RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 ZNF404Q494X3 552 aa17.72■□□□□ 0.43
LIME1-204ENST00000476183 LCN1P1Q5VSP4 162 aa17.72■□□□□ 0.43
LIME1-204ENST00000476183 PHC2Q8IXK0 858 aa17.72■□□□□ 0.43
LIME1-204ENST00000476183 C1orf87Q8N0U7 546 aa17.72■□□□□ 0.43
LIME1-204ENST00000476183 TMEM163Q8TC26 289 aa17.72■□□□□ 0.43
LIME1-204ENST00000476183 PRRG3Q9BZD7 231 aa17.72■□□□□ 0.43
LIME1-204ENST00000476183 POLR3KQ9Y2Y1 108 aaPredicted RBP17.72■□□□□ 0.43
LIME1-204ENST00000476183 PPIAL4AQ9Y536 164 aa17.72■□□□□ 0.43
LIME1-204ENST00000476183 A8MXK9 166 aa17.71■□□□□ 0.43
LIME1-204ENST00000476183 H3BNX3 289 aa17.71■□□□□ 0.43
LIME1-204ENST00000476183 J3QLI3 93 aa17.71■□□□□ 0.43
LIME1-204ENST00000476183 PSMD9O00233 223 aa17.71■□□□□ 0.43
LIME1-204ENST00000476183 ADRA2CP18825 462 aa17.71■□□□□ 0.43
LIME1-204ENST00000476183 KRTAP24-1Q3LI83 254 aa17.71■□□□□ 0.43
LIME1-204ENST00000476183 MEPCEQ7L2J0 689 aaKnown RBP17.71■□□□□ 0.43
LIME1-204ENST00000476183 KRT77Q7Z794 578 aa17.71■□□□□ 0.43
LIME1-204ENST00000476183 KLBQ86Z14 1044 aa17.71■□□□□ 0.43
LIME1-204ENST00000476183 RFLNBQ8N5W9 214 aa17.71■□□□□ 0.43
LIME1-204ENST00000476183 OR8B12Q8NGG6 310 aa17.71■□□□□ 0.43
LIME1-204ENST00000476183 OR11L1Q8NGX0 322 aa17.71■□□□□ 0.43
LIME1-204ENST00000476183 TMEM158Q8WZ71 300 aa17.71■□□□□ 0.43
LIME1-204ENST00000476183 LYZL4Q96KX0 146 aa17.71■□□□□ 0.43
LIME1-204ENST00000476183 IL4I1Q96RQ9 567 aa17.71■□□□□ 0.43
LIME1-204ENST00000476183 PKP2Q99959 881 aa17.71■□□□□ 0.43
LIME1-204ENST00000476183 OSBPL10Q9BXB5 764 aa17.71■□□□□ 0.43
LIME1-204ENST00000476183 FN3KRPQ9HA64 309 aa17.71■□□□□ 0.43
LIME1-204ENST00000476183 METRNQ9UJH8 293 aa17.71■□□□□ 0.43
LIME1-204ENST00000476183 PPIAL4CA0A0B4J2A2 164 aa17.7■□□□□ 0.42
LIME1-204ENST00000476183 ANKRD30BLA7E2S9 258 aa17.7■□□□□ 0.42
LIME1-204ENST00000476183 IRF2P14316 349 aa17.7■□□□□ 0.42
LIME1-204ENST00000476183 RPS2P15880 293 aaKnown RBP17.7■□□□□ 0.42
LIME1-204ENST00000476183 CFL1P23528 166 aaKnown RBP17.7■□□□□ 0.42
LIME1-204ENST00000476183 GATA3P23771 443 aa17.7■□□□□ 0.42
LIME1-204ENST00000476183 ACKR3P25106 362 aa17.7■□□□□ 0.42
LIME1-204ENST00000476183 OR8B8Q15620 311 aa17.7■□□□□ 0.42
LIME1-204ENST00000476183 NXNL2Q5VZ03 156 aa17.7■□□□□ 0.42
LIME1-204ENST00000476183 ZNF826PQ6ZT77 177 aa17.7■□□□□ 0.42
LIME1-204ENST00000476183 WDR86Q86TI4 376 aa17.7■□□□□ 0.42
LIME1-204ENST00000476183 SPERTQ8NA61 448 aa17.7■□□□□ 0.42
LIME1-204ENST00000476183 PLPP7Q8NBV4 271 aa17.7■□□□□ 0.42
LIME1-204ENST00000476183 DEFB108BQ8NET1 73 aa17.7■□□□□ 0.42
LIME1-204ENST00000476183 CNN2Q99439 309 aaKnown RBP17.7■□□□□ 0.42
LIME1-204ENST00000476183 GABARAPL3Q9BY60 117 aa17.7■□□□□ 0.42
LIME1-204ENST00000476183 TTTY10Q9BZA0 68 aa17.7■□□□□ 0.42
LIME1-204ENST00000476183 RGCCQ9H4X1 137 aa17.7■□□□□ 0.42
LIME1-204ENST00000476183 C7orf69Q9H7B7 122 aa17.7■□□□□ 0.42
LIME1-204ENST00000476183 NIPAL2Q9H841 368 aa17.7■□□□□ 0.42
LIME1-204ENST00000476183 RNF7Q9UBF6 113 aa17.7■□□□□ 0.42
LIME1-204ENST00000476183 RHBDD3Q9Y3P4 386 aa17.7■□□□□ 0.42
LIME1-204ENST00000476183 GRPP07492 148 aa17.69■□□□□ 0.42
LIME1-204ENST00000476183 ESCO2Q56NI9 601 aa17.69■□□□□ 0.42
LIME1-204ENST00000476183 LYPD2Q6UXB3 125 aa17.69■□□□□ 0.42
LIME1-204ENST00000476183 C1QL2Q7Z5L3 287 aa17.69■□□□□ 0.42
LIME1-204ENST00000476183 SPATA3Q8NHX4 192 aa17.69■□□□□ 0.42
LIME1-204ENST00000476183 RIBC2Q9H4K1 309 aa17.69■□□□□ 0.42
LIME1-204ENST00000476183 ADGRL4Q9HBW9 690 aa17.69■□□□□ 0.42
LIME1-204ENST00000476183 C1orf123Q9NWV4 160 aa17.69■□□□□ 0.42
LIME1-204ENST00000476183 FAM206AQ9NX38 181 aa17.69■□□□□ 0.42
LIME1-204ENST00000476183 MIOXQ9UGB7 285 aa17.69■□□□□ 0.42
LIME1-204ENST00000476183 ENOPH1Q9UHY7 261 aa17.69■□□□□ 0.42
LIME1-204ENST00000476183 LRCH1Q9Y2L9 728 aa17.69■□□□□ 0.42
LIME1-204ENST00000476183 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.68■□□□□ 0.42
LIME1-204ENST00000476183 SLC22A31A6NKX4 558 aa17.68■□□□□ 0.42
LIME1-204ENST00000476183 ZNF12P17014 697 aa17.68■□□□□ 0.42
LIME1-204ENST00000476183 ROM1Q03395 351 aa17.68■□□□□ 0.42
LIME1-204ENST00000476183 KCTD18Q6PI47 426 aaPredicted RBP17.68■□□□□ 0.42
LIME1-204ENST00000476183 DEGS2Q6QHC5 323 aa17.68■□□□□ 0.42
LIME1-204ENST00000476183 C11orf53Q8IXP5 236 aa17.68■□□□□ 0.42
LIME1-204ENST00000476183 BOLLQ8N9W6 283 aaKnown RBP17.68■□□□□ 0.42
LIME1-204ENST00000476183 OR8S1Q8NH09 359 aa17.68■□□□□ 0.42
LIME1-204ENST00000476183 OR8B4Q96RC9 309 aa17.68■□□□□ 0.42
LIME1-204ENST00000476183 H2AFY2Q9P0M6 372 aaPredicted RBP17.68■□□□□ 0.42
LIME1-204ENST00000476183 A6NLC8 198 aa17.67■□□□□ 0.42
LIME1-204ENST00000476183 TCF21O43680 179 aa17.67■□□□□ 0.42
LIME1-204ENST00000476183 FSHBP01225 129 aa17.67■□□□□ 0.42
LIME1-204ENST00000476183 CPT2P23786 658 aa17.67■□□□□ 0.42
LIME1-204ENST00000476183 CD80P33681 288 aa17.67■□□□□ 0.42
LIME1-204ENST00000476183 PAX2Q02962 417 aa17.67■□□□□ 0.42
LIME1-204ENST00000476183 ZNF154Q13106 437 aa17.67■□□□□ 0.42
LIME1-204ENST00000476183 SFRP4Q6FHJ7 346 aaPredicted RBP17.67■□□□□ 0.42
LIME1-204ENST00000476183 SLC35F2Q8IXU6 374 aa17.67■□□□□ 0.42
LIME1-204ENST00000476183 ZNF679Q8IYX0 411 aa17.67■□□□□ 0.42
LIME1-204ENST00000476183 CSNK2A3Q8NEV1 391 aa17.67■□□□□ 0.42
LIME1-204ENST00000476183 ASB17Q8WXJ9 295 aa17.67■□□□□ 0.42
LIME1-204ENST00000476183 NEIL1Q96FI4 390 aaPredicted RBP17.67■□□□□ 0.42
LIME1-204ENST00000476183 RBM4BQ9BQ04 359 aaKnown RBP17.67■□□□□ 0.42
LIME1-204ENST00000476183 PAPOLGQ9BWT3 736 aaKnown RBP17.67■□□□□ 0.42
LIME1-204ENST00000476183 SSBP3Q9BWW4 388 aaPredicted RBP17.67■□□□□ 0.42
LIME1-204ENST00000476183 MROQ9BYG7 248 aa17.67■□□□□ 0.42
LIME1-204ENST00000476183 OCEL1Q9H607 264 aa17.67■□□□□ 0.42
LIME1-204ENST00000476183 C14orf119Q9NWQ9 140 aa17.67■□□□□ 0.42
LIME1-204ENST00000476183 HAO2Q9NYQ3 351 aa17.67■□□□□ 0.42
LIME1-204ENST00000476183 INSIG2Q9Y5U4 225 aa17.67■□□□□ 0.42
LIME1-204ENST00000476183 TMEM14AQ9Y6G1 99 aa17.67■□□□□ 0.42
LIME1-204ENST00000476183 TMEM269A0A1B0GVZ9 245 aa17.66■□□□□ 0.42
LIME1-204ENST00000476183 C3orf80F5H4A9 247 aa17.66■□□□□ 0.42
LIME1-204ENST00000476183 LGALS8O00214 317 aa17.66■□□□□ 0.42
LIME1-204ENST00000476183 MAGEB4O15481 346 aaPredicted RBP17.66■□□□□ 0.42
LIME1-204ENST00000476183 EGR1P18146 543 aa17.66■□□□□ 0.42
LIME1-204ENST00000476183 EPHA1P21709 976 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms