RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 AKAP13Q12802 2813 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 CNOT1A5YKK6 2376 aaKnown RBP4.5□□□□□ -1.69
SSR3-206ENST00000476217 MPDZO75970 2070 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 PCNX3Q9H6A9 2034 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 A0A0J9YW62 118 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 CCDC160A6NGH7 325 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 TRIM64A6NGJ6 449 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 H0YC42 278 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 MYL12BO14950 172 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 MRPS14O60783 128 aaKnown RBP4.5□□□□□ -1.69
SSR3-206ENST00000476217 VAMP5O95183 116 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 OR2C1O95371 312 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 TXNDC12O95881 172 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 CDK1P06493 297 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 MRPL3P09001 348 aaKnown RBP4.5□□□□□ -1.69
SSR3-206ENST00000476217 ZNF708P17019 499 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 ZNF43P17038 809 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 SPI1P17947 270 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 KLK2P20151 261 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 PSMB9P28065 219 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 PSMB10P40306 273 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 MAP2K4P45985 399 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 RPL5P46777 297 aaKnown RBP4.5□□□□□ -1.69
SSR3-206ENST00000476217 CAMPP49913 170 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 LHX2P50458 406 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 SUCLG1P53597 346 aaKnown RBP4.5□□□□□ -1.69
SSR3-206ENST00000476217 BIDP55957 195 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 CLDN15P56746 228 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 RPL24P83731 157 aaKnown RBP4.5□□□□□ -1.69
SSR3-206ENST00000476217 RAB40BQ12829 278 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 PON3Q15166 354 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 INAQ16352 499 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 C3AR1Q16581 482 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 ZNF239Q16600 458 aaKnown RBP4.5□□□□□ -1.69
SSR3-206ENST00000476217 MS4A18Q3C1V0 323 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 SLC35D3Q5M8T2 416 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 ARMC4Q5T2S8 1044 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 CARD17Q5XLA6 110 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 DNM1P34Q6PK57 102 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 B3GLCTQ6Y288 498 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 C1orf122Q6ZSJ8 110 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 USP43Q70EL4 1123 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 Q75L30 129 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 SLC35D2Q76EJ3 337 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 PRSS48Q7RTY5 328 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 ZNF329Q86UD4 541 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 SYT14Q8NB59 555 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 NPEPL1Q8NDH3 523 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 NOXO1Q8NFA2 376 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 OR51L1Q8NGJ5 315 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 OR51G2Q8NGK0 314 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 OR52I1Q8NGK6 324 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 OR2T4Q8NH00 348 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 OR52I2Q8NH67 350 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 C9orf43Q8TAL5 461 aaPredicted RBP4.5□□□□□ -1.69
SSR3-206ENST00000476217 NEIL3Q8TAT5 605 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 ZNF519Q8TB69 540 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 ZPLD1Q8TCW7 415 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 FCGR1BQ92637 280 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 GGHQ92820 318 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 CPNE4Q96A23 557 aaPredicted RBP4.5□□□□□ -1.69
SSR3-206ENST00000476217 PNPLA2Q96AD5 504 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 LGALS12Q96DT0 336 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 ZMYND19Q96E35 227 aaPredicted RBP4.5□□□□□ -1.69
SSR3-206ENST00000476217 FBXO17Q96EF6 278 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 TMEM80Q96HE8 168 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 OXGR1Q96P68 337 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 CNN2Q99439 309 aaKnown RBP4.5□□□□□ -1.69
SSR3-206ENST00000476217 EMC6Q9BV81 110 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 SRXN1Q9BYN0 137 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 PRRG4Q9BZD6 226 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 SYT4Q9H2B2 425 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 DUSP21Q9H596 190 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 ZDHHC11Q9H8X9 412 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 ACKR4Q9NPB9 350 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 FKBP14Q9NWM8 211 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 MED29Q9NX70 200 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 PAQR5Q9NXK6 330 aaPredicted RBP4.5□□□□□ -1.69
SSR3-206ENST00000476217 TAS2R16Q9NYV7 291 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 MCTS1Q9ULC4 181 aaKnown RBP4.5□□□□□ -1.69
SSR3-206ENST00000476217 ERGIC3Q9Y282 383 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 CMAHPQ9Y471 501 aa4.5□□□□□ -1.69
SSR3-206ENST00000476217 TNRC6AQ8NDV7 1962 aaKnown RBP4.5□□□□□ -1.69
SSR3-206ENST00000476217 PTPRZ1P23471 2315 aaPredicted RBP4.5□□□□□ -1.69
SSR3-206ENST00000476217 KIAA1549Q9HCM3 1950 aa4.49□□□□□ -1.69
SSR3-206ENST00000476217 MED13Q9UHV7 2174 aa4.49□□□□□ -1.69
SSR3-206ENST00000476217 A0A087WV48 116 aa4.49□□□□□ -1.69
SSR3-206ENST00000476217 DAPL1A0PJW8 107 aa4.49□□□□□ -1.69
SSR3-206ENST00000476217 PRSS37A4D1T9 235 aa4.49□□□□□ -1.69
SSR3-206ENST00000476217 TMEM8BA6NDV4 472 aa4.49□□□□□ -1.69
SSR3-206ENST00000476217 CCDC182A6NF36 153 aa4.49□□□□□ -1.69
SSR3-206ENST00000476217 TRIM64CA6NLI5 447 aa4.49□□□□□ -1.69
SSR3-206ENST00000476217 ZNF726A6NNF4 738 aa4.49□□□□□ -1.69
SSR3-206ENST00000476217 C12orf71A8MTZ7 269 aa4.49□□□□□ -1.69
SSR3-206ENST00000476217 K7EM74 188 aa4.49□□□□□ -1.69
SSR3-206ENST00000476217 TRAF3IP2O43734 574 aaPredicted RBP4.49□□□□□ -1.69
SSR3-206ENST00000476217 SLC16A7O60669 478 aa4.49□□□□□ -1.69
SSR3-206ENST00000476217 RAMP1O60894 148 aa4.49□□□□□ -1.69
SSR3-206ENST00000476217 NOL3O60936 208 aaKnown RBP4.49□□□□□ -1.69
SSR3-206ENST00000476217 TRMUO75648 421 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms