RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 WDR82Q6UXN9 313 aa10.27□□□□□ -0.77
TRAF4-209ENST00000473421 CBLL1Q75N03 491 aa10.27□□□□□ -0.77
TRAF4-209ENST00000473421 REC114Q7Z4M0 266 aa10.27□□□□□ -0.77
TRAF4-209ENST00000473421 ZBTB46Q86UZ6 589 aa10.27□□□□□ -0.77
TRAF4-209ENST00000473421 SLC15A3Q8IY34 581 aa10.27□□□□□ -0.77
TRAF4-209ENST00000473421 FAM86B1Q8N7N1 296 aa10.27□□□□□ -0.77
TRAF4-209ENST00000473421 PLPP7Q8NBV4 271 aa10.27□□□□□ -0.77
TRAF4-209ENST00000473421 OR52J3Q8NH60 311 aa10.27□□□□□ -0.77
TRAF4-209ENST00000473421 PIFOQ8TCI5 191 aa10.27□□□□□ -0.77
TRAF4-209ENST00000473421 SGCDQ92629 289 aa10.27□□□□□ -0.77
TRAF4-209ENST00000473421 SSX3Q99909 188 aa10.27□□□□□ -0.77
TRAF4-209ENST00000473421 MRPL15Q9P015 296 aaKnown RBP10.27□□□□□ -0.77
TRAF4-209ENST00000473421 NDUFAF4Q9P032 175 aa10.27□□□□□ -0.77
TRAF4-209ENST00000473421 ENPP4Q9Y6X5 453 aa10.27□□□□□ -0.77
TRAF4-209ENST00000473421 BTBD17A6NE02 478 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 CXCR6O00574 342 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 BHLHE40O14503 412 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 SERPINA1P01009 418 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 IFNA8P32881 189 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 RPS6KA3P51812 740 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 PRKXP51817 358 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 TPTEP56180 551 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 ERVFRD-1P60508 538 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 LIPEQ05469 1076 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 ECH1Q13011 328 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 DGUOKQ16854 277 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 FGD3Q5JSP0 725 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 VAX1Q5SQQ9 334 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 FOXB2Q5VYV0 432 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 METTL21CQ5VZV1 264 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 FKBP9P1Q75LS8 142 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 RRM2BQ7LG56 351 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 GALNT4Q8N4A0 578 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 BEND2Q8NDZ0 799 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 SDR9C7Q8NEX9 313 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 OR1M1Q8NGA1 313 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 NPRL2Q8WTW4 380 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 DYDC1Q8WWB3 177 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 LZICQ8WZA0 190 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 H1FXQ92522 213 aaKnown RBP10.26□□□□□ -0.77
TRAF4-209ENST00000473421 RCN3Q96D15 328 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 ATP6V1G3Q96LB4 118 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 FGF23Q9GZV9 251 aaPredicted RBP10.26□□□□□ -0.77
TRAF4-209ENST00000473421 SLC22A4Q9H015 551 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 SAR1AQ9NR31 198 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 SERTAD4Q9NUC0 356 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 NECAP2Q9NVZ3 263 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 TMEM5Q9Y2B1 443 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 CAPN7Q9Y6W3 813 aa10.26□□□□□ -0.77
TRAF4-209ENST00000473421 A0A1W2PRQ8 180 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 K7EIL1 84 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 NME4O00746 187 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 MPIG6BO95866 241 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 PAHP00439 452 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 NPPAP01160 153 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 HLA-DQA2P01906 255 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 H1F0P07305 194 aaKnown RBP10.25□□□□□ -0.77
TRAF4-209ENST00000473421 EEF1B2P24534 225 aaKnown RBP10.25□□□□□ -0.77
TRAF4-209ENST00000473421 UBE2E1P51965 193 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 DGCR6Q14129 220 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 MICBQ29980 383 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 KLHL12Q53G59 568 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 COQ5Q5HYK3 327 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 SLC35F1Q5T1Q4 408 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 STUMQ69YW2 141 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 CGB2Q6NT52 195 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 PGM2L1Q6PCE3 622 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 SMARCD3Q6STE5 483 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 Q6ZS46 218 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 CYB561A3Q8NBI2 242 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 OR51L1Q8NGJ5 315 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 OR2AJ1Q8NGZ0 328 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 OR5R1Q8NH85 324 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 C8orf46Q8TAG6 207 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 PPP1R14AQ96A00 147 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 C7orf34Q96L11 122 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 DDOQ99489 341 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 OR52D1Q9H346 318 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 TRIM36Q9NQ86 728 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 INTS9Q9NV88 658 aaKnown RBP10.25□□□□□ -0.77
TRAF4-209ENST00000473421 ZNF319Q9P2F9 582 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 AURKCQ9UQB9 309 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 MAB21L2Q9Y586 359 aa10.25□□□□□ -0.77
TRAF4-209ENST00000473421 CDIPTO14735 213 aa10.24□□□□□ -0.77
TRAF4-209ENST00000473421 NDUFB3O43676 98 aa10.24□□□□□ -0.77
TRAF4-209ENST00000473421 TROVE2P10155 538 aaKnown RBP eCLIP10.24□□□□□ -0.77
TRAF4-209ENST00000473421 IGLL1P15814 213 aa10.24□□□□□ -0.77
TRAF4-209ENST00000473421 MUC1P15941 1255 aaPredicted RBP10.24□□□□□ -0.77
TRAF4-209ENST00000473421 BMXP51813 675 aa10.24□□□□□ -0.77
TRAF4-209ENST00000473421 FAM3AP98173 230 aa10.24□□□□□ -0.77
TRAF4-209ENST00000473421 GUCA2AQ02747 115 aa10.24□□□□□ -0.77
TRAF4-209ENST00000473421 C11orf91Q3C1V1 193 aa10.24□□□□□ -0.77
TRAF4-209ENST00000473421 DNM1P34Q6PK57 102 aa10.24□□□□□ -0.77
TRAF4-209ENST00000473421 DPY19L4Q7Z388 723 aa10.24□□□□□ -0.77
TRAF4-209ENST00000473421 DYNAPQ8N1N2 210 aa10.24□□□□□ -0.77
TRAF4-209ENST00000473421 LINC00471Q8N535 108 aa10.24□□□□□ -0.77
TRAF4-209ENST00000473421 WIPF2Q8TF74 440 aaPredicted RBP10.24□□□□□ -0.77
TRAF4-209ENST00000473421 DUS3LQ96G46 650 aaKnown RBP10.24□□□□□ -0.77
TRAF4-209ENST00000473421 GAFA1Q96PS6 74 aa10.24□□□□□ -0.77
TRAF4-209ENST00000473421 CITED2Q99967 270 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms