RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 LRRC29Q8WV35 223 aa10.31□□□□□ -0.76
SKA3-206ENST00000475251 OR4F4Q96R69 305 aa10.31□□□□□ -0.76
SKA3-206ENST00000475251 NMNAT3Q96T66 252 aa10.31□□□□□ -0.76
SKA3-206ENST00000475251 CCL13Q99616 98 aa10.31□□□□□ -0.76
SKA3-206ENST00000475251 NPFFR1Q9GZQ6 430 aa10.31□□□□□ -0.76
SKA3-206ENST00000475251 DNTTIP1Q9H147 329 aa10.31□□□□□ -0.76
SKA3-206ENST00000475251 METTL8Q9H825 291 aaKnown RBP10.31□□□□□ -0.76
SKA3-206ENST00000475251 INTS9Q9NV88 658 aaKnown RBP10.31□□□□□ -0.76
SKA3-206ENST00000475251 FOXJ3Q9UPW0 622 aa10.31□□□□□ -0.76
SKA3-206ENST00000475251 ENPP4Q9Y6X5 453 aa10.31□□□□□ -0.76
SKA3-206ENST00000475251 A0A1W2PRD5 423 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 A0A1W2PRF3 423 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 A0A1W2PRM7 423 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 NKX6-3A6NJ46 265 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 ARPC3O15145 178 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 GSTA4O15217 222 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 XRCC2O43543 280 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 NOS3P29474 1203 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 OMPP47874 163 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 SLC7A2P52569 658 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 PRR20EP86478 221 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 PRR20CP86479 221 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 PRR20DP86480 221 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 PRR20BP86481 221 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 PRR20AP86496 221 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 POU4F2Q12837 409 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 IKZF1Q13422 519 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 AANATQ16613 207 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 OXLD1Q5BKU9 147 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 FGD3Q5JSP0 725 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 GLYATL3Q5SZD4 288 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 DPY19L4Q7Z388 723 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 LNX2Q8N448 690 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 FAM216BQ8N7L0 139 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 C11orf44Q8N8P7 122 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 OR56B2PQ8NGI1 322 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 OR2AE1Q8NHA4 323 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 H1FXQ92522 213 aaKnown RBP10.3□□□□□ -0.76
SKA3-206ENST00000475251 HSH2DQ96JZ2 352 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 ATP6V1G3Q96LB4 118 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 SSX3Q99909 188 aa10.3□□□□□ -0.76
SKA3-206ENST00000475251 NSRP1Q9H0G5 558 aaKnown RBP10.3□□□□□ -0.76
SKA3-206ENST00000475251 RPRD1BQ9NQG5 326 aaKnown RBP10.3□□□□□ -0.76
SKA3-206ENST00000475251 AURKAIP1Q9NWT8 199 aaPredicted RBP10.3□□□□□ -0.76
SKA3-206ENST00000475251 SF3B6Q9Y3B4 125 aaKnown RBP10.3□□□□□ -0.76
SKA3-206ENST00000475251 CXCR6O00574 342 aa10.29□□□□□ -0.76
SKA3-206ENST00000475251 EDF1O60869 148 aaKnown RBP10.29□□□□□ -0.76
SKA3-206ENST00000475251 FBXO24O75426 580 aa10.29□□□□□ -0.76
SKA3-206ENST00000475251 VSIG10L2P0DP72 767 aa10.29□□□□□ -0.76
SKA3-206ENST00000475251 PAICSP22234 425 aaKnown RBP10.29□□□□□ -0.76
SKA3-206ENST00000475251 OTX1P32242 354 aaPredicted RBP10.29□□□□□ -0.76
SKA3-206ENST00000475251 TGM4P49221 684 aa10.29□□□□□ -0.76
SKA3-206ENST00000475251 GSK3BP49841 420 aa10.29□□□□□ -0.76
SKA3-206ENST00000475251 FXYD6P3P58550 94 aa10.29□□□□□ -0.76
SKA3-206ENST00000475251 KLRD1Q13241 179 aa10.29□□□□□ -0.76
SKA3-206ENST00000475251 SNCBQ16143 134 aa10.29□□□□□ -0.76
SKA3-206ENST00000475251 LRRC75BQ2VPJ9 315 aa10.29□□□□□ -0.76
SKA3-206ENST00000475251 ATPAF1Q5TC12 328 aaPredicted RBP10.29□□□□□ -0.76
SKA3-206ENST00000475251 Q8N7P7 452 aa10.29□□□□□ -0.76
SKA3-206ENST00000475251 OR1M1Q8NGA1 313 aa10.29□□□□□ -0.76
SKA3-206ENST00000475251 OR5D13Q8NGL4 314 aa10.29□□□□□ -0.76
SKA3-206ENST00000475251 OR9Q1Q8NGQ5 310 aa10.29□□□□□ -0.76
SKA3-206ENST00000475251 FANK1Q8TC84 345 aa10.29□□□□□ -0.76
SKA3-206ENST00000475251 TNFRSF14Q92956 283 aa10.29□□□□□ -0.76
SKA3-206ENST00000475251 MED30Q96HR3 178 aa10.29□□□□□ -0.76
SKA3-206ENST00000475251 MAP6Q96JE9 813 aa10.29□□□□□ -0.76
SKA3-206ENST00000475251 COPS4Q9BT78 406 aa10.29□□□□□ -0.76
SKA3-206ENST00000475251 TOR3AQ9H497 397 aa10.29□□□□□ -0.76
SKA3-206ENST00000475251 DNAJB11Q9UBS4 358 aa10.29□□□□□ -0.76
SKA3-206ENST00000475251 SIGLEC9Q9Y336 463 aa10.29□□□□□ -0.76
SKA3-206ENST00000475251 A0A1B0GW55 424 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 A0A1W2PQ09 198 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 ACOT8O14734 319 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 IDH3BO43837 385 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 SERPINA1P01009 418 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 DUX4L2P0CJ85 424 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 DUX4L3P0CJ86 424 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 DUX4L4P0CJ87 422 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 DUX4L5P0CJ88 424 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 DUX4L6P0CJ89 424 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 DUX4L7P0CJ90 424 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 HIST1H1CP16403 213 aaKnown RBP10.28□□□□□ -0.76
SKA3-206ENST00000475251 RHCEP18577 417 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 KLF10Q13118 480 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 KRT72Q14CN4 511 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 TAF13Q15543 124 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 LY6EQ16553 131 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 NSUN5P1Q3KNT7 163 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 DUX4L9Q6RFH8 374 aaPredicted RBP10.28□□□□□ -0.76
SKA3-206ENST00000475251 WDR82Q6UXN9 313 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 CPLX4Q7Z7G2 160 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 NDUFA11Q86Y39 141 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 FGFRL1Q8N441 504 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 FTMTQ8N4E7 242 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 CYB561A3Q8NBI2 242 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 OR4K13Q8NH42 304 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 PPP1R35Q8TAP8 253 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 SPSB4Q96A44 273 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 PHF21AQ96BD5 680 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 R3HDM4Q96D70 268 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms