RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 SLC36A1Q7Z2H8 476 aa7.52□□□□□ -1.21
CPSF4-211ENST00000471455 VMO1Q7Z5L0 202 aa7.52□□□□□ -1.21
CPSF4-211ENST00000471455 TSEN54Q7Z6J9 526 aaKnown RBP7.52□□□□□ -1.21
CPSF4-211ENST00000471455 LINC00346Q8IVM7 164 aa7.52□□□□□ -1.21
CPSF4-211ENST00000471455 FAM162AQ96A26 154 aa7.52□□□□□ -1.21
CPSF4-211ENST00000471455 ERMAPQ96PL5 475 aaPredicted RBP7.52□□□□□ -1.21
CPSF4-211ENST00000471455 SMURF1Q9HCE7 757 aa7.52□□□□□ -1.21
CPSF4-211ENST00000471455 ZNRD1Q9P1U0 126 aa7.52□□□□□ -1.21
CPSF4-211ENST00000471455 ONECUT1Q9UBC0 465 aa7.52□□□□□ -1.21
CPSF4-211ENST00000471455 RPUSD1Q9UJJ7 312 aaKnown RBP7.52□□□□□ -1.21
CPSF4-211ENST00000471455 B9D1Q9UPM9 204 aa7.52□□□□□ -1.21
CPSF4-211ENST00000471455 CMYA5Q8N3K9 4069 aa7.52□□□□□ -1.21
CPSF4-211ENST00000471455 TET2Q6N021 2002 aaPredicted RBP7.51□□□□□ -1.21
CPSF4-211ENST00000471455 LOC100653049A0A140TA62 436 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 ANKRD30BLA7E2S9 258 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 BHLHE40O14503 412 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 ARPC3O15145 178 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 PIN1P1O15428 100 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 IDH3BO43837 385 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 TIPRLO75663 272 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 KRT34O76011 436 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 GYPAP02724 150 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 RHCEP18577 417 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 FUT4P22083 530 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 GABRA5P31644 462 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 IFNGR2P38484 337 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 DDOSTP39656 456 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 NAA10P41227 235 aaPredicted RBP7.51□□□□□ -1.21
CPSF4-211ENST00000471455 CDKN2AP42771 156 aaKnown RBP7.51□□□□□ -1.21
CPSF4-211ENST00000471455 OMPP47874 163 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 SMIM11AP58511 58 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 LIPEQ05469 1076 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 EGR3Q06889 387 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 HERPUD1Q15011 391 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 SNCBQ16143 134 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 RFX4Q33E94 735 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 LRRC10Q5BKY1 277 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 TEX36Q5VZQ5 186 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 NCR3LG1Q68D85 454 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 FAM90A1Q86YD7 464 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 OR6V1Q8N148 313 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 OR8S1Q8NH09 359 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 C12orf43Q96C57 262 aaKnown RBP7.51□□□□□ -1.21
CPSF4-211ENST00000471455 TSSK2Q96PF2 358 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 KRTAP4-12Q9BQ66 201 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 IFT27Q9BW83 186 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 NSRP1Q9H0G5 558 aaKnown RBP7.51□□□□□ -1.21
CPSF4-211ENST00000471455 FAM234AQ9H0X4 552 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 SP140LQ9H930 580 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 RNPEPL1Q9HAU8 725 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 RAB18Q9NP72 206 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 RPRD1BQ9NQG5 326 aaKnown RBP7.51□□□□□ -1.21
CPSF4-211ENST00000471455 SAR1AQ9NR31 198 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 CYB5R1Q9UHQ9 305 aa7.51□□□□□ -1.21
CPSF4-211ENST00000471455 ZNF816-ZNF321PA0A0X1KG74 233 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 NKX6-3A6NJ46 265 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 RNASEK-C17orf49H0YIS7 233 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 DCTN6O00399 190 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 NPFFO15130 113 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 XRCC2O43543 280 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 NDUFB3O43676 98 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 GMNNO75496 209 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 PF4P02776 101 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 OPN1MWP04001 364 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 GRPP07492 148 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 OPN1MW2P0DN77 364 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 OPN1MW3P0DN78 364 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 SLC7A2P52569 658 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 ZNF92Q03936 586 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 ACSM1Q08AH1 577 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 BLMHQ13867 455 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 TAF13Q15543 124 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 RSPO1Q2MKA7 263 aaPredicted RBP7.5□□□□□ -1.21
CPSF4-211ENST00000471455 PGBD2Q6P3X8 592 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 ZBTB46Q86UZ6 589 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 PDZD9Q8IXQ8 264 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 FTMTQ8N4E7 242 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 GCSAMQ8N6F7 178 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 OR4C13Q8NGP0 309 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 RP9Q8TA86 221 aaKnown RBP7.5□□□□□ -1.21
CPSF4-211ENST00000471455 PPP1R14AQ96A00 147 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 RCN3Q96D15 328 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 NMNAT3Q96T66 252 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 HOPXQ9BPY8 73 aaPredicted RBP7.5□□□□□ -1.21
CPSF4-211ENST00000471455 KCTD14Q9BQ13 255 aaPredicted RBP7.5□□□□□ -1.21
CPSF4-211ENST00000471455 COPS4Q9BT78 406 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 CMTM6Q9NX76 183 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 FBLN5Q9UBX5 448 aa7.5□□□□□ -1.21
CPSF4-211ENST00000471455 PRPF19Q9UMS4 504 aaKnown RBP7.5□□□□□ -1.21
CPSF4-211ENST00000471455 SAMD4AQ9UPU9 718 aaKnown RBP7.5□□□□□ -1.21
CPSF4-211ENST00000471455 MEIOCA2RUB1 952 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 XPNPEP2O43895 674 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 LHBP01229 141 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 APOC1P02654 83 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 HIST1H1CP16403 213 aaKnown RBP7.49□□□□□ -1.21
CPSF4-211ENST00000471455 PAICSP22234 425 aaKnown RBP7.49□□□□□ -1.21
CPSF4-211ENST00000471455 CFL1P23528 166 aaKnown RBP7.49□□□□□ -1.21
CPSF4-211ENST00000471455 GNALP38405 381 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 SLC15A1P46059 708 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 BEAN1Q3B7T3 259 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms