RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 RHNO1Q9BSD3 238 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 SOX7Q9BT81 388 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 EGLN1Q9GZT9 426 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 SLC22A4Q9H015 551 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 SAP30LQ9HAJ7 183 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 GPR84Q9NQS5 396 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 PSORS1C1Q9UIG5 152 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 DIMT1Q9UNQ2 313 aaKnown RBP10.15□□□□□ -0.78
VPS13D-204ENST00000469054 TRIM64A6NGJ6 449 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 TRIM64BA6NI03 449 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 ANKRD30BLA7E2S9 258 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 LYNX1G3V0Z9 82 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 H0YL77 283 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 NDUFS8O00217 210 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 MLNRO43193 412 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 HLA-DPB1P04440 258 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 LIMS3P0CW19 117 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 LIMS4P0CW20 117 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 LYNX1P0DP58 116 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 ATP6V1B1P15313 513 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 MYL12AP19105 171 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 ACHEP22303 614 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 CA6P23280 308 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 ST3GAL4Q11206 333 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 SNCBQ16143 134 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 CARTPTQ16568 116 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 SPRNQ5BIV9 151 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 FDX2Q6P4F2 183 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 COMMD2Q86X83 199 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 PRSS35Q8N3Z0 413 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 ZNF540Q8NDQ6 660 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 OR10AD1Q8NGE0 317 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 OR2G2Q8NGZ5 317 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 C10orf105Q8TEF2 133 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 YIPF5Q969M3 257 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 ITFG2Q969R8 447 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 PELI1Q96FA3 418 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 ZNF184Q99676 751 aaPredicted RBP10.14□□□□□ -0.79
VPS13D-204ENST00000469054 RASSF4Q9H2L5 321 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 ISG20L2Q9H9L3 353 aaKnown RBP10.14□□□□□ -0.79
VPS13D-204ENST00000469054 DLL4Q9NR61 685 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 FKBP14Q9NWM8 211 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 CHCHD3Q9NX63 227 aaKnown RBP10.14□□□□□ -0.79
VPS13D-204ENST00000469054 IL19Q9UHD0 177 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 SLC22A13Q9Y226 551 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 CAB39Q9Y376 341 aaPredicted RBP10.14□□□□□ -0.79
VPS13D-204ENST00000469054 EXOSC1Q9Y3B2 195 aaKnown RBP10.14□□□□□ -0.79
VPS13D-204ENST00000469054 NOP16Q9Y3C1 178 aaKnown RBP10.14□□□□□ -0.79
VPS13D-204ENST00000469054 AKAP9Q99996 3911 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 LRBAP50851 2863 aa10.14□□□□□ -0.79
VPS13D-204ENST00000469054 IGHV4-30-2A0A087WSY4 118 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 IGHV1-69-2A0A0G2JMI3 117 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 GMDSO60547 372 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 CDC14BO60729 498 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 MTRF1O75570 445 aaKnown RBP10.13□□□□□ -0.79
VPS13D-204ENST00000469054 HTR1AP08908 422 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 TNFRSF1AP19438 455 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 ACKR3P25106 362 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 CRYBB2P43320 205 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 MAP2K3P46734 347 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 SRP9P49458 86 aaKnown RBP10.13□□□□□ -0.79
VPS13D-204ENST00000469054 ETV1P50549 477 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 NANOS3P60323 173 aaKnown RBP10.13□□□□□ -0.79
VPS13D-204ENST00000469054 MVKQ03426 396 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 MRPL28Q13084 256 aaKnown RBP10.13□□□□□ -0.79
VPS13D-204ENST00000469054 MED21Q13503 144 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 WDR38Q5JTN6 314 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 TMPRSS11AQ6ZMR5 421 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 AHSA2Q719I0 299 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 KLBQ86Z14 1044 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 STX19Q8N4C7 294 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 FTMTQ8N4E7 242 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 SPERTQ8NA61 448 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 PLPP7Q8NBV4 271 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 SEMA6DQ8NFY4 1073 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 HAVCR2Q8TDQ0 301 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 ITLN1Q8WWA0 313 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 FAM71F1Q96KD3 344 aaPredicted RBP10.13□□□□□ -0.79
VPS13D-204ENST00000469054 MEGF10Q96KG7 1140 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 CNBD2Q96M20 576 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 OR2V2Q96R30 315 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 CHODLQ9H9P2 273 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 SCN3BQ9NY72 215 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 FRRS1LQ9P0K9 344 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 CLEC2DQ9UHP7 191 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 RHBDD3Q9Y3P4 386 aa10.13□□□□□ -0.79
VPS13D-204ENST00000469054 MYO9AB2RTY4 2548 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 A0A1B0GTI1 187 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 PTGES3LE9PB15 166 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 F5H5P2 479 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 SLC1A7O00341 560 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 P2RY10O00398 339 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 RP2O75695 350 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 DHRS3O75911 302 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 CST4P01036 141 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 CCDC159P0C7I6 412 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 SLC25A16P16260 332 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 CCL1P22362 96 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 GIFP27352 417 aa10.12□□□□□ -0.79
VPS13D-204ENST00000469054 C21orf33P30042 268 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms