RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 PDLIM4P50479 330 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 ACTA2P62736 377 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 ACTG2P63267 376 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 ZNF85Q03923 595 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 MFGE8Q08431 387 aaPredicted RBP11.11□□□□□ -0.63
TPM3-216ENST00000473036 ST3GAL4Q11206 333 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 MRPL28Q13084 256 aaKnown RBP11.11□□□□□ -0.63
TPM3-216ENST00000473036 CARTPTQ16568 116 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 DEGS2Q6QHC5 323 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 TMPRSS11AQ6ZMR5 421 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 SVOPQ8N4V2 548 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 OR8B12Q8NGG6 310 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 OR5L1Q8NGL2 311 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 GGHQ92820 318 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 LYZL4Q96KX0 146 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 COG8Q96MW5 612 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 TBX5Q99593 518 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 SLC30A2Q9BRI3 323 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 RHNO1Q9BSD3 238 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 BPESC1Q9GZL8 116 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 BRD7Q9NPI1 651 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 FAM206AQ9NX38 181 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 DIMT1Q9UNQ2 313 aaKnown RBP11.11□□□□□ -0.63
TPM3-216ENST00000473036 ERGIC3Q9Y282 383 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 MALRD1Q5VYJ5 2156 aa11.11□□□□□ -0.63
TPM3-216ENST00000473036 A0A087WXM4 84 aa11.1□□□□□ -0.63
TPM3-216ENST00000473036 LOC390937A0A1W2PQ73 354 aa11.1□□□□□ -0.63
TPM3-216ENST00000473036 A0A1W2PQL4 384 aaPredicted RBP11.1□□□□□ -0.63
TPM3-216ENST00000473036 DAPL1A0PJW8 107 aa11.1□□□□□ -0.63
TPM3-216ENST00000473036 ZNF254O75437 659 aa11.1□□□□□ -0.63
TPM3-216ENST00000473036 HLA-DPB1P04440 258 aa11.1□□□□□ -0.63
TPM3-216ENST00000473036 ANXA2P07355 339 aaKnown RBP11.1□□□□□ -0.63
TPM3-216ENST00000473036 CD55P08174 381 aa11.1□□□□□ -0.63
TPM3-216ENST00000473036 HSD11B1P28845 292 aa11.1□□□□□ -0.63
TPM3-216ENST00000473036 DSCR9P59020 149 aa11.1□□□□□ -0.63
TPM3-216ENST00000473036 PSMA6P60900 246 aaKnown RBP11.1□□□□□ -0.63
TPM3-216ENST00000473036 SLC35A2P78381 396 aa11.1□□□□□ -0.63
TPM3-216ENST00000473036 FAM3AP98173 230 aa11.1□□□□□ -0.63
TPM3-216ENST00000473036 SMN1Q16637 294 aaKnown RBP11.1□□□□□ -0.63
TPM3-216ENST00000473036 LAIR2Q6ISS4 152 aa11.1□□□□□ -0.63
TPM3-216ENST00000473036 ZNF322Q6U7Q0 402 aaPredicted RBP11.1□□□□□ -0.63
TPM3-216ENST00000473036 PGAP1Q75T13 922 aa11.1□□□□□ -0.63
TPM3-216ENST00000473036 PRSS48Q7RTY5 328 aa11.1□□□□□ -0.63
TPM3-216ENST00000473036 PHC2Q8IXK0 858 aa11.1□□□□□ -0.63
TPM3-216ENST00000473036 OR8G5Q8NG78 346 aa11.1□□□□□ -0.63
TPM3-216ENST00000473036 OR10AD1Q8NGE0 317 aa11.1□□□□□ -0.63
TPM3-216ENST00000473036 SNX33Q8WV41 574 aa11.1□□□□□ -0.63
TPM3-216ENST00000473036 LGALS12Q96DT0 336 aa11.1□□□□□ -0.63
TPM3-216ENST00000473036 ZNF649Q9BS31 505 aa11.1□□□□□ -0.63
TPM3-216ENST00000473036 CDCA4Q9BXL8 241 aa11.1□□□□□ -0.63
TPM3-216ENST00000473036 ZNF696Q9H7X3 374 aa11.1□□□□□ -0.63
TPM3-216ENST00000473036 NIPAL2Q9H841 368 aa11.1□□□□□ -0.63
TPM3-216ENST00000473036 AMBNQ9NP70 447 aa11.1□□□□□ -0.63
TPM3-216ENST00000473036 ZNF275Q9NSD4 429 aaPredicted RBP11.1□□□□□ -0.63
TPM3-216ENST00000473036 FKBP14Q9NWM8 211 aa11.1□□□□□ -0.63
TPM3-216ENST00000473036 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.09□□□□□ -0.632e-7■■■■□ 20.9
TPM3-216ENST00000473036 hCG_38984A0A1B0GV85 526 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 PLSCR5A0PG75 271 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 CD300LBA8K4G0 201 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 XPNPEP2O43895 674 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 SULT1C4O75897 302 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 IGLV3-1P01715 115 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 IGHA1P01876 353 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 CDK1P06493 297 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 ACKR3P25106 362 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 IL2RGP31785 369 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 CRYBB2P43320 205 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 HOXA4Q00056 320 aaPredicted RBP11.09□□□□□ -0.63
TPM3-216ENST00000473036 MVKQ03426 396 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 EGR3Q06889 387 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 MOGQ16653 247 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 PCGF3Q3KNV8 242 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 FAM209AQ5JX71 171 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 KRT77Q7Z794 578 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.09□□□□□ -0.63
TPM3-216ENST00000473036 ZNF679Q8IYX0 411 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 TSPAN14Q8NG11 270 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 OR2Z1Q8NG97 314 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 ITLN1Q8WWA0 313 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 FCGR1BQ92637 280 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 RDH5Q92781 318 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 DVL3Q92997 716 aaPredicted RBP11.09□□□□□ -0.63
TPM3-216ENST00000473036 ELMOD3Q96FG2 381 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 REEP6Q96HR9 211 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 MROQ9BYG7 248 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 SP140LQ9H930 580 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 G6PC2Q9NQR9 355 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 CYSLTR2Q9NS75 346 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 GPR160Q9UJ42 338 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 ZDHHC8Q9ULC8 765 aa11.09□□□□□ -0.63
TPM3-216ENST00000473036 IGHV3-64DA0A0J9YX35 117 aa11.08□□□□□ -0.64
TPM3-216ENST00000473036 LRP5LA4QPB2 252 aa11.08□□□□□ -0.64
TPM3-216ENST00000473036 F5H5P2 479 aa11.08□□□□□ -0.64
TPM3-216ENST00000473036 NDUFS8O00217 210 aa11.08□□□□□ -0.64
TPM3-216ENST00000473036 TBX1O43435 398 aa11.08□□□□□ -0.64
TPM3-216ENST00000473036 CD5LO43866 347 aa11.08□□□□□ -0.64
TPM3-216ENST00000473036 CSF3P09919 207 aa11.08□□□□□ -0.64
TPM3-216ENST00000473036 SLC25A16P16260 332 aa11.08□□□□□ -0.64
TPM3-216ENST00000473036 ACHEP22303 614 aa11.08□□□□□ -0.64
TPM3-216ENST00000473036 DCTDP32321 178 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms