RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 CCDC134Q9H6E4 229 aa8.93□□□□□ -0.98
CDRT1-205ENST00000475944 GORASP2Q9H8Y8 452 aa8.93□□□□□ -0.98
CDRT1-205ENST00000475944 ONECUT1Q9UBC0 465 aa8.93□□□□□ -0.98
CDRT1-205ENST00000475944 COMMD3-BMI1R4GMX3 469 aa8.93□□□□□ -0.98
CDRT1-205ENST00000475944 V9GYQ6 96 aa8.93□□□□□ -0.98
CDRT1-205ENST00000475944 VWFP04275 2813 aa8.93□□□□□ -0.98
CDRT1-205ENST00000475944 C5orf63A6NC05 138 aa8.92□□□□□ -0.98
CDRT1-205ENST00000475944 TVP23AA6NH52 213 aa8.92□□□□□ -0.98
CDRT1-205ENST00000475944 ZNF878C9JN71 531 aa8.92□□□□□ -0.98
CDRT1-205ENST00000475944 FCN3O75636 299 aa8.92□□□□□ -0.98
CDRT1-205ENST00000475944 TIPRLO75663 272 aa8.92□□□□□ -0.98
CDRT1-205ENST00000475944 TSPAN15O95858 294 aa8.92□□□□□ -0.98
CDRT1-205ENST00000475944 SEMG1P04279 462 aa8.92□□□□□ -0.98
CDRT1-205ENST00000475944 EEF1B2P24534 225 aaKnown RBP8.92□□□□□ -0.98
CDRT1-205ENST00000475944 RRM2P31350 389 aa8.92□□□□□ -0.98
CDRT1-205ENST00000475944 PRKXP51817 358 aa8.92□□□□□ -0.98
CDRT1-205ENST00000475944 POU4F2Q12837 409 aa8.92□□□□□ -0.98
CDRT1-205ENST00000475944 DPY19L4Q7Z388 723 aa8.92□□□□□ -0.98
CDRT1-205ENST00000475944 PIP4P2Q8N4L2 257 aa8.92□□□□□ -0.98
CDRT1-205ENST00000475944 CYB561A3Q8NBI2 242 aa8.92□□□□□ -0.98
CDRT1-205ENST00000475944 LY6G5BQ8NDX9 201 aa8.92□□□□□ -0.98
CDRT1-205ENST00000475944 LRRC29Q8WV35 223 aa8.92□□□□□ -0.98
CDRT1-205ENST00000475944 SPSB4Q96A44 273 aa8.92□□□□□ -0.98
CDRT1-205ENST00000475944 SLAMF6Q96DU3 332 aa8.92□□□□□ -0.98
CDRT1-205ENST00000475944 CENPMQ9NSP4 180 aa8.92□□□□□ -0.98
CDRT1-205ENST00000475944 ADA2Q9NZK5 511 aa8.92□□□□□ -0.98
CDRT1-205ENST00000475944 ZNRD1Q9P1U0 126 aa8.92□□□□□ -0.98
CDRT1-205ENST00000475944 CD300AQ9UGN4 299 aa8.92□□□□□ -0.98
CDRT1-205ENST00000475944 MAGEL2Q9UJ55 1249 aa8.92□□□□□ -0.98
CDRT1-205ENST00000475944 VPREB3Q9UKI3 123 aa8.92□□□□□ -0.98
CDRT1-205ENST00000475944 N6AMT1Q9Y5N5 214 aa8.92□□□□□ -0.98
CDRT1-205ENST00000475944 TBX1O43435 398 aa8.91□□□□□ -0.98
CDRT1-205ENST00000475944 NDUFB3O43676 98 aa8.91□□□□□ -0.98
CDRT1-205ENST00000475944 TSPAN9O75954 239 aa8.91□□□□□ -0.98
CDRT1-205ENST00000475944 FABP3P05413 133 aa8.91□□□□□ -0.98
CDRT1-205ENST00000475944 SPARCP09486 303 aa8.91□□□□□ -0.98
CDRT1-205ENST00000475944 SLC2A1P11166 492 aa8.91□□□□□ -0.98
CDRT1-205ENST00000475944 ANOS1P23352 680 aa8.91□□□□□ -0.98
CDRT1-205ENST00000475944 CFL1P23528 166 aaKnown RBP8.91□□□□□ -0.98
CDRT1-205ENST00000475944 FMO3P31513 532 aa8.91□□□□□ -0.98
CDRT1-205ENST00000475944 TGFBR2P37173 567 aa8.91□□□□□ -0.98
CDRT1-205ENST00000475944 NAA10P41227 235 aaPredicted RBP8.91□□□□□ -0.98
CDRT1-205ENST00000475944 SLC15A1P46059 708 aa8.91□□□□□ -0.98
CDRT1-205ENST00000475944 ENTPD1P49961 510 aa8.91□□□□□ -0.98
CDRT1-205ENST00000475944 GRB2P62993 217 aaKnown RBP8.91□□□□□ -0.98
CDRT1-205ENST00000475944 TIGD6Q17RP2 521 aa8.91□□□□□ -0.98
CDRT1-205ENST00000475944 LRRC10Q5BKY1 277 aa8.91□□□□□ -0.98
CDRT1-205ENST00000475944 WDR38Q5JTN6 314 aa8.91□□□□□ -0.98
CDRT1-205ENST00000475944 PGBD2Q6P3X8 592 aa8.91□□□□□ -0.98
CDRT1-205ENST00000475944 LYPD4Q6UWN0 246 aa8.91□□□□□ -0.98
CDRT1-205ENST00000475944 C1QL4Q86Z23 238 aa8.91□□□□□ -0.98
CDRT1-205ENST00000475944 RNF148Q8N7C7 305 aa8.91□□□□□ -0.98
CDRT1-205ENST00000475944 OR1M1Q8NGA1 313 aa8.91□□□□□ -0.98
CDRT1-205ENST00000475944 FAM110DQ8TAY7 271 aaPredicted RBP8.91□□□□□ -0.98
CDRT1-205ENST00000475944 C12orf43Q96C57 262 aaKnown RBP8.91□□□□□ -0.98
CDRT1-205ENST00000475944 DDOQ99489 341 aa8.91□□□□□ -0.98
CDRT1-205ENST00000475944 CCL13Q99616 98 aa8.91□□□□□ -0.98
CDRT1-205ENST00000475944 EGLN3Q9H6Z9 239 aa8.91□□□□□ -0.98
CDRT1-205ENST00000475944 SP140LQ9H930 580 aa8.91□□□□□ -0.98
CDRT1-205ENST00000475944 SIRT7Q9NRC8 400 aa8.91□□□□□ -0.98
CDRT1-205ENST00000475944 PRPF19Q9UMS4 504 aaKnown RBP8.91□□□□□ -0.98
CDRT1-205ENST00000475944 CDH10Q9Y6N8 788 aa8.91□□□□□ -0.98
CDRT1-205ENST00000475944 ZNF816-ZNF321PA0A0X1KG74 233 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 ANKRD61A6NGH8 418 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 NPFFO15130 113 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 PAHP00439 452 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 APOC1P02654 83 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 ANXA2P07355 339 aaKnown RBP8.9□□□□□ -0.98
CDRT1-205ENST00000475944 CSF1P09603 554 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 PSKH1P11801 424 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 HSD11B1P28845 292 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 PRDX6P30041 224 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 GNALP38405 381 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 CSNK2BP67870 215 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 FAM3AP98173 230 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 SNCBQ16143 134 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 TEX30Q5JUR7 227 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 WDR82Q6UXN9 313 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 SLC16A9Q7RTY1 509 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 WDR86Q86TI4 376 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 C11orf53Q8IXP5 236 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 FGFRL1Q8N441 504 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 GALNT4Q8N4A0 578 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 FTMTQ8N4E7 242 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 SLC37A3Q8NCC5 494 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 OR51L1Q8NGJ5 315 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 OR9Q1Q8NGQ5 310 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 OR5R1Q8NH85 324 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 ZNRF4Q8WWF5 429 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 REEP6Q96HR9 211 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 NSMCE2Q96MF7 247 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 DCTN5Q9BTE1 182 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 PAPOLGQ9BWT3 736 aaKnown RBP8.9□□□□□ -0.98
CDRT1-205ENST00000475944 DNTTIP1Q9H147 329 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 SEMA6AQ9H2E6 1030 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 TOR3AQ9H497 397 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 IL1RAPQ9NPH3 570 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 IL20Q9NYY1 176 aa8.9□□□□□ -0.98
CDRT1-205ENST00000475944 A0A1B0GW55 424 aa8.89□□□□□ -0.99
CDRT1-205ENST00000475944 NKX6-3A6NJ46 265 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms