RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 IFNW1P05000 195 aa15.43■□□□□ 0.06
NCKIPSD-209ENST00000470006 MSX2P35548 267 aaPredicted RBP15.43■□□□□ 0.06
NCKIPSD-209ENST00000470006 GSK3BP49841 420 aa15.43■□□□□ 0.06
NCKIPSD-209ENST00000470006 BMXP51813 675 aa15.43■□□□□ 0.06
NCKIPSD-209ENST00000470006 SNAI3Q3KNW1 292 aa15.43■□□□□ 0.06
NCKIPSD-209ENST00000470006 SLC36A3Q495N2 470 aa15.43■□□□□ 0.06
NCKIPSD-209ENST00000470006 DPY19L4Q7Z388 723 aa15.43■□□□□ 0.06
NCKIPSD-209ENST00000470006 SEH1LQ96EE3 360 aa15.43■□□□□ 0.06
NCKIPSD-209ENST00000470006 ZNF799Q96GE5 643 aa15.43■□□□□ 0.06
NCKIPSD-209ENST00000470006 FAM46AQ96IP4 442 aaKnown RBP15.43■□□□□ 0.06
NCKIPSD-209ENST00000470006 OR5M11Q96RB7 305 aa15.43■□□□□ 0.06
NCKIPSD-209ENST00000470006 SNX13Q9Y5W8 968 aa15.43■□□□□ 0.06
NCKIPSD-209ENST00000470006 WI2-2373I1.2A0A1W2PRP0 233 aa15.42■□□□□ 0.06
NCKIPSD-209ENST00000470006 H0YAE9 185 aa15.42■□□□□ 0.06
NCKIPSD-209ENST00000470006 M0R1W7 72 aa15.42■□□□□ 0.06
NCKIPSD-209ENST00000470006 DCTN6O00399 190 aa15.42■□□□□ 0.06
NCKIPSD-209ENST00000470006 CHST1O43916 411 aa15.42■□□□□ 0.06
NCKIPSD-209ENST00000470006 PPP1R3DO95685 299 aa15.42■□□□□ 0.06
NCKIPSD-209ENST00000470006 PF4V1P10720 104 aa15.42■□□□□ 0.06
NCKIPSD-209ENST00000470006 NDUFB7P17568 137 aa15.42■□□□□ 0.06
NCKIPSD-209ENST00000470006 KDELR2P33947 212 aa15.42■□□□□ 0.06
NCKIPSD-209ENST00000470006 NAA10P41227 235 aaPredicted RBP15.42■□□□□ 0.06
NCKIPSD-209ENST00000470006 RPS6KA3P51812 740 aa15.42■□□□□ 0.06
NCKIPSD-209ENST00000470006 SELENOWP63302 87 aa15.42■□□□□ 0.06
NCKIPSD-209ENST00000470006 RFX4Q33E94 735 aa15.42■□□□□ 0.06
NCKIPSD-209ENST00000470006 GLYATL3Q5SZD4 288 aa15.42■□□□□ 0.06
NCKIPSD-209ENST00000470006 OR56B2PQ8NGI1 322 aa15.42■□□□□ 0.06
NCKIPSD-209ENST00000470006 RNPEPL1Q9HAU8 725 aa15.42■□□□□ 0.06
NCKIPSD-209ENST00000470006 NRIP3Q9NQ35 241 aa15.42■□□□□ 0.06
NCKIPSD-209ENST00000470006 B9D1Q9UPM9 204 aa15.42■□□□□ 0.06
NCKIPSD-209ENST00000470006 TMEM5Q9Y2B1 443 aa15.42■□□□□ 0.06
NCKIPSD-209ENST00000470006 NKX6-3A6NJ46 265 aa15.41■□□□□ 0.06
NCKIPSD-209ENST00000470006 ANKRD30BLA7E2S9 258 aa15.41■□□□□ 0.06
NCKIPSD-209ENST00000470006 TROVE2P10155 538 aaKnown RBP eCLIP15.41■□□□□ 0.06
NCKIPSD-209ENST00000470006 SELLP14151 372 aa15.41■□□□□ 0.06
NCKIPSD-209ENST00000470006 FAHP16930 419 aa15.41■□□□□ 0.06
NCKIPSD-209ENST00000470006 LIAT1Q6ZQX7 453 aa15.41■□□□□ 0.06
NCKIPSD-209ENST00000470006 C8orf46Q8TAG6 207 aa15.41■□□□□ 0.06
NCKIPSD-209ENST00000470006 DUS3LQ96G46 650 aaKnown RBP15.41■□□□□ 0.06
NCKIPSD-209ENST00000470006 TMEM120AQ9BXJ8 343 aa15.41■□□□□ 0.06
NCKIPSD-209ENST00000470006 PARD6BQ9BYG5 372 aa15.41■□□□□ 0.06
NCKIPSD-209ENST00000470006 MEGF9Q9H1U4 602 aa15.41■□□□□ 0.06
NCKIPSD-209ENST00000470006 SNTG1Q9NSN8 517 aa15.41■□□□□ 0.06
NCKIPSD-209ENST00000470006 SERTAD4Q9NUC0 356 aa15.41■□□□□ 0.06
NCKIPSD-209ENST00000470006 ZNF391Q9UJN7 358 aa15.41■□□□□ 0.06
NCKIPSD-209ENST00000470006 ADARB2-AS1A8MUL3 147 aa15.4■□□□□ 0.06
NCKIPSD-209ENST00000470006 FFAR1O14842 300 aa15.4■□□□□ 0.06
NCKIPSD-209ENST00000470006 RENP00797 406 aa15.4■□□□□ 0.06
NCKIPSD-209ENST00000470006 TGM4P49221 684 aa15.4■□□□□ 0.06
NCKIPSD-209ENST00000470006 CSNK2BP67870 215 aa15.4■□□□□ 0.06
NCKIPSD-209ENST00000470006 CRIP3Q6Q6R5 217 aa15.4■□□□□ 0.06
NCKIPSD-209ENST00000470006 DPY19L2P2Q6ZN68 376 aa15.4■□□□□ 0.06
NCKIPSD-209ENST00000470006 VTCN1Q7Z7D3 282 aa15.4■□□□□ 0.06
NCKIPSD-209ENST00000470006 C11orf53Q8IXP5 236 aa15.4■□□□□ 0.06
NCKIPSD-209ENST00000470006 OR6V1Q8N148 313 aa15.4■□□□□ 0.06
NCKIPSD-209ENST00000470006 WFDC9Q8NEX5 89 aa15.4■□□□□ 0.06
NCKIPSD-209ENST00000470006 SLC26A10Q8NG04 563 aa15.4■□□□□ 0.06
NCKIPSD-209ENST00000470006 TSPEARQ8WU66 669 aa15.4■□□□□ 0.06
NCKIPSD-209ENST00000470006 ZNF702PQ9H963 129 aa15.4■□□□□ 0.06
NCKIPSD-209ENST00000470006 SLC25A10Q9UBX3 287 aaPredicted RBP15.4■□□□□ 0.06
NCKIPSD-209ENST00000470006 SIGLEC7Q9Y286 467 aa15.4■□□□□ 0.06
NCKIPSD-209ENST00000470006 TRBV23-1A0A0A0MS06 115 aa15.39■□□□□ 0.05
NCKIPSD-209ENST00000470006 IGLV1-36A0A0B4J1U3 117 aa15.39■□□□□ 0.05
NCKIPSD-209ENST00000470006 PTP4A3O75365 173 aa15.39■□□□□ 0.05
NCKIPSD-209ENST00000470006 PF4P02776 101 aa15.39■□□□□ 0.05
NCKIPSD-209ENST00000470006 SLC35A2P78381 396 aa15.39■□□□□ 0.05
NCKIPSD-209ENST00000470006 AANATQ16613 207 aa15.39■□□□□ 0.05
NCKIPSD-209ENST00000470006 WDR82Q6UXN9 313 aa15.39■□□□□ 0.05
NCKIPSD-209ENST00000470006 OR1M1Q8NGA1 313 aa15.39■□□□□ 0.05
NCKIPSD-209ENST00000470006 OR8J3Q8NGG0 315 aa15.39■□□□□ 0.05
NCKIPSD-209ENST00000470006 OR5D13Q8NGL4 314 aa15.39■□□□□ 0.05
NCKIPSD-209ENST00000470006 C12orf43Q96C57 262 aaKnown RBP15.39■□□□□ 0.05
NCKIPSD-209ENST00000470006 MED30Q96HR3 178 aa15.39■□□□□ 0.05
NCKIPSD-209ENST00000470006 ERMAPQ96PL5 475 aaPredicted RBP15.39■□□□□ 0.05
NCKIPSD-209ENST00000470006 GPX7Q96SL4 187 aaPredicted RBP15.39■□□□□ 0.05
NCKIPSD-209ENST00000470006 DDOQ99489 341 aa15.39■□□□□ 0.05
NCKIPSD-209ENST00000470006 PNRC2Q9NPJ4 139 aaKnown RBP15.39■□□□□ 0.05
NCKIPSD-209ENST00000470006 HAO2Q9NYQ3 351 aa15.39■□□□□ 0.05
NCKIPSD-209ENST00000470006 CYB5R1Q9UHQ9 305 aa15.39■□□□□ 0.05
NCKIPSD-209ENST00000470006 DNAH9Q9NYC9 4486 aa15.38■□□□□ 0.05
NCKIPSD-209ENST00000470006 E9PQ18 207 aa15.38■□□□□ 0.05
NCKIPSD-209ENST00000470006 CDIPTO14735 213 aa15.38■□□□□ 0.05
NCKIPSD-209ENST00000470006 ZNF682O95780 498 aa15.38■□□□□ 0.05
NCKIPSD-209ENST00000470006 TFF1P04155 84 aa15.38■□□□□ 0.05
NCKIPSD-209ENST00000470006 ZNF823P16415 610 aa15.38■□□□□ 0.05
NCKIPSD-209ENST00000470006 PAICSP22234 425 aaKnown RBP15.38■□□□□ 0.05
NCKIPSD-209ENST00000470006 SLC7A2P52569 658 aa15.38■□□□□ 0.05
NCKIPSD-209ENST00000470006 LGALS4P56470 323 aa15.38■□□□□ 0.05
NCKIPSD-209ENST00000470006 KRTAP10-11P60412 298 aa15.38■□□□□ 0.05
NCKIPSD-209ENST00000470006 PLA1AQ53H76 456 aa15.38■□□□□ 0.05
NCKIPSD-209ENST00000470006 CPLX4Q7Z7G2 160 aa15.38■□□□□ 0.05
NCKIPSD-209ENST00000470006 RSRC1Q96IZ7 334 aaKnown RBP15.38■□□□□ 0.05
NCKIPSD-209ENST00000470006 NMNAT3Q96T66 252 aa15.38■□□□□ 0.05
NCKIPSD-209ENST00000470006 RPRD1BQ9NQG5 326 aaKnown RBP15.38■□□□□ 0.05
NCKIPSD-209ENST00000470006 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.37■□□□□ 0.05
NCKIPSD-209ENST00000470006 SLC2A1P11166 492 aa15.37■□□□□ 0.05
NCKIPSD-209ENST00000470006 AMY2BP19961 511 aa15.37■□□□□ 0.05
NCKIPSD-209ENST00000470006 PRKXP51817 358 aa15.37■□□□□ 0.05
NCKIPSD-209ENST00000470006 TAF13Q15543 124 aa15.37■□□□□ 0.05
NCKIPSD-209ENST00000470006 STUMQ69YW2 141 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms