RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 KLHL12Q53G59 568 aa10.8□□□□□ -0.68
MRPL55-228ENST00000476267 RPL13AP3Q6NVV1 102 aa10.8□□□□□ -0.68
MRPL55-228ENST00000476267 METAP1DQ6UB28 335 aaPredicted RBP10.8□□□□□ -0.68
MRPL55-228ENST00000476267 LNX2Q8N448 690 aa10.8□□□□□ -0.68
MRPL55-228ENST00000476267 PROKR2Q8NFJ6 384 aa10.8□□□□□ -0.68
MRPL55-228ENST00000476267 OR9Q2Q8NGE9 314 aa10.8□□□□□ -0.68
MRPL55-228ENST00000476267 OR4C15Q8NGM1 316 aa10.8□□□□□ -0.68
MRPL55-228ENST00000476267 OR2T4Q8NH00 348 aa10.8□□□□□ -0.68
MRPL55-228ENST00000476267 TBC1D15Q8TC07 691 aa10.8□□□□□ -0.68
MRPL55-228ENST00000476267 SLAMF6Q96DU3 332 aa10.8□□□□□ -0.68
MRPL55-228ENST00000476267 RNF114Q9Y508 228 aa10.8□□□□□ -0.68
MRPL55-228ENST00000476267 KPTNQ9Y664 436 aa10.8□□□□□ -0.68
MRPL55-228ENST00000476267 IGHV3OR15-7A0A075B7D8 119 aa10.79□□□□□ -0.68
MRPL55-228ENST00000476267 ZNF878C9JN71 531 aa10.79□□□□□ -0.68
MRPL55-228ENST00000476267 XRCC2O43543 280 aa10.79□□□□□ -0.68
MRPL55-228ENST00000476267 MUC1P15941 1255 aaPredicted RBP10.79□□□□□ -0.68
MRPL55-228ENST00000476267 AMY2BP19961 511 aa10.79□□□□□ -0.68
MRPL55-228ENST00000476267 MSX2P35548 267 aaPredicted RBP10.79□□□□□ -0.68
MRPL55-228ENST00000476267 MAGEA2P43356 314 aa10.79□□□□□ -0.68
MRPL55-228ENST00000476267 ENTPD1P49961 510 aa10.79□□□□□ -0.68
MRPL55-228ENST00000476267 PRKXP51817 358 aa10.79□□□□□ -0.68
MRPL55-228ENST00000476267 POU4F2Q12837 409 aa10.79□□□□□ -0.68
MRPL55-228ENST00000476267 CRMP1Q14194 572 aa10.79□□□□□ -0.68
MRPL55-228ENST00000476267 TAF9Q16594 264 aa10.79□□□□□ -0.68
MRPL55-228ENST00000476267 LINC01590Q5TEZ4 76 aa10.79□□□□□ -0.68
MRPL55-228ENST00000476267 WDR82Q6UXN9 313 aa10.79□□□□□ -0.68
MRPL55-228ENST00000476267 Q6ZSV7 163 aa10.79□□□□□ -0.68
MRPL55-228ENST00000476267 SLC16A9Q7RTY1 509 aa10.79□□□□□ -0.68
MRPL55-228ENST00000476267 VMO1Q7Z5L0 202 aa10.79□□□□□ -0.68
MRPL55-228ENST00000476267 PGAM4Q8N0Y7 254 aa10.79□□□□□ -0.68
MRPL55-228ENST00000476267 ZSCAN4Q8NAM6 433 aaPredicted RBP10.79□□□□□ -0.68
MRPL55-228ENST00000476267 ZNF511Q8NB15 262 aa10.79□□□□□ -0.68
MRPL55-228ENST00000476267 OR1M1Q8NGA1 313 aa10.79□□□□□ -0.68
MRPL55-228ENST00000476267 OR9Q1Q8NGQ5 310 aa10.79□□□□□ -0.68
MRPL55-228ENST00000476267 DMRTB1Q96MA1 342 aa10.79□□□□□ -0.68
MRPL55-228ENST00000476267 NSMCE2Q96MF7 247 aa10.79□□□□□ -0.68
MRPL55-228ENST00000476267 RBM4BQ9BQ04 359 aaKnown RBP10.79□□□□□ -0.68
MRPL55-228ENST00000476267 COPS4Q9BT78 406 aa10.79□□□□□ -0.68
MRPL55-228ENST00000476267 TLNRD1Q9H1K6 362 aa10.79□□□□□ -0.68
MRPL55-228ENST00000476267 PPP1R3EQ9H7J1 279 aa10.79□□□□□ -0.68
MRPL55-228ENST00000476267 CNTD2Q9H8S5 307 aa10.79□□□□□ -0.68
MRPL55-228ENST00000476267 RNPEPL1Q9HAU8 725 aa10.79□□□□□ -0.68
MRPL55-228ENST00000476267 C14orf119Q9NWQ9 140 aa10.79□□□□□ -0.68
MRPL55-228ENST00000476267 ZNRD1Q9P1U0 126 aa10.79□□□□□ -0.68
MRPL55-228ENST00000476267 A0A0G2JK05 382 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 hCG_38984A0A1B0GV85 526 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 A0A1B0GVI7 797 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 DHRS12A0PJE2 317 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 A6NLC8 198 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 M0QZ24 198 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 ZNF593O00488 134 aaPredicted RBP10.78□□□□□ -0.68
MRPL55-228ENST00000476267 TIMM23O14925 209 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 GMNNO75496 209 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 GASTP01350 101 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 GYPBP06028 91 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 SPARCP09486 303 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 CLUP10909 449 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 SPI1P17947 270 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 DDOSTP39656 456 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 SLC25A1P53007 311 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 CSNK2BP67870 215 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 MZT1Q08AG7 82 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 WDR38Q5JTN6 314 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 RASSF6Q6ZTQ3 369 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 FAM216BQ8N7L0 139 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 Q8N7P7 452 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 OR52L1Q8NGH7 329 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 OR4Q3Q8NH05 313 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 LRRC29Q8WV35 223 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 ST8SIA4Q92187 359 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 MCUR1Q96AQ8 359 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 SGK3Q96BR1 496 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 SEH1LQ96EE3 360 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 CCT8L2Q96SF2 557 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 ELAC2Q9BQ52 826 aaKnown RBP10.78□□□□□ -0.68
MRPL55-228ENST00000476267 C16orf95Q9H693 158 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 ZNF319Q9P2F9 582 aa10.78□□□□□ -0.68
MRPL55-228ENST00000476267 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.77□□□□□ -0.69
MRPL55-228ENST00000476267 hCG_1807616A0A1W2PRN6 198 aa10.77□□□□□ -0.69
MRPL55-228ENST00000476267 ACOT8O14734 319 aa10.77□□□□□ -0.69
MRPL55-228ENST00000476267 KRT36O76013 467 aa10.77□□□□□ -0.69
MRPL55-228ENST00000476267 FMO3P31513 532 aa10.77□□□□□ -0.69
MRPL55-228ENST00000476267 TGM4P49221 684 aa10.77□□□□□ -0.69
MRPL55-228ENST00000476267 CX3CR1P49238 355 aa10.77□□□□□ -0.69
MRPL55-228ENST00000476267 SAMD4BQ5PRF9 694 aaKnown RBP10.77□□□□□ -0.69
MRPL55-228ENST00000476267 ATPAF1Q5TC12 328 aaPredicted RBP10.77□□□□□ -0.69
MRPL55-228ENST00000476267 STUMQ69YW2 141 aa10.77□□□□□ -0.69
MRPL55-228ENST00000476267 PDZD9Q8IXQ8 264 aa10.77□□□□□ -0.69
MRPL55-228ENST00000476267 LINC00471Q8N535 108 aa10.77□□□□□ -0.69
MRPL55-228ENST00000476267 SCCPDHQ8NBX0 429 aa10.77□□□□□ -0.69
MRPL55-228ENST00000476267 C8orf46Q8TAG6 207 aa10.77□□□□□ -0.69
MRPL55-228ENST00000476267 RNF133Q8WVZ7 376 aa10.77□□□□□ -0.69
MRPL55-228ENST00000476267 TNFRSF14Q92956 283 aa10.77□□□□□ -0.69
MRPL55-228ENST00000476267 C12orf43Q96C57 262 aaKnown RBP10.77□□□□□ -0.69
MRPL55-228ENST00000476267 ITPKCQ96DU7 683 aa10.77□□□□□ -0.69
MRPL55-228ENST00000476267 AMELYQ99218 206 aa10.77□□□□□ -0.69
MRPL55-228ENST00000476267 CCL13Q99616 98 aa10.77□□□□□ -0.69
MRPL55-228ENST00000476267 SEMA6AQ9H2E6 1030 aa10.77□□□□□ -0.69
MRPL55-228ENST00000476267 CENPMQ9NSP4 180 aa10.77□□□□□ -0.69
MRPL55-228ENST00000476267 PRPF19Q9UMS4 504 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms