RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 PITPNAQ00169 270 aa8.14□□□□□ -1.11
VPS52-216ENST00000471309 RIPPLY1Q0D2K3 151 aa8.14□□□□□ -1.11
VPS52-216ENST00000471309 KLRB1Q12918 225 aa8.14□□□□□ -1.11
VPS52-216ENST00000471309 P2RY14Q15391 338 aa8.14□□□□□ -1.11
VPS52-216ENST00000471309 PRR30Q53SZ7 412 aaPredicted RBP8.14□□□□□ -1.11
VPS52-216ENST00000471309 PYDC2Q56P42 97 aa8.14□□□□□ -1.11
VPS52-216ENST00000471309 ZBTB37Q5TC79 503 aa8.14□□□□□ -1.11
VPS52-216ENST00000471309 PYHIN1Q6K0P9 492 aa8.14□□□□□ -1.11
VPS52-216ENST00000471309 BEND4Q6ZU67 534 aa8.14□□□□□ -1.11
VPS52-216ENST00000471309 DOLPP1Q86YN1 238 aa8.14□□□□□ -1.11
VPS52-216ENST00000471309 CMTM4Q8IZR5 234 aa8.14□□□□□ -1.11
VPS52-216ENST00000471309 OR8H2Q8N162 312 aa8.14□□□□□ -1.11
VPS52-216ENST00000471309 RPRMLQ8N4K4 120 aa8.14□□□□□ -1.11
VPS52-216ENST00000471309 JAGN1Q8N5M9 183 aa8.14□□□□□ -1.11
VPS52-216ENST00000471309 ZNF610Q8N9Z0 462 aa8.14□□□□□ -1.11
VPS52-216ENST00000471309 MINDY2Q8NBR6 621 aa8.14□□□□□ -1.11
VPS52-216ENST00000471309 NAXEQ8NCW5 288 aa8.14□□□□□ -1.11
VPS52-216ENST00000471309 OR52N4Q8NGI2 321 aa8.14□□□□□ -1.11
VPS52-216ENST00000471309 SETD6Q8TBK2 473 aa8.14□□□□□ -1.11
VPS52-216ENST00000471309 PTX4Q96A99 478 aa8.14□□□□□ -1.11
VPS52-216ENST00000471309 FAM3DQ96BQ1 224 aa8.14□□□□□ -1.11
VPS52-216ENST00000471309 HAVCR1Q96D42 359 aa8.14□□□□□ -1.11
VPS52-216ENST00000471309 OPN3Q9H1Y3 402 aaPredicted RBP8.14□□□□□ -1.11
VPS52-216ENST00000471309 PRORYQ9H606 182 aa8.14□□□□□ -1.11
VPS52-216ENST00000471309 ASF1BQ9NVP2 202 aa8.14□□□□□ -1.11
VPS52-216ENST00000471309 C14orf119Q9NWQ9 140 aa8.14□□□□□ -1.11
VPS52-216ENST00000471309 RHBDL2Q9NX52 303 aa8.14□□□□□ -1.11
VPS52-216ENST00000471309 CGGBP1Q9UFW8 167 aaPredicted RBP8.14□□□□□ -1.11
VPS52-216ENST00000471309 PIGLQ9Y2B2 252 aa8.14□□□□□ -1.11
VPS52-216ENST00000471309 IGKV1-9A0A0C4DH69 117 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 A0A0G2JMP0 313 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 A0A0X1KG70 313 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 A0A1W2PQ09 198 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 A6NIN4 97 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 LDLRAD4O15165 306 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 CTDSPLO15194 276 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 MAGEB3O15480 346 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 BPNT1O95861 308 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 PTTG1O95997 202 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 CSF3P09919 207 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 CBR1P16152 277 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 ACKR3P25106 362 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 ZNF93P35789 620 aaPredicted RBP8.13□□□□□ -1.11
VPS52-216ENST00000471309 MNDAP41218 407 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 POU3F4P49335 361 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 GSK3AP49840 483 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 FAM3AP98173 230 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 ZNF92Q03936 586 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 RBPJQ06330 500 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 SCN1BQ07699 218 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 MALLQ13021 153 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 OXA1LQ15070 435 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 BAK1Q16611 211 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 TBC1D28Q2M2D7 210 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 C1QTNF12Q5T7M4 302 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 TMEM42Q69YG0 159 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 BHLHA15Q7RTS1 189 aaPredicted RBP8.13□□□□□ -1.11
VPS52-216ENST00000471309 CXorf67Q86X51 503 aaPredicted RBP8.13□□□□□ -1.11
VPS52-216ENST00000471309 Q8N402 240 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 SLC30A7Q8NEW0 376 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 OR4M2Q8NGB6 313 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 OR51D1Q8NGF3 324 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 OR4D6Q8NGJ1 314 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 SYNPRQ8TBG9 265 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 SSC4DQ8WTU2 575 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 SPSB1Q96BD6 273 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 S100A16Q96FQ6 103 aaKnown RBP8.13□□□□□ -1.11
VPS52-216ENST00000471309 TECTBQ96PL2 329 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 MOV10Q9HCE1 1003 aaKnown RBP8.13□□□□□ -1.11
VPS52-216ENST00000471309 FBLN5Q9UBX5 448 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 AMDHD2Q9Y303 409 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 CACNA1CQ13936 2221 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 CELSR3Q9NYQ7 3312 aa8.13□□□□□ -1.11
VPS52-216ENST00000471309 FREM1Q5H8C1 2179 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 ZNF816-ZNF321PA0A0X1KG74 233 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 TMEM272A0A1B0GTI8 110 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 OR5H1A6NKK0 313 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 MSTNO14793 375 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 IGKV3-15P01624 115 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 HCKP08631 526 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 OCMP0CE72 109 aaPredicted RBP8.12□□□□□ -1.11
VPS52-216ENST00000471309 SFTPCP11686 197 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 CCL2P13500 99 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 ARSBP15848 533 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 RAB6AP20340 208 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 CCNOP22674 350 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 OPRM1P35372 400 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 WNT5AP41221 380 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 MMP15P51511 669 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 MRPL49Q13405 166 aaKnown RBP8.12□□□□□ -1.11
VPS52-216ENST00000471309 TNK1Q13470 666 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 MADCAM1Q13477 382 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 GK2Q14410 553 aaPredicted RBP8.12□□□□□ -1.11
VPS52-216ENST00000471309 CNN3Q15417 329 aaKnown RBP8.12□□□□□ -1.11
VPS52-216ENST00000471309 UBE2V2Q15819 145 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 TRIM16LQ309B1 348 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 C2orf76Q3KRA6 126 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 CLVS2Q5SYC1 327 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 HACD4Q5VWC8 232 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 TRIQKQ629K1 86 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms