RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 F5H5K5 113 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 SMLR1H3BR10 107 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 CREBL2O60519 120 aaPredicted RBP8.58□□□□□ -1.04
USP39-214ENST00000474572 CDC14BO60729 498 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 RAB3DO95716 219 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 F10P00742 488 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 CELA3AP09093 270 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 DBHP09172 617 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 GSTP1P09211 210 aaKnown RBP8.58□□□□□ -1.04
USP39-214ENST00000474572 ZNF32P17041 273 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 NAT1P18440 290 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 SDHBP21912 280 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 MAGEA5P43359 124 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 OR3A4PP47883 348 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 PCBD1P61457 104 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 DHODHQ02127 395 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 HGFACQ04756 655 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 SNAI3Q3KNW1 292 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 GLIPR1L1Q6UWM5 242 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 COMMD2Q86X83 199 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 ZNF100Q8IYN0 542 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 FAM89BQ8N5H3 189 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 ACBD4Q8NC06 268 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 OR10R2Q8NGX6 335 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 OR1F12Q8NHA8 337 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 KCNG3Q8TAE7 436 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 ABHD3Q8WU67 409 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 ITFG2Q969R8 447 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 GPR137Q96N19 417 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 SLC25A21Q9BQT8 299 aaPredicted RBP8.58□□□□□ -1.04
USP39-214ENST00000474572 SEC22CQ9BRL7 303 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 GINS4Q9BRT9 223 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 TM2D1Q9BX74 207 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 WNT5BQ9H1J7 359 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 BCO1Q9HAY6 547 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 ZNF222Q9UK12 451 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 ING4Q9UNL4 249 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 VCANP13611 3396 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 OR14I1A6ND48 311 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 MFNGO00587 321 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 SSNA1O43805 119 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 SSX5O60225 188 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 ZNF780AO75290 641 aaPredicted RBP8.57□□□□□ -1.04
USP39-214ENST00000474572 OR2A4O95047 310 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 ACTL6AO96019 429 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 HCKP08631 526 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 GIPP09681 153 aaPredicted RBP8.57□□□□□ -1.04
USP39-214ENST00000474572 ANXA7P20073 488 aaKnown RBP8.57□□□□□ -1.04
USP39-214ENST00000474572 TBPP20226 339 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 MEOX1P50221 254 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 PSG4Q00888 419 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 MEF2DQ14814 521 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 UBE2V2Q15819 145 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 PNLIPRP3Q17RR3 467 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 CDNFQ49AH0 187 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 TSPO2Q5TGU0 170 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 TMEM42Q69YG0 159 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 LINC00696Q6ZRV3 163 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 NLRC3Q7RTR2 1065 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 FJX1Q86VR8 437 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 MEIOBQ8N635 442 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 IL22RA1Q8N6P7 574 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 TMEM104Q8NE00 496 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 OR11H4Q8NGC9 324 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 OR51S1Q8NGJ8 323 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 OR13C8Q8NGS7 320 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 HAS2Q92819 552 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 SGK3Q96BR1 496 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 ZNF775Q96BV0 537 aaPredicted RBP8.57□□□□□ -1.04
USP39-214ENST00000474572 OR2A7Q96R45 310 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 NICN1Q9BSH3 213 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 ZNF436Q9C0F3 470 aaPredicted RBP8.57□□□□□ -1.04
USP39-214ENST00000474572 OR2H1Q9GZK4 316 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 SLC6A15Q9H2J7 730 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 EXO5Q9H790 373 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 ASCL3Q9NQ33 180 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 PLA2G3Q9NZ20 509 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 PIPOXQ9P0Z9 390 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 MYEF2Q9P2K5 600 aaKnown RBP8.57□□□□□ -1.04
USP39-214ENST00000474572 UPB1Q9UBR1 384 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 ELF5Q9UKW6 265 aaPredicted RBP8.57□□□□□ -1.04
USP39-214ENST00000474572 NOSIPQ9Y314 301 aaKnown RBP8.57□□□□□ -1.04
USP39-214ENST00000474572 TIMM10BQ9Y5J6 103 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 COL6A3P12111 3177 aa8.57□□□□□ -1.04
USP39-214ENST00000474572 PTPRBP23467 1997 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 hCG_38984A0A1B0GV85 526 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 ZNF736B4DX44 427 aaPredicted RBP8.56□□□□□ -1.04
USP39-214ENST00000474572 KLRC4-KLRK1H3BQV0 150 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 CA11O75493 328 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 SYNGR4O95473 234 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 CYB5AP00167 134 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 FTH1P19P0C7X4 201 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 COX5BP10606 129 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 B4GALT1P15291 398 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 HIST1H1DP16402 221 aaKnown RBP8.56□□□□□ -1.04
USP39-214ENST00000474572 FAHP16930 419 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 SLC6A9P48067 706 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 RRADP55042 308 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 TMEM50BP56557 158 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 RPS27AP62979 156 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms