RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 TTRP02766 147 aa10.77□□□□□ -0.69
SPTLC1-204ENST00000469778 TNFRSF1AP19438 455 aa10.77□□□□□ -0.69
SPTLC1-204ENST00000469778 ALDH3B1P43353 468 aa10.77□□□□□ -0.69
SPTLC1-204ENST00000469778 BDH1Q02338 343 aa10.77□□□□□ -0.69
SPTLC1-204ENST00000469778 RIPPLY1Q0D2K3 151 aa10.77□□□□□ -0.69
SPTLC1-204ENST00000469778 ALKBH1Q13686 389 aaKnown RBP10.77□□□□□ -0.69
SPTLC1-204ENST00000469778 TESK1Q15569 626 aa10.77□□□□□ -0.69
SPTLC1-204ENST00000469778 PRSS48Q7RTY5 328 aa10.77□□□□□ -0.69
SPTLC1-204ENST00000469778 NANOGP1Q8N7R0 232 aa10.77□□□□□ -0.69
SPTLC1-204ENST00000469778 SEMA6DQ8NFY4 1073 aa10.77□□□□□ -0.69
SPTLC1-204ENST00000469778 ERGIC1Q969X5 290 aa10.77□□□□□ -0.69
SPTLC1-204ENST00000469778 MND1Q9BWT6 205 aa10.77□□□□□ -0.69
SPTLC1-204ENST00000469778 POFUT1Q9H488 388 aa10.77□□□□□ -0.69
SPTLC1-204ENST00000469778 GPR84Q9NQS5 396 aa10.77□□□□□ -0.69
SPTLC1-204ENST00000469778 DLL4Q9NR61 685 aa10.77□□□□□ -0.69
SPTLC1-204ENST00000469778 DECR2Q9NUI1 292 aa10.77□□□□□ -0.69
SPTLC1-204ENST00000469778 MYEF2Q9P2K5 600 aaKnown RBP10.77□□□□□ -0.69
SPTLC1-204ENST00000469778 IL19Q9UHD0 177 aa10.77□□□□□ -0.69
SPTLC1-204ENST00000469778 SLC22A13Q9Y226 551 aa10.77□□□□□ -0.69
SPTLC1-204ENST00000469778 ANKRD17O75179 2603 aaKnown RBP10.77□□□□□ -0.69
SPTLC1-204ENST00000469778 NBPF19A0A087WUL8 3843 aa10.77□□□□□ -0.69
SPTLC1-204ENST00000469778 A0A1B0GVI7 797 aa10.76□□□□□ -0.69
SPTLC1-204ENST00000469778 NDUFS8O00217 210 aa10.76□□□□□ -0.69
SPTLC1-204ENST00000469778 MYL12BO14950 172 aa10.76□□□□□ -0.69
SPTLC1-204ENST00000469778 OGG1O15527 345 aa10.76□□□□□ -0.69
SPTLC1-204ENST00000469778 CD1AP06126 327 aa10.76□□□□□ -0.69
SPTLC1-204ENST00000469778 NAT2P11245 290 aa10.76□□□□□ -0.69
SPTLC1-204ENST00000469778 C21orf33P30042 268 aaPredicted RBP10.76□□□□□ -0.69
SPTLC1-204ENST00000469778 GNALP38405 381 aa10.76□□□□□ -0.69
SPTLC1-204ENST00000469778 CDKN1AP38936 164 aa10.76□□□□□ -0.69
SPTLC1-204ENST00000469778 SRP9P49458 86 aaKnown RBP10.76□□□□□ -0.69
SPTLC1-204ENST00000469778 WNT4P56705 351 aa10.76□□□□□ -0.69
SPTLC1-204ENST00000469778 MFGE8Q08431 387 aaPredicted RBP10.76□□□□□ -0.69
SPTLC1-204ENST00000469778 ACSM1Q08AH1 577 aa10.76□□□□□ -0.69
SPTLC1-204ENST00000469778 GPR50Q13585 617 aa10.76□□□□□ -0.69
SPTLC1-204ENST00000469778 COMMD2Q86X83 199 aa10.76□□□□□ -0.69
SPTLC1-204ENST00000469778 OR2AE1Q8NHA4 323 aa10.76□□□□□ -0.69
SPTLC1-204ENST00000469778 OR51E1Q8TCB6 317 aa10.76□□□□□ -0.69
SPTLC1-204ENST00000469778 TECTBQ96PL2 329 aa10.76□□□□□ -0.69
SPTLC1-204ENST00000469778 TTTY10Q9BZA0 68 aa10.76□□□□□ -0.69
SPTLC1-204ENST00000469778 COMMD4Q9H0A8 199 aa10.76□□□□□ -0.69
SPTLC1-204ENST00000469778 ISG20L2Q9H9L3 353 aaKnown RBP10.76□□□□□ -0.69
SPTLC1-204ENST00000469778 C14orf119Q9NWQ9 140 aa10.76□□□□□ -0.69
SPTLC1-204ENST00000469778 UBAP1Q9NZ09 502 aa10.76□□□□□ -0.69
SPTLC1-204ENST00000469778 FRRS1LQ9P0K9 344 aa10.76□□□□□ -0.69
SPTLC1-204ENST00000469778 HHLA2Q9UM44 414 aa10.76□□□□□ -0.69
SPTLC1-204ENST00000469778 GTF2A1LQ9UNN4 478 aa10.76□□□□□ -0.69
SPTLC1-204ENST00000469778 TRBV2A0A0J9YWF9 115 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 ZNF816-ZNF321PA0A0X1KG74 233 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 A0A1B0GTI1 187 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 ANXA2P2A6NMY6 339 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 OR4C45A6NMZ5 311 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 SYT7O43581 403 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 SERPINA3P01011 423 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 IGHV1-46P01743 117 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 EEF1B2P24534 225 aaKnown RBP10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 CRYBB2P43320 205 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 CDH15P55291 814 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 TMEM33P57088 247 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 SLC3A1Q07837 685 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 IRF3Q14653 427 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 WDR38Q5JTN6 314 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 PRSS35Q8N3Z0 413 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 ZNF485Q8NCK3 441 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 OR2Z1Q8NG97 314 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 OR56B2PQ8NGI1 322 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 OR5AK2Q8NH90 309 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 UBASH3BQ8TF42 649 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 THRSPQ92748 146 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 RDH5Q92781 318 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 RNF166Q96A37 237 aaPredicted RBP10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 ELMOD3Q96FG2 381 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 HIST1H2AAQ96QV6 131 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 MSL2Q9HCI7 577 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 ISYNA1Q9NPH2 558 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 CLEC2DQ9UHP7 191 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 ENPP5Q9UJA9 477 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 V9GYS6 101 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 POLQO75417 2590 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 ARFGEF3Q5TH69 2177 aa10.75□□□□□ -0.69
SPTLC1-204ENST00000469778 PDZD2O15018 2839 aa10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 C5orf63A6NC05 138 aa10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 ZSCAN5BA6NJL1 495 aa10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 TPD52L2O43399 206 aaKnown RBP10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 SPRY3O43610 288 aa10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 PTBP3O95758 552 aaKnown RBP10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 IGHV4-39P01824 125 aa10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 DAOP14920 347 aa10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 ACHEP22303 614 aa10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 PSMB10P40306 273 aa10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 GATA4P43694 442 aa10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 ART1P52961 327 aa10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 TNFAIP6P98066 277 aaPredicted RBP10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 MVKQ03426 396 aa10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 SPHARQ15513 63 aa10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 OR8G1Q15617 311 aa10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 GFOD2Q3B7J2 385 aa10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 ALKBH6Q3KRA9 238 aa10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 OR2G6Q5TZ20 316 aa10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 Q6ZR03 302 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms