RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 KALRNO60229 2985 aa5.73□□□□□ -1.49
ATG4A-207ENST00000474825 hCG_38984A0A1B0GV85 526 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 SLC17A2O00624 439 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 XRCC2O43543 280 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 LMX1BO60663 402 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 MTRF1O75570 445 aaKnown RBP5.72□□□□□ -1.49
ATG4A-207ENST00000474825 LYZL6O75951 148 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 NCR1O76036 304 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 APOA1P02647 267 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 LCATP04180 440 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 ANXA2P07355 339 aaKnown RBP5.72□□□□□ -1.49
ATG4A-207ENST00000474825 ZNF35P13682 527 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 PRF1P14222 555 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 TUBG1P23258 451 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 WNT5AP41221 380 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 ALDH3B1P43353 468 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 EVX1P49640 407 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 PPP5CP53041 499 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 PPP3R1P63098 170 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 FAM3AP98173 230 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 PLP2Q04941 152 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 PMPCAQ10713 525 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 ZNF846Q147U1 533 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 ODF4Q2M2E3 257 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 SLC25A35Q3KQZ1 300 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 FBXL19-AS1Q494R0 122 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 TIMM23BQ5SRD1 257 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 DDI2Q5TDH0 399 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 MZT2AQ6P582 158 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 CRIP3Q6Q6R5 217 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 BHLHA15Q7RTS1 189 aaPredicted RBP5.72□□□□□ -1.49
ATG4A-207ENST00000474825 SSX8Q7RTT4 187 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 MDP1Q86V88 176 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 CXorf67Q86X51 503 aaPredicted RBP5.72□□□□□ -1.49
ATG4A-207ENST00000474825 LIX1LQ8IVB5 337 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 C1orf174Q8IYL3 243 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 NKAIN3Q8N8D7 197 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 OR5D14Q8NGL3 314 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 OR13C3Q8NGS6 347 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 TSEN15Q8WW01 171 aaKnown RBP5.72□□□□□ -1.49
ATG4A-207ENST00000474825 PP6455Q8WZ26 134 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 APOBEC3DQ96AK3 386 aaPredicted RBP5.72□□□□□ -1.49
ATG4A-207ENST00000474825 FOXRED1Q96CU9 486 aaPredicted RBP5.72□□□□□ -1.49
ATG4A-207ENST00000474825 ORAI1Q96D31 301 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 UQCC2Q9BRT2 126 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 SOX7Q9BT81 388 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 WDR12Q9GZL7 423 aaKnown RBP5.72□□□□□ -1.49
ATG4A-207ENST00000474825 CHST5Q9GZS9 411 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 PPP1R3EQ9H7J1 279 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 PLGRKTQ9HBL7 147 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 HMG20AQ9NP66 347 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 ABCB9Q9NP78 766 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 TMEM138Q9NPI0 162 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 BRD7Q9NPI1 651 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 TUBG2Q9NRH3 451 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 CYSLTR2Q9NS75 346 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 ELOVL5Q9NYP7 299 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 TAS2R4Q9NYW5 299 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 FBLN5Q9UBX5 448 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 TINAGQ9UJW2 476 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 SPATA2Q9UM82 520 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 GTF2A1LQ9UNN4 478 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 AMDHD2Q9Y303 409 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 MEMO1Q9Y316 297 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 AK6Q9Y3D8 172 aaKnown RBP5.72□□□□□ -1.49
ATG4A-207ENST00000474825 V9GYH0 126 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 SPTA1P02549 2419 aa5.72□□□□□ -1.49
ATG4A-207ENST00000474825 IGKV1-9A0A0C4DH69 117 aa5.71□□□□□ -1.5
ATG4A-207ENST00000474825 CIB4A0PJX0 185 aa5.71□□□□□ -1.5
ATG4A-207ENST00000474825 C5orf49A4QMS7 147 aa5.71□□□□□ -1.5
ATG4A-207ENST00000474825 LDLRAD4O15165 306 aa5.71□□□□□ -1.5
ATG4A-207ENST00000474825 SULT1B1O43704 296 aa5.71□□□□□ -1.5
ATG4A-207ENST00000474825 RAD51DO75771 328 aa5.71□□□□□ -1.5
ATG4A-207ENST00000474825 ERCC1P07992 297 aaPredicted RBP5.71□□□□□ -1.5
ATG4A-207ENST00000474825 SLC2A2P11168 524 aaPredicted RBP5.71□□□□□ -1.5
ATG4A-207ENST00000474825 CD79AP11912 226 aa5.71□□□□□ -1.5
ATG4A-207ENST00000474825 ACKR3P25106 362 aa5.71□□□□□ -1.5
ATG4A-207ENST00000474825 BDKRB2P30411 391 aa5.71□□□□□ -1.5
ATG4A-207ENST00000474825 S100A5P33763 92 aa5.71□□□□□ -1.5
ATG4A-207ENST00000474825 APLNRP35414 380 aa5.71□□□□□ -1.5
ATG4A-207ENST00000474825 MNDAP41218 407 aa5.71□□□□□ -1.5
ATG4A-207ENST00000474825 RANBP1P43487 201 aa5.71□□□□□ -1.5
ATG4A-207ENST00000474825 SLC6A9P48067 706 aa5.71□□□□□ -1.5
ATG4A-207ENST00000474825 UBE2NP61088 152 aaKnown RBP5.71□□□□□ -1.5
ATG4A-207ENST00000474825 ZNF92Q03936 586 aa5.71□□□□□ -1.5
ATG4A-207ENST00000474825 RIPPLY1Q0D2K3 151 aa5.71□□□□□ -1.5
ATG4A-207ENST00000474825 DCTN2Q13561 401 aaKnown RBP5.71□□□□□ -1.5
ATG4A-207ENST00000474825 NKAPLQ5M9Q1 402 aa5.71□□□□□ -1.5
ATG4A-207ENST00000474825 GLYATL3Q5SZD4 288 aa5.71□□□□□ -1.5
ATG4A-207ENST00000474825 GLT8D1Q68CQ7 371 aa5.71□□□□□ -1.5
ATG4A-207ENST00000474825 SEZ6L2Q6UXD5 910 aa5.71□□□□□ -1.5
ATG4A-207ENST00000474825 FBXW12Q6X9E4 464 aa5.71□□□□□ -1.5
ATG4A-207ENST00000474825 MYPOPQ86VE0 399 aaPredicted RBP5.71□□□□□ -1.5
ATG4A-207ENST00000474825 LAX1Q8IWV1 398 aa5.71□□□□□ -1.5
ATG4A-207ENST00000474825 PAQR4Q8N4S7 273 aaPredicted RBP5.71□□□□□ -1.5
ATG4A-207ENST00000474825 RELL2Q8NC24 303 aaPredicted RBP5.71□□□□□ -1.5
ATG4A-207ENST00000474825 SLC30A7Q8NEW0 376 aa5.71□□□□□ -1.5
ATG4A-207ENST00000474825 STEAP2Q8NFT2 490 aa5.71□□□□□ -1.5
ATG4A-207ENST00000474825 SEMA6DQ8NFY4 1073 aa5.71□□□□□ -1.5
ATG4A-207ENST00000474825 OR1M1Q8NGA1 313 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms