RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 NPFFO15130 113 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 GMDSO60547 372 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 ECDO95905 644 aaPredicted RBP7.59□□□□□ -1.19
VCL-204ENST00000472585 IFNW1P05000 195 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 VSIG10L2P0DP72 767 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 EEF1B2P24534 225 aaKnown RBP7.59□□□□□ -1.19
VCL-204ENST00000472585 OTX1P32242 354 aaPredicted RBP7.59□□□□□ -1.19
VCL-204ENST00000472585 SAA4P35542 130 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 KIR2DS4P43632 304 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 CSNK2BP67870 215 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 COL10A1Q03692 680 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 KLF10Q13118 480 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 KCNJ8Q15842 424 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 PCK2Q16822 640 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 C11orf91Q3C1V1 193 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 KLHL22Q53GT1 634 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 WDR38Q5JTN6 314 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 PGBD2Q6P3X8 592 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 DPY19L2P2Q6ZN68 376 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 CBLL1Q75N03 491 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 ZBTB46Q86UZ6 589 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 SLC15A3Q8IY34 581 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 OR2T12Q8NG77 320 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 OR5T2Q8NGG2 359 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 OR4C13Q8NGP0 309 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 PIFOQ8TCI5 191 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 NPRL2Q8WTW4 380 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 RSRC1Q96IZ7 334 aaKnown RBP7.59□□□□□ -1.19
VCL-204ENST00000472585 CLPTM1LQ96KA5 538 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 DDOQ99489 341 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 ATF6BQ99941 703 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 SH3GL1Q99961 368 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 ADAT1Q9BUB4 502 aaKnown RBP7.59□□□□□ -1.19
VCL-204ENST00000472585 FN3KQ9H479 309 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 ONECUT1Q9UBC0 465 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 POLR1DQ9Y2S0 133 aa7.59□□□□□ -1.19
VCL-204ENST00000472585 MEIOCA2RUB1 952 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 UNC119BA6NIH7 251 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 C3orf84H3BNL1 204 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 M0R135 149 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 CHST1O43916 411 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 EDF1O60869 148 aaKnown RBP7.58□□□□□ -1.2
VCL-204ENST00000472585 FBXO24O75426 580 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 DIRAS1O95057 198 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 NPPAP01160 153 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 VIMP08670 466 aaKnown RBP7.58□□□□□ -1.2
VCL-204ENST00000472585 SLC2A1P11166 492 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 IGLL1P15814 213 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 HIST1H1CP16403 213 aaKnown RBP7.58□□□□□ -1.2
VCL-204ENST00000472585 CRABP1P29762 137 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 SF3A3Q12874 501 aaKnown RBP eCLIP7.58□□□□□ -1.2
VCL-204ENST00000472585 LY6EQ16553 131 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 RFX4Q33E94 735 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 COQ5Q5HYK3 327 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 ZBTB37Q5TC79 503 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 METTL21CQ5VZV1 264 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 WDR82Q6UXN9 313 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 MRPL21Q7Z2W9 205 aaKnown RBP7.58□□□□□ -1.2
VCL-204ENST00000472585 ADCK1Q86TW2 530 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 DTX3Q8N9I9 347 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 OR56B2PQ8NGI1 322 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 OR4K13Q8NH42 304 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 WIPF2Q8TF74 440 aaPredicted RBP7.58□□□□□ -1.2
VCL-204ENST00000472585 ZNF799Q96GE5 643 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 C7orf34Q96L11 122 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 ATP6V1G3Q96LB4 118 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 ERMAPQ96PL5 475 aaPredicted RBP7.58□□□□□ -1.2
VCL-204ENST00000472585 DCTN5Q9BTE1 182 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 FGF23Q9GZV9 251 aaPredicted RBP7.58□□□□□ -1.2
VCL-204ENST00000472585 WDR13Q9H1Z4 485 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 RPRD1BQ9NQG5 326 aaKnown RBP7.58□□□□□ -1.2
VCL-204ENST00000472585 SAR1AQ9NR31 198 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 NDUFAF4Q9P032 175 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 PRPF19Q9UMS4 504 aaKnown RBP7.58□□□□□ -1.2
VCL-204ENST00000472585 ENPP4Q9Y6X5 453 aa7.58□□□□□ -1.2
VCL-204ENST00000472585 A0A1W2PRQ8 180 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 GGT3PA6NGU5 568 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 E9PQ18 207 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 H3BUX3 64 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 CXCR6O00574 342 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 NME4O00746 187 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 BHLHE40O14503 412 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 ZNF682O95780 498 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 SERPINA1P01009 418 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 CD28P10747 220 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 NCK1P16333 377 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 TPTEP56180 551 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 LIPEQ05469 1076 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 ECH1Q13011 328 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 MALLQ13021 153 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 IKZF1Q13422 519 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 DGCR6Q14129 220 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 HABP2Q14520 560 aaPredicted RBP7.57□□□□□ -1.2
VCL-204ENST00000472585 DGUOKQ16854 277 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 IFI44LQ53G44 452 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 KLHL12Q53G59 568 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 ATPAF1Q5TC12 328 aaPredicted RBP7.57□□□□□ -1.2
VCL-204ENST00000472585 CGB2Q6NT52 195 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 NDUFA11Q86Y39 141 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 LNX2Q8N448 690 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms