RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 ELMOD2Q8IZ81 293 aa10.54□□□□□ -0.72
DDX56-209ENST00000473924 ZNF540Q8NDQ6 660 aa10.54□□□□□ -0.72
DDX56-209ENST00000473924 CSNK2A3Q8NEV1 391 aa10.54□□□□□ -0.72
DDX56-209ENST00000473924 BPIFB6Q8NFQ5 453 aa10.54□□□□□ -0.72
DDX56-209ENST00000473924 ITLN1Q8WWA0 313 aa10.54□□□□□ -0.72
DDX56-209ENST00000473924 CCL17Q92583 94 aa10.54□□□□□ -0.72
DDX56-209ENST00000473924 RORBQ92753 470 aa10.54□□□□□ -0.72
DDX56-209ENST00000473924 PPP1R14AQ96A00 147 aa10.54□□□□□ -0.72
DDX56-209ENST00000473924 FAM71F1Q96KD3 344 aaPredicted RBP10.54□□□□□ -0.72
DDX56-209ENST00000473924 LYZL4Q96KX0 146 aa10.54□□□□□ -0.72
DDX56-209ENST00000473924 C4orf36Q96KX1 117 aa10.54□□□□□ -0.72
DDX56-209ENST00000473924 OR2V2Q96R30 315 aa10.54□□□□□ -0.72
DDX56-209ENST00000473924 ADAT1Q9BUB4 502 aaKnown RBP10.54□□□□□ -0.72
DDX56-209ENST00000473924 REG4Q9BYZ8 158 aa10.54□□□□□ -0.72
DDX56-209ENST00000473924 CHODLQ9H9P2 273 aa10.54□□□□□ -0.72
DDX56-209ENST00000473924 FGF20Q9NP95 211 aaPredicted RBP10.54□□□□□ -0.72
DDX56-209ENST00000473924 GPR84Q9NQS5 396 aa10.54□□□□□ -0.72
DDX56-209ENST00000473924 DLL4Q9NR61 685 aa10.54□□□□□ -0.72
DDX56-209ENST00000473924 CHCHD3Q9NX63 227 aaKnown RBP10.54□□□□□ -0.72
DDX56-209ENST00000473924 TREM2Q9NZC2 230 aa10.54□□□□□ -0.72
DDX56-209ENST00000473924 MRPL15Q9P015 296 aaKnown RBP10.54□□□□□ -0.72
DDX56-209ENST00000473924 MAP1AP78559 2803 aaPredicted RBP10.53□□□□□ -0.72
DDX56-209ENST00000473924 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.53□□□□□ -0.72
DDX56-209ENST00000473924 EFCAB10A6NFE3 127 aa10.53□□□□□ -0.72
DDX56-209ENST00000473924 F5H5P2 479 aa10.53□□□□□ -0.72
DDX56-209ENST00000473924 MLNRO43193 412 aa10.53□□□□□ -0.72
DDX56-209ENST00000473924 XPNPEP2O43895 674 aa10.53□□□□□ -0.72
DDX56-209ENST00000473924 GMDSO60547 372 aa10.53□□□□□ -0.72
DDX56-209ENST00000473924 TTRP02766 147 aa10.53□□□□□ -0.72
DDX56-209ENST00000473924 HTR1AP08908 422 aa10.53□□□□□ -0.72
DDX56-209ENST00000473924 MAP2K3P46734 347 aa10.53□□□□□ -0.72
DDX56-209ENST00000473924 OR8B8Q15620 311 aa10.53□□□□□ -0.72
DDX56-209ENST00000473924 CATSPERDQ86XM0 798 aa10.53□□□□□ -0.72
DDX56-209ENST00000473924 SYS1Q8N2H4 156 aa10.53□□□□□ -0.72
DDX56-209ENST00000473924 OR8S1Q8NH09 359 aa10.53□□□□□ -0.72
DDX56-209ENST00000473924 FBLIM1Q8WUP2 373 aa10.53□□□□□ -0.72
DDX56-209ENST00000473924 YIPF5Q969M3 257 aa10.53□□□□□ -0.72
DDX56-209ENST00000473924 TMEM80Q96HE8 168 aa10.53□□□□□ -0.72
DDX56-209ENST00000473924 C18orf12Q96KH6 178 aa10.53□□□□□ -0.72
DDX56-209ENST00000473924 PAPOLGQ9BWT3 736 aaKnown RBP10.53□□□□□ -0.72
DDX56-209ENST00000473924 ANKRD60Q9BZ19 345 aa10.53□□□□□ -0.72
DDX56-209ENST00000473924 G6PC2Q9NQR9 355 aa10.53□□□□□ -0.72
DDX56-209ENST00000473924 ZNF275Q9NSD4 429 aaPredicted RBP10.53□□□□□ -0.72
DDX56-209ENST00000473924 PLCXD1Q9NUJ7 323 aa10.53□□□□□ -0.72
DDX56-209ENST00000473924 PPP1R3CQ9UQK1 317 aa10.53□□□□□ -0.72
DDX56-209ENST00000473924 SLC22A13Q9Y226 551 aa10.53□□□□□ -0.72
DDX56-209ENST00000473924 ITPR3Q14573 2671 aa10.53□□□□□ -0.72
DDX56-209ENST00000473924 CHD3Q12873 2000 aaKnown RBP10.52□□□□□ -0.73
DDX56-209ENST00000473924 IGHV3-64DA0A0J9YX35 117 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 A0A1B0GVI7 797 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 P2RY10O00398 339 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 PPIHO43447 177 aaKnown RBP10.52□□□□□ -0.73
DDX56-209ENST00000473924 ATP6V1B1P15313 513 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 MYF6P23409 242 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 GIFP27352 417 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 NR4A2P43354 598 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 GPR6P46095 362 aaPredicted RBP10.52□□□□□ -0.73
DDX56-209ENST00000473924 ETV1P50549 477 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 GBX2P52951 348 aaPredicted RBP10.52□□□□□ -0.73
DDX56-209ENST00000473924 TMEM33P57088 247 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 CSNK2BP67870 215 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 SLC3A1Q07837 685 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 MZT1Q08AG7 82 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 ST3GAL4Q11206 333 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 SPRNQ5BIV9 151 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 WDR38Q5JTN6 314 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 C6orf141Q5SZD1 244 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 TMPRSS11AQ6ZMR5 421 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 AHSA2Q719I0 299 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 KLBQ86Z14 1044 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 EGFL6Q8IUX8 553 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 CIARTQ8N365 385 aaPredicted RBP10.52□□□□□ -0.73
DDX56-209ENST00000473924 STX19Q8N4C7 294 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 SPERTQ8NA61 448 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 SEMA6DQ8NFY4 1073 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 PIGCQ92535 297 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 GGHQ92820 318 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 DVL3Q92997 716 aaPredicted RBP10.52□□□□□ -0.73
DDX56-209ENST00000473924 PELI1Q96FA3 418 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 MEGF10Q96KG7 1140 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 CNBD2Q96M20 576 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 SOX7Q9BT81 388 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 TMUB1Q9BVT8 246 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 JAM3Q9BX67 310 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 BPESC1Q9GZL8 116 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 ISG20L2Q9H9L3 353 aaKnown RBP10.52□□□□□ -0.73
DDX56-209ENST00000473924 SCN3BQ9NY72 215 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 CNOT2Q9NZN8 540 aaKnown RBP10.52□□□□□ -0.73
DDX56-209ENST00000473924 RAB26Q9ULW5 256 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 DIMT1Q9UNQ2 313 aaKnown RBP10.52□□□□□ -0.73
DDX56-209ENST00000473924 EXOSC1Q9Y3B2 195 aaKnown RBP10.52□□□□□ -0.73
DDX56-209ENST00000473924 RHBDD3Q9Y3P4 386 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 CACNG2Q9Y698 323 aa10.52□□□□□ -0.73
DDX56-209ENST00000473924 ZNF816-ZNF321PA0A0X1KG74 233 aa10.51□□□□□ -0.73
DDX56-209ENST00000473924 A0A1B0GWJ7 208 aa10.51□□□□□ -0.73
DDX56-209ENST00000473924 ANXA2P2A6NMY6 339 aa10.51□□□□□ -0.73
DDX56-209ENST00000473924 ZNF850A8MQ14 1090 aa10.51□□□□□ -0.73
DDX56-209ENST00000473924 CLDN25C9JDP6 229 aa10.51□□□□□ -0.73
DDX56-209ENST00000473924 SYT7O43581 403 aa10.51□□□□□ -0.73
DDX56-209ENST00000473924 RP2O75695 350 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms