RNA–Protein interactions for RNA: ENST00000469543.5

VIM-203, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 2,666 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-203ENST00000469543 CDC14BO60729 498 aa16.79■□□□□ 0.28
VIM-203ENST00000469543 RP2O75695 350 aa16.79■□□□□ 0.28
VIM-203ENST00000469543 RFPL3SP0C7P2 107 aa16.79■□□□□ 0.28
VIM-203ENST00000469543 IL13RA1P78552 427 aa16.79■□□□□ 0.28
VIM-203ENST00000469543 ENDOGQ14249 297 aaKnown RBP16.79■□□□□ 0.28
VIM-203ENST00000469543 UBE2V2Q15819 145 aa16.79■□□□□ 0.28
VIM-203ENST00000469543 CLPPQ16740 277 aaPredicted RBP16.79■□□□□ 0.28
VIM-203ENST00000469543 MICBQ29980 383 aa16.79■□□□□ 0.28
VIM-203ENST00000469543 ANGPTL6Q8NI99 470 aa16.79■□□□□ 0.28
VIM-203ENST00000469543 CCDC107Q8WV48 283 aa16.79■□□□□ 0.28
VIM-203ENST00000469543 A0A0A6YYH2 397 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 NSG1A0A0A6YYJ2 146 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 A6NJ64 397 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 MELTFP08582 738 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 ADH6P28332 368 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 CASRP41180 1078 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 SSR4P51571 173 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 ATP1B3P54709 279 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 IKZF1Q13422 519 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 ZNF660Q6AZW8 331 aaPredicted RBP16.78■□□□□ 0.28
VIM-203ENST00000469543 ZIC4Q8N9L1 334 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 NAXEQ8NCW5 288 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 OR2AE1Q8NHA4 323 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 SLC25A43Q8WUT9 341 aaPredicted RBP16.78■□□□□ 0.28
VIM-203ENST00000469543 RAB3CQ96E17 227 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 FBXO17Q96EF6 278 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 PGAM5Q96HS1 289 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 DOCK7Q96N67 2140 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 FREM1Q5H8C1 2179 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 DISC1C4P0D8 188 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 NPIPA2E9PIF3 369 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 NPIPA3F8WFD2 350 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 SDCBPO00560 298 aaPredicted RBP16.78■□□□□ 0.28
VIM-203ENST00000469543 OTX2P32243 289 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 NPY4RP50391 375 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 Q0VFX4 171 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 OPN5Q6U736 354 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 ADPRHL1Q8NDY3 354 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 OR14K1Q8NGZ2 314 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 OR4K15Q8NH41 348 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 PIGTQ969N2 578 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 ST6GALNAC5Q9BVH7 336 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 ANGPTL4Q9BY76 406 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 HPF1Q9NWY4 346 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 DKKL1Q9UK85 242 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 TECTAO75443 2155 aa16.78■□□□□ 0.28
VIM-203ENST00000469543 EEF1E1-BLOC1S5C9J1V9 151 aa16.77■□□□□ 0.28
VIM-203ENST00000469543 STMND1H3BQB6 276 aa16.77■□□□□ 0.28
VIM-203ENST00000469543 NTN3O00634 580 aaPredicted RBP16.77■□□□□ 0.28
VIM-203ENST00000469543 ZBTB25P24278 435 aa16.77■□□□□ 0.28
VIM-203ENST00000469543 ZFP36L1Q07352 338 aaKnown RBP16.77■□□□□ 0.28
VIM-203ENST00000469543 SNAI3Q3KNW1 292 aa16.77■□□□□ 0.28
VIM-203ENST00000469543 OR9K2Q8NGE7 335 aa16.77■□□□□ 0.28
VIM-203ENST00000469543 OR2Y1Q8NGV0 311 aa16.77■□□□□ 0.28
VIM-203ENST00000469543 PPP1R1CQ8WVI7 109 aa16.77■□□□□ 0.28
VIM-203ENST00000469543 NABP1Q96AH0 204 aa16.77■□□□□ 0.28
VIM-203ENST00000469543 GUCD1Q96NT3 240 aa16.77■□□□□ 0.28
VIM-203ENST00000469543 TMEM59Q9BXS4 323 aa16.77■□□□□ 0.28
VIM-203ENST00000469543 ZNF700Q9H0M5 742 aa16.77■□□□□ 0.28
VIM-203ENST00000469543 SLC39A1Q9NY26 324 aa16.77■□□□□ 0.28
VIM-203ENST00000469543 PISDQ9UG56 409 aa16.77■□□□□ 0.28
VIM-203ENST00000469543 C9orf170A2RU37 121 aa16.77■□□□□ 0.27
VIM-203ENST00000469543 KISS1Q15726 138 aa16.77■□□□□ 0.27
VIM-203ENST00000469543 TMEM105Q8N8V8 129 aa16.77■□□□□ 0.27
VIM-203ENST00000469543 ROBO4Q8WZ75 1007 aa16.77■□□□□ 0.27
VIM-203ENST00000469543 ZNF581Q9P0T4 197 aa16.77■□□□□ 0.27
VIM-203ENST00000469543 DOCK10Q96BY6 2186 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 OR6C65A6NJZ3 312 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 RFPL4AA6NLU0 287 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 RFPL4AL1F8VTS6 287 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 SIGLEC5O15389 551 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 PLATP00750 562 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 IFNA6P05013 189 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 TDGF1P13385 188 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 MSR1P21757 451 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 GUCA1AP43080 201 aaPredicted RBP16.76■□□□□ 0.27
VIM-203ENST00000469543 SIGLEC14Q08ET2 396 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 TMEM65Q6PI78 240 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 SLC25A42Q86VD7 318 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 OR5M8Q8NGP6 311 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 LRRC20Q8TCA0 184 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 PAQR8Q8TEZ7 354 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 RBPMSQ93062 196 aaKnown RBP16.76■□□□□ 0.27
VIM-203ENST00000469543 LINC00052Q96N35 136 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 PRRT1Q99946 306 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 REG4Q9BYZ8 158 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 ELL3Q9HB65 397 aaPredicted RBP16.76■□□□□ 0.27
VIM-203ENST00000469543 PLEK2Q9NYT0 353 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 TMEM265A0A087WTH1 108 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 ARPC4-TTLL3A0A0A6YYG9 625 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 C9J4A7 227 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 EFSO43281 561 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 SERPINA2P20848 420 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 GMFBP60983 142 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 GK2Q14410 553 aaPredicted RBP16.76■□□□□ 0.27
VIM-203ENST00000469543 SUN5Q8TC36 379 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 FBXW5Q969U6 566 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 NELFAQ9H3P2 528 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 SDHAF2Q9NX18 166 aa16.76■□□□□ 0.27
VIM-203ENST00000469543 C13orf42A0A1B0GVH6 325 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms