RNA–Protein interactions for RNA: ENST00000471396.1

TRIM59-204, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-204ENST00000471396 TREM2Q9NZC2 230 aa6.47□□□□□ -1.37
TRIM59-204ENST00000471396 MRPL15Q9P015 296 aaKnown RBP6.47□□□□□ -1.37
TRIM59-204ENST00000471396 WARS2Q9UGM6 360 aaKnown RBP6.47□□□□□ -1.37
TRIM59-204ENST00000471396 COPS3Q9UNS2 423 aa6.47□□□□□ -1.37
TRIM59-204ENST00000471396 PPP1R3CQ9UQK1 317 aa6.47□□□□□ -1.37
TRIM59-204ENST00000471396 LRP12Q9Y561 859 aa6.47□□□□□ -1.37
TRIM59-204ENST00000471396 ISPDA4D126 451 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 FAM181BA6NEQ2 426 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 ANKRD30BLA7E2S9 258 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 PRR32B1ATL7 298 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 B4DSR2 109 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 FAM157AC9JC47 383 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 E9PQ18 207 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 ZNF670-ZNF695F2Z2N8 137 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 H0YL77 283 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 LMX1BO60663 402 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 ZNF254O75437 659 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 BAG2O95816 211 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 TGFAP01135 160 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 IGHV2-70P01814 119 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 MSMBP08118 114 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 SBK2P0C263 348 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 CA6P23280 308 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 DCTDP32321 178 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 GATA4P43694 442 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 RIDAP52758 137 aaKnown RBP6.46□□□□□ -1.38
TRIM59-204ENST00000471396 LMO4P61968 165 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 BTG1P62324 171 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 FAM3AP98173 230 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 HNRNPA0Q13151 305 aaKnown RBP6.46□□□□□ -1.38
TRIM59-204ENST00000471396 TMED1Q13445 227 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 OR8B8Q15620 311 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 SNCBQ16143 134 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 ZNF181Q2M3W8 571 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 GFOD2Q3B7J2 385 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 ZNF829Q3KNS6 432 aaPredicted RBP6.46□□□□□ -1.38
TRIM59-204ENST00000471396 ZNF322Q6U7Q0 402 aaPredicted RBP6.46□□□□□ -1.38
TRIM59-204ENST00000471396 ZBTB49Q6ZSB9 765 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 MOGAT3Q86VF5 341 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 KLBQ86Z14 1044 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 ZNF679Q8IYX0 411 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 SPICQ8N5J4 248 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 RFLNBQ8N5W9 214 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 OR8B12Q8NGG6 310 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 OR51G2Q8NGK0 314 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 OR51F2Q8NH61 342 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 TRUB1Q8WWH5 349 aaKnown RBP6.46□□□□□ -1.38
TRIM59-204ENST00000471396 RFKQ969G6 155 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 EME1Q96AY2 570 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 SGK3Q96BR1 496 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 HRASLS5Q96KN8 279 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 SIGLEC11Q96RL6 698 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 MBOAT4Q96T53 435 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 MROQ9BYG7 248 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 TTTY10Q9BZA0 68 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 ZNF665Q9H7R5 613 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 GCM1Q9NP62 436 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 CLN6Q9NWW5 311 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 ZNF319Q9P2F9 582 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 LPAR3Q9UBY5 353 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 ZNF391Q9UJN7 358 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 CDC42EP3Q9UKI2 254 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 IKZF2Q9UKS7 526 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 NPTNQ9Y639 398 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 ARHGAP32A7KAX9 2087 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 DOCK11Q5JSL3 2073 aa6.46□□□□□ -1.38
TRIM59-204ENST00000471396 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.45□□□□□ -1.38
TRIM59-204ENST00000471396 IGHV3-64DA0A0J9YX35 117 aa6.45□□□□□ -1.38
TRIM59-204ENST00000471396 ACOD1A6NK06 481 aa6.45□□□□□ -1.38
TRIM59-204ENST00000471396 LRRC30A6NM36 301 aa6.45□□□□□ -1.38
TRIM59-204ENST00000471396 FAM229AH3BQW9 127 aa6.45□□□□□ -1.38
TRIM59-204ENST00000471396 TMEM178BH3BS89 294 aa6.45□□□□□ -1.38
TRIM59-204ENST00000471396 PSMD9O00233 223 aa6.45□□□□□ -1.38
TRIM59-204ENST00000471396 GMDSO60547 372 aa6.45□□□□□ -1.38
TRIM59-204ENST00000471396 APOL3O95236 402 aa6.45□□□□□ -1.38
TRIM59-204ENST00000471396 PTBP3O95758 552 aaKnown RBP6.45□□□□□ -1.38
TRIM59-204ENST00000471396 IGHV2-5P01817 119 aa6.45□□□□□ -1.38
TRIM59-204ENST00000471396 IRF2P14316 349 aa6.45□□□□□ -1.38
TRIM59-204ENST00000471396 HNF1AP20823 631 aa6.45□□□□□ -1.38
TRIM59-204ENST00000471396 PCMT1P22061 227 aa6.45□□□□□ -1.38
TRIM59-204ENST00000471396 MDH2P40926 338 aaKnown RBP6.45□□□□□ -1.38
TRIM59-204ENST00000471396 DVL1P1P54792 670 aaPredicted RBP6.45□□□□□ -1.38
TRIM59-204ENST00000471396 CXCR4P61073 352 aa6.45□□□□□ -1.38
TRIM59-204ENST00000471396 SNRPGP62308 76 aaKnown RBP6.45□□□□□ -1.38
TRIM59-204ENST00000471396 GABPB1Q06547 395 aaPredicted RBP6.45□□□□□ -1.38
TRIM59-204ENST00000471396 EGR3Q06889 387 aa6.45□□□□□ -1.38
TRIM59-204ENST00000471396 MZT1Q08AG7 82 aa6.45□□□□□ -1.38
TRIM59-204ENST00000471396 MAB21L1Q13394 359 aa6.45□□□□□ -1.38
TRIM59-204ENST00000471396 ZMYND11Q15326 602 aa6.45□□□□□ -1.38
TRIM59-204ENST00000471396 KRTAP21-3Q3LHN1 58 aa6.45□□□□□ -1.38
TRIM59-204ENST00000471396 ZIK1Q3SY52 487 aaPredicted RBP6.45□□□□□ -1.38
TRIM59-204ENST00000471396 CHRFAM7AQ494W8 412 aa6.45□□□□□ -1.38
TRIM59-204ENST00000471396 TMEM155Q4W5P6 130 aa6.45□□□□□ -1.38
TRIM59-204ENST00000471396 PRAMEF6Q5VXH4 476 aa6.45□□□□□ -1.38
TRIM59-204ENST00000471396 GLCCI1Q86VQ1 547 aa6.45□□□□□ -1.38
TRIM59-204ENST00000471396 C1orf87Q8N0U7 546 aa6.45□□□□□ -1.38
TRIM59-204ENST00000471396 FTMTQ8N4E7 242 aa6.45□□□□□ -1.38
TRIM59-204ENST00000471396 SPERTQ8NA61 448 aa6.45□□□□□ -1.38
TRIM59-204ENST00000471396 CSNK2A3Q8NEV1 391 aa6.45□□□□□ -1.38
TRIM59-204ENST00000471396 OR11L1Q8NGX0 322 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms