RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 FADS6Q8N9I5 356 aa3.2□□□□□ -1.9
COL9A1-206ENST00000470652 FAM83FQ8NEG4 500 aaPredicted RBP3.2□□□□□ -1.9
COL9A1-206ENST00000470652 OR4K17Q8NGC6 315 aa3.2□□□□□ -1.9
COL9A1-206ENST00000470652 OR52E4Q8NGH9 312 aa3.2□□□□□ -1.9
COL9A1-206ENST00000470652 OR5M9Q8NGP3 310 aa3.2□□□□□ -1.9
COL9A1-206ENST00000470652 OR13C2Q8NGS9 318 aa3.2□□□□□ -1.9
COL9A1-206ENST00000470652 PHF10Q8WUB8 498 aaKnown RBP3.2□□□□□ -1.9
COL9A1-206ENST00000470652 SNRNP27Q8WVK2 155 aaKnown RBP3.2□□□□□ -1.9
COL9A1-206ENST00000470652 SNRNP40Q96DI7 357 aaKnown RBP3.2□□□□□ -1.9
COL9A1-206ENST00000470652 ASB9Q96DX5 294 aa3.2□□□□□ -1.9
COL9A1-206ENST00000470652 PYURFQ96I23 114 aa3.2□□□□□ -1.9
COL9A1-206ENST00000470652 ARL5BQ96KC2 179 aa3.2□□□□□ -1.9
COL9A1-206ENST00000470652 RNF145Q96MT1 663 aa3.2□□□□□ -1.9
COL9A1-206ENST00000470652 RAB3IPQ96QF0 476 aaPredicted RBP3.2□□□□□ -1.9
COL9A1-206ENST00000470652 MCHR1Q99705 422 aa3.2□□□□□ -1.9
COL9A1-206ENST00000470652 CHID1Q9BWS9 393 aa3.2□□□□□ -1.9
COL9A1-206ENST00000470652 PAPOLGQ9BWT3 736 aaKnown RBP3.2□□□□□ -1.9
COL9A1-206ENST00000470652 PINK1Q9BXM7 581 aa3.2□□□□□ -1.9
COL9A1-206ENST00000470652 ANGPTL4Q9BY76 406 aa3.2□□□□□ -1.9
COL9A1-206ENST00000470652 SRXN1Q9BYN0 137 aa3.2□□□□□ -1.9
COL9A1-206ENST00000470652 UBQLN3Q9H347 655 aa3.2□□□□□ -1.9
COL9A1-206ENST00000470652 TRIM45Q9H8W5 580 aaPredicted RBP3.2□□□□□ -1.9
COL9A1-206ENST00000470652 JPT2Q9H910 190 aa3.2□□□□□ -1.9
COL9A1-206ENST00000470652 UBQLN4Q9NRR5 601 aa3.2□□□□□ -1.9
COL9A1-206ENST00000470652 ASF1BQ9NVP2 202 aa3.2□□□□□ -1.9
COL9A1-206ENST00000470652 ACTR3BQ9P1U1 418 aa3.2□□□□□ -1.9
COL9A1-206ENST00000470652 IL20RAQ9UHF4 553 aa3.2□□□□□ -1.9
COL9A1-206ENST00000470652 DKKL1Q9UK85 242 aa3.2□□□□□ -1.9
COL9A1-206ENST00000470652 CLEC4AQ9UMR7 237 aa3.2□□□□□ -1.9
COL9A1-206ENST00000470652 LIPT1Q9Y234 373 aa3.2□□□□□ -1.9
COL9A1-206ENST00000470652 CFL2Q9Y281 166 aa3.2□□□□□ -1.9
COL9A1-206ENST00000470652 C15orf41Q9Y2V0 281 aa3.2□□□□□ -1.9
COL9A1-206ENST00000470652 RRP15Q9Y3B9 282 aaKnown RBP3.2□□□□□ -1.9
COL9A1-206ENST00000470652 DIDO1Q9BTC0 2240 aaKnown RBP3.19□□□□□ -1.9
COL9A1-206ENST00000470652 SPTA1P02549 2419 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 HIVEP3Q5T1R4 2406 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 TRAV27A0A087WT01 109 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 TMED7-TICAM2A0A0A6YYA0 188 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 A0A0J9YW62 118 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 A0A1B0GTH9 108 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 CFAP73A6NFT4 308 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 SRRM5B3KS81 715 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 SHISA9B4DS77 424 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 NPIPA2E9PIF3 369 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 MKRN2OSH3BPM6 223 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 CDC42EP2O14613 210 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 TNFSF11O14788 317 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 TNFSF12O43508 249 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 CIB2O75838 187 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 ATP5HO75947 161 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 SOX14O95416 240 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 MT-ND2P03891 347 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 IFI6P09912 130 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 ICAM2P13598 275 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 HPGDP15428 266 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 CNR1P21554 472 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 DPP4P27487 766 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 RRM2P31350 389 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 POLR2IP36954 125 aaKnown RBP3.19□□□□□ -1.9
COL9A1-206ENST00000470652 RPS5P46782 204 aaKnown RBP3.19□□□□□ -1.9
COL9A1-206ENST00000470652 ZNF41P51814 821 aaPredicted RBP3.19□□□□□ -1.9
COL9A1-206ENST00000470652 TDGF1P3P51864 188 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 MNAT1P51948 309 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 TAS2R41P59536 307 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 SPIBQ01892 262 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 RBBP4Q09028 425 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 MERTKQ12866 999 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 BIKQ13323 160 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 RCN1Q15293 331 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 GLYR1Q49A26 553 aaPredicted RBP3.19□□□□□ -1.9
COL9A1-206ENST00000470652 LIN52Q52LA3 116 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 IFI44LQ53G44 452 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 RAET1LQ5VY80 246 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 ERICH5Q6P6B1 374 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 PODNL1Q6PEZ8 512 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 ZDHHC21Q8IVQ6 265 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 CLDN22Q8N7P3 220 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 ICA1LQ8NDH6 482 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 OR1J4Q8NGS1 313 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 OR5W2Q8NH69 310 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 ZNF563Q8TA94 476 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 ZPLD1Q8TCW7 415 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 ADAMTS16Q8TE57 1224 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 HAS2Q92819 552 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 SLC41A3Q96GZ6 507 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 C1orf147Q96MC9 270 aaPredicted RBP3.19□□□□□ -1.9
COL9A1-206ENST00000470652 IP6K3Q96PC2 410 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 SLC29A1Q99808 456 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 SH3GL1Q99961 368 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 NIPSNAP1Q9BPW8 284 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 FAM173AQ9BQD7 235 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 ALKBH7Q9BT30 221 aaPredicted RBP3.19□□□□□ -1.9
COL9A1-206ENST00000470652 UGT2B28Q9BY64 529 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 COQ10BQ9H8M1 238 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 GORASP2Q9H8Y8 452 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 S100A14Q9HCY8 104 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 MEPEQ9NQ76 525 aaPredicted RBP3.19□□□□□ -1.9
COL9A1-206ENST00000470652 PNPLA3Q9NST1 481 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 ACER3Q9NUN7 267 aa3.19□□□□□ -1.9
COL9A1-206ENST00000470652 CNIH4Q9P003 139 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms