000476342 RASSF4Q9H2L5 321 aa25.12■■□□□ 1.61
HOXB3-208ENST00000476342 IL19Q9UHD0 177 aa25.12■■□□□ 1.61
HOXB3-208ENST00000476342 LOC390937A0A1W2PQ73 354 aa25.12■■□□□ 1.61
HOXB3-208ENST00000476342 ANKRD30BLA7E2S9 258 aa25.12■■□□□ 1.61
HOXB3-208ENST00000476342 OR10AD1Q8NGE0 317 aa25.12■■□□□ 1.61
HOXB3-208ENST00000476342 GPR84Q9NQS5 396 aa25.12■■□□□ 1.61
HOXB3-208ENST00000476342 CHCHD3Q9NX63 227 aaKnown RBP25.12■■□□□ 1.61
HOXB3-208ENST00000476342 PSORS1C1Q9UIG5 152 aa25.12■■□□□ 1.61
HOXB3-208ENST00000476342 A0A1B0GWJ7 208 aa25.11■■□□□ 1.61
HOXB3-208ENST00000476342 NDUFS8O00217 210 aa25.11■■□□□ 1.61
HOXB3-208ENST00000476342 LIMS3P0CW19 117 aa25.11■■□□□ 1.61
HOXB3-208ENST00000476342 LIMS4P0CW20 117 aa25.11■■□□□ 1.61
HOXB3-208ENST00000476342 ATP6V1B1P15313 513 aa25.11■■□□□ 1.61
HOXB3-208ENST00000476342 TNFRSF1AP19438 455 aa25.11■■□□□ 1.61
HOXB3-208ENST00000476342 ST3GAL4Q11206 333 aa25.11■■□□□ 1.61
HOXB3-208ENST00000476342 MRPL28Q13084 256 aaKnown RBP25.11■■□□□ 1.61
HOXB3-208ENST00000476342 ZNF540Q8NDQ6 660 aa25.11■■□□□ 1.61
HOXB3-208ENST00000476342 HAVCR2Q8TDQ0 301 aa25.11■■□□□ 1.61
HOXB3-208ENST00000476342 PPP1R14AQ96A00 147 aa25.11■■□□□ 1.61
HOXB3-208ENST00000476342 Q9H521 79 aa25.11■■□□□ 1.61
HOXB3-208ENST00000476342 SCN3BQ9NY72 215 aa25.11■■□□□ 1.61
HOXB3-208ENST00000476342 SLC1A7O00341 560 aa25.1■■□□□ 1.61
HOXB3-208ENST00000476342 MLNRO43193 412 aa25.1■■□□□ 1.61
HOXB3-208ENST00000476342 MTRF1O75570 445 aaKnown RBP25.1■■□□□ 1.61
HOXB3-208ENST00000476342 IGLV3-1P01715 115 aa25.1■■□□□ 1.61
HOXB3-208ENST00000476342 HTR1AP08908 422 aa25.1■■□□□ 1.61
HOXB3-208ENST00000476342 ACHEP22303 614 aa25.1■■□□□ 1.61
HOXB3-208ENST00000476342 CA6P23280 308 aa25.1■■□□□ 1.61
HOXB3-208ENST00000476342 PSMB10P40306 273 aa25.1■■□□□ 1.61
HOXB3-208ENST00000476342 MAP2K3P46734 347 aa25.1■■□□□ 1.61
HOXB3-208ENST00000476342 TMPRSS11AQ6ZMR5 421 aa25.1■■□□□ 1.61
HOXB3-208ENST00000476342 AHSA2Q719I0 299 aa25.1■■□□□ 1.61
HOXB3-208ENST00000476342 STX19Q8N4C7 294 aa25.1■■□□□ 1.61
HOXB3-208ENST00000476342 PELI1Q96FA3 418 aa25.1■■□□□ 1.61
HOXB3-208ENST00000476342 CNBD2Q96M20 576 aa25.1■■□□□ 1.61
HOXB3-208ENST00000476342 DLL4Q9NR61 685 aa25.1■■□□□ 1.61
HOXB3-208ENST00000476342 SLC22A13Q9Y226 551 aa25.1■■□□□ 1.61
HOXB3-208ENST00000476342 CAB39Q9Y376 341 aaPredicted RBP25.1■■□□□ 1.61
HOXB3-208ENST00000476342 IGHV1-69-2A0A0G2JMI3 117 aa25.09■■□□□ 1.61
HOXB3-208ENST00000476342 GMDSO60547 372 aa25.09■■□□□ 1.61
HOXB3-208ENST00000476342 HLA-DPB1P04440 258 aa25.09■■□□□ 1.61
HOXB3-208ENST00000476342 CRYBB2P43320 205 aa25.09■■□□□ 1.61
HOXB3-208ENST00000476342 SRP9P49458 86 aaKnown RBP25.09■■□□□ 1.61
HOXB3-208ENST00000476342 OR8G1Q15617 311 aa25.09■■□□□ 1.61
HOXB3-208ENST00000476342 WDR38Q5JTN6 314 aa25.09■■□□□ 1.61
HOXB3-208ENST00000476342 KLBQ86Z14 1044 aa25.09■■□□□ 1.61
HOXB3-208ENST00000476342 C10orf105Q8TEF2 133 aa25.09■■□□□ 1.61
HOXB3-208ENST00000476342 FAM71F1Q96KD3 344 aaPredicted RBP25.09■■□□□ 1.61
HOXB3-208ENST00000476342 OR2V2Q96R30 315 aa25.09■■□□□ 1.61
HOXB3-208ENST00000476342 PIMREGQ9BSJ6 248 aa25.09■■□□□ 1.61
HOXB3-208ENST00000476342 ADAT1Q9BUB4 502 aaKnown RBP25.09■■□□□ 1.61
HOXB3-208ENST00000476342 H0YL77 283 aa25.08■■□□□ 1.61
HOXB3-208ENST00000476342 ETV1P50549 477 aa25.08■■□□□ 1.61
HOXB3-208ENST00000476342 TNK1Q13470 666 aa25.08■■□□□ 1.61
HOXB3-208ENST00000476342 FDX2Q6P4F2 183 aa25.08■■□□□ 1.61
HOXB3-208ENST00000476342 KLHL36Q8N4N3 616 aa25.08■■□□□ 1.61
HOXB3-208ENST00000476342 OR2G2Q8NGZ5 317 aa25.08■■□□□ 1.61
HOXB3-208ENST00000476342 SOX7Q9BT81 388 aa25.08■■□□□ 1.61
HOXB3-208ENST00000476342 ISG20L2Q9H9L3 353 aaKnown RBP25.08■■□□□ 1.61
HOXB3-208ENST00000476342 CHODLQ9H9P2 273 aa25.08■■□□□ 1.61
HOXB3-208ENST00000476342 CELSR1Q9NYQ6 3014 aa25.08■■□□□ 1.61
HOXB3-208ENST00000476342 DHRS3O75911 302 aa25.07■■□□□ 1.6
HOXB3-208ENST00000476342 UBCP0CG48 685 aaKnown RBP25.07■■□□□ 1.6
HOXB3-208ENST00000476342 ACKR3P25106 362 aa25.07■■□□□ 1.6
HOXB3-208ENST00000476342 GNALP38405 381 aa25.07■■□□□ 1.6
HOXB3-208ENST00000476342 PRSS35Q8N3Z0 413 aa25.07■■□□□ 1.6
HOXB3-208ENST00000476342 SPERTQ8NA61 448 aa25.07■■□□□ 1.6
HOXB3-208ENST00000476342 SEMA6DQ8NFY4 1073 aa25.07■■□□□ 1.6
HOXB3-208ENST00000476342 ITLN1Q8WWA0 313 aa25.07■■□□□ 1.6
HOXB3-208ENST00000476342 PAPOLGQ9BWT3 736 aaKnown RBP25.07■■□□□ 1.6
HOXB3-208ENST00000476342 FKBP14Q9NWM8 211 aa25.07■■□□□ 1.6
HOXB3-208ENST00000476342 IGHV4-30-2A0A087WSY4 118 aa25.06■■□□□ 1.6
HOXB3-208ENST00000476342 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP25.06■■□□□ 1.6
HOXB3-208ENST00000476342 TRIM64A6NGJ6 449 aa25.06■■□□□ 1.6
HOXB3-208ENST00000476342 TRIM64BA6NI03 449 aa25.06■■□□□ 1.6
HOXB3-208ENST00000476342 LYNX1G3V0Z9 82 aa25.06■■□□□ 1.6
HOXB3-208ENST00000476342 P2RY10O00398 339 aa25.06■■□□□ 1.6
HOXB3-208ENST00000476342 CDC14BO60729 498 aa25.06■■□□□ 1.6
HOXB3-208ENST00000476342 CCDC159P0C7I6 412 aa25.06■■□□□ 1.6
HOXB3-208ENST00000476342 LYNX1P0DP58 116 aa25.06■■□□□ 1.6
HOXB3-208ENST00000476342 SLC25A16P16260 332 aa25.06■■□□□ 1.6
HOXB3-208ENST00000476342 COL8A2P25067 703 aa25.06■■□□□ 1.6
HOXB3-208ENST00000476342 CCR9P51686 369 aa25.06■■□□□ 1.6
HOXB3-208ENST00000476342 GBX2P52951 348 aaPredicted RBP25.06■■□□□ 1.6
HOXB3-208ENST00000476342 ODF4Q2M2E3 257 aa25.06■■□□□ 1.6
HOXB3-208ENST00000476342 HFEQ30201 348 aa25.06■■□□□ 1.6
HOXB3-208ENST00000476342 DOK3Q7L591 496 aa25.06■■□□□ 1.6
HOXB3-208ENST00000476342 RNF166Q96A37 237 aaPredicted RBP25.06■■□□□ 1.6
HOXB3-208ENST00000476342 MEGF10Q96KG7 1140 aa25.06■■□□□ 1.6
HOXB3-208ENST00000476342 TANC2Q9HCD6 1990 aa25.06■■□□□ 1.6
HOXB3-208ENST00000476342 ZNF469Q96JG9 3925 aaPredicted RBP25.06■■□□□ 1.6
HOXB3-208ENST00000476342 A0A1B0GVI7 797 aa25.05■■□□□ 1.6
HOXB3-208ENST00000476342 F5H5P2 479 aa25.05■■□□□ 1.6
HOXB3-208ENST00000476342 MZT1Q08AG7 82 aa25.05■■□□□ 1.6
HOXB3-208ENST00000476342 RIPPLY1Q0D2K3 151 aa25.05■■□□□ 1.6
HOXB3-208ENST00000476342 CELF2-AS1Q8N7Q2 184 aa25.05■■□□□ 1.6
HOXB3-208ENST00000476342 YIPF5Q969M3 257 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms