RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 ARSBP15848 533 aa16.46■□□□□ 0.23
SMC4-209ENST00000468653 HOXC12P31275 282 aa16.46■□□□□ 0.23
SMC4-209ENST00000468653 NR4A2P43354 598 aa16.46■□□□□ 0.23
SMC4-209ENST00000468653 PITPNAQ00169 270 aa16.46■□□□□ 0.23
SMC4-209ENST00000468653 ZNF92Q03936 586 aa16.46■□□□□ 0.23
SMC4-209ENST00000468653 SCN1BQ07699 218 aa16.46■□□□□ 0.23
SMC4-209ENST00000468653 RIPPLY1Q0D2K3 151 aa16.46■□□□□ 0.23
SMC4-209ENST00000468653 PRR30Q53SZ7 412 aaPredicted RBP16.46■□□□□ 0.23
SMC4-209ENST00000468653 DCDC5Q6ZRR9 648 aa16.46■□□□□ 0.23
SMC4-209ENST00000468653 OR5AS1Q8N127 324 aa16.46■□□□□ 0.23
SMC4-209ENST00000468653 NAXEQ8NCW5 288 aa16.46■□□□□ 0.23
SMC4-209ENST00000468653 C1orf162Q8NEQ5 155 aaPredicted RBP16.46■□□□□ 0.23
SMC4-209ENST00000468653 MS4A3Q96HJ5 214 aa16.46■□□□□ 0.23
SMC4-209ENST00000468653 UQCC2Q9BRT2 126 aa16.46■□□□□ 0.23
SMC4-209ENST00000468653 CNTD2Q9H8S5 307 aa16.46■□□□□ 0.23
SMC4-209ENST00000468653 NCOR2Q9Y618 2525 aa16.46■□□□□ 0.23
SMC4-209ENST00000468653 A0A1W2PQ09 198 aa16.46■□□□□ 0.22
SMC4-209ENST00000468653 A0A1W2PR80 420 aa16.46■□□□□ 0.22
SMC4-209ENST00000468653 ZNF93P35789 620 aaPredicted RBP16.46■□□□□ 0.22
SMC4-209ENST00000468653 TRIQKQ629K1 86 aa16.46■□□□□ 0.22
SMC4-209ENST00000468653 BEND4Q6ZU67 534 aa16.46■□□□□ 0.22
SMC4-209ENST00000468653 UTS2BQ765I0 119 aa16.46■□□□□ 0.22
SMC4-209ENST00000468653 LYPD6Q86Y78 171 aa16.46■□□□□ 0.22
SMC4-209ENST00000468653 DOLPP1Q86YN1 238 aa16.46■□□□□ 0.22
SMC4-209ENST00000468653 APOBEC3DQ96AK3 386 aaPredicted RBP16.46■□□□□ 0.22
SMC4-209ENST00000468653 HAVCR1Q96D42 359 aa16.46■□□□□ 0.22
SMC4-209ENST00000468653 CHST5Q9GZS9 411 aa16.46■□□□□ 0.22
SMC4-209ENST00000468653 BOD1L1Q8NFC6 3051 aa16.46■□□□□ 0.22
SMC4-209ENST00000468653 ACKR3P25106 362 aa16.45■□□□□ 0.22
SMC4-209ENST00000468653 GSK3AP49840 483 aa16.45■□□□□ 0.22
SMC4-209ENST00000468653 CAPZA1P52907 286 aa16.45■□□□□ 0.22
SMC4-209ENST00000468653 MALLQ13021 153 aa16.45■□□□□ 0.22
SMC4-209ENST00000468653 P2RY6Q15077 328 aa16.45■□□□□ 0.22
SMC4-209ENST00000468653 CXorf67Q86X51 503 aaPredicted RBP16.45■□□□□ 0.22
SMC4-209ENST00000468653 IZUMO1Q8IYV9 350 aa16.45■□□□□ 0.22
SMC4-209ENST00000468653 MINDY2Q8NBR6 621 aa16.45■□□□□ 0.22
SMC4-209ENST00000468653 SLC30A7Q8NEW0 376 aa16.45■□□□□ 0.22
SMC4-209ENST00000468653 OR4D6Q8NGJ1 314 aa16.45■□□□□ 0.22
SMC4-209ENST00000468653 SPACA5Q96QH8 159 aa16.45■□□□□ 0.22
SMC4-209ENST00000468653 ABHD1Q96SE0 405 aa16.45■□□□□ 0.22
SMC4-209ENST00000468653 RABL2AQ9UBK7 228 aaPredicted RBP16.45■□□□□ 0.22
SMC4-209ENST00000468653 RABL2BQ9UNT1 228 aa16.45■□□□□ 0.22
SMC4-209ENST00000468653 IGKV1-9A0A0C4DH69 117 aa16.44■□□□□ 0.22
SMC4-209ENST00000468653 TMEM272A0A1B0GTI8 110 aa16.44■□□□□ 0.22
SMC4-209ENST00000468653 hCG_38984A0A1B0GV85 526 aa16.44■□□□□ 0.22
SMC4-209ENST00000468653 ALDOBP05062 364 aa16.44■□□□□ 0.22
SMC4-209ENST00000468653 GLI4P10075 376 aa16.44■□□□□ 0.22
SMC4-209ENST00000468653 CEACAM8P31997 349 aaPredicted RBP16.44■□□□□ 0.22
SMC4-209ENST00000468653 INPP1P49441 399 aa16.44■□□□□ 0.22
SMC4-209ENST00000468653 FAM3AP98173 230 aa16.44■□□□□ 0.22
SMC4-209ENST00000468653 PLA2G7Q13093 441 aa16.44■□□□□ 0.22
SMC4-209ENST00000468653 OXA1LQ15070 435 aa16.44■□□□□ 0.22
SMC4-209ENST00000468653 TAB1Q15750 504 aa16.44■□□□□ 0.22
SMC4-209ENST00000468653 CDH26Q8IXH8 852 aa16.44■□□□□ 0.22
SMC4-209ENST00000468653 C19orf18Q8NEA5 215 aa16.44■□□□□ 0.22
SMC4-209ENST00000468653 SPSB4Q96A44 273 aa16.44■□□□□ 0.22
SMC4-209ENST00000468653 SFXN3Q9BWM7 321 aa16.44■□□□□ 0.22
SMC4-209ENST00000468653 KCNK15Q9H427 330 aa16.44■□□□□ 0.22
SMC4-209ENST00000468653 LINC00854A0A1B0GVQ3 168 aa16.43■□□□□ 0.22
SMC4-209ENST00000468653 HOXD11P31277 338 aaPredicted RBP16.43■□□□□ 0.22
SMC4-209ENST00000468653 RANBP1P43487 201 aa16.43■□□□□ 0.22
SMC4-209ENST00000468653 PRSS12P56730 875 aa16.43■□□□□ 0.22
SMC4-209ENST00000468653 RBPJQ06330 500 aa16.43■□□□□ 0.22
SMC4-209ENST00000468653 KLRB1Q12918 225 aa16.43■□□□□ 0.22
SMC4-209ENST00000468653 UBE2V2Q15819 145 aa16.43■□□□□ 0.22
SMC4-209ENST00000468653 TBC1D28Q2M2D7 210 aa16.43■□□□□ 0.22
SMC4-209ENST00000468653 TMEM69Q5SWH9 247 aa16.43■□□□□ 0.22
SMC4-209ENST00000468653 Q6ZNX1 250 aa16.43■□□□□ 0.22
SMC4-209ENST00000468653 SETD6Q8TBK2 473 aa16.43■□□□□ 0.22
SMC4-209ENST00000468653 NPRL2Q8WTW4 380 aa16.43■□□□□ 0.22
SMC4-209ENST00000468653 PHF21AQ96BD5 680 aa16.43■□□□□ 0.22
SMC4-209ENST00000468653 BOD1Q96IK1 185 aa16.43■□□□□ 0.22
SMC4-209ENST00000468653 ZNF75AQ96N20 296 aa16.43■□□□□ 0.22
SMC4-209ENST00000468653 GPER1Q99527 375 aa16.43■□□□□ 0.22
SMC4-209ENST00000468653 INTS1Q8N201 2190 aaKnown RBP16.43■□□□□ 0.22
SMC4-209ENST00000468653 hCG_2014768A0A024R1R8 64 aa16.43■□□□□ 0.22
SMC4-209ENST00000468653 ALX3O95076 343 aa16.43■□□□□ 0.22
SMC4-209ENST00000468653 ZNF14P17017 642 aaPredicted RBP16.43■□□□□ 0.22
SMC4-209ENST00000468653 CDK2P24941 298 aa16.43■□□□□ 0.22
SMC4-209ENST00000468653 EFNB2P52799 333 aa16.43■□□□□ 0.22
SMC4-209ENST00000468653 TNK1Q13470 666 aa16.43■□□□□ 0.22
SMC4-209ENST00000468653 DMRTC1Q5HYR2 192 aa16.43■□□□□ 0.22
SMC4-209ENST00000468653 TINAGQ9UJW2 476 aa16.43■□□□□ 0.22
SMC4-209ENST00000468653 TBC1D24Q9ULP9 559 aa16.43■□□□□ 0.22
SMC4-209ENST00000468653 ZNF835Q9Y2P0 537 aa16.43■□□□□ 0.22
SMC4-209ENST00000468653 RHBDD3Q9Y3P4 386 aa16.43■□□□□ 0.22
SMC4-209ENST00000468653 PRF1P14222 555 aa16.42■□□□□ 0.22
SMC4-209ENST00000468653 PLA2G5P39877 138 aa16.42■□□□□ 0.22
SMC4-209ENST00000468653 IDH3GP51553 393 aaPredicted RBP16.42■□□□□ 0.22
SMC4-209ENST00000468653 PMPCAQ10713 525 aa16.42■□□□□ 0.22
SMC4-209ENST00000468653 MRPL49Q13405 166 aaKnown RBP16.42■□□□□ 0.22
SMC4-209ENST00000468653 OR8B8Q15620 311 aa16.42■□□□□ 0.22
SMC4-209ENST00000468653 AWAT2Q6E213 333 aa16.42■□□□□ 0.22
SMC4-209ENST00000468653 BHLHA15Q7RTS1 189 aaPredicted RBP16.42■□□□□ 0.22
SMC4-209ENST00000468653 MRPL21Q7Z2W9 205 aaKnown RBP16.42■□□□□ 0.22
SMC4-209ENST00000468653 ANGPTL5Q86XS5 388 aa16.42■□□□□ 0.22
SMC4-209ENST00000468653 C17orf78Q8N4C9 275 aa16.42■□□□□ 0.22
SMC4-209ENST00000468653 WDR31Q8NA23 367 aa16.42■□□□□ 0.22
SMC4-209ENST00000468653 RFT1Q96AA3 541 aa16.42■□□□□ 0.22
SMC4-209ENST00000468653 COX4I2Q96KJ9 171 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms