RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 CENPNQ96H22 339 aaPredicted RBP9.67□□□□□ -0.86
CDHR3-205ENST00000468143 PKP2Q99959 881 aa9.67□□□□□ -0.86
CDHR3-205ENST00000468143 GABARAPL1Q9H0R8 117 aa9.67□□□□□ -0.86
CDHR3-205ENST00000468143 RIBC2Q9H4K1 309 aa9.67□□□□□ -0.86
CDHR3-205ENST00000468143 FN3KRPQ9HA64 309 aa9.67□□□□□ -0.86
CDHR3-205ENST00000468143 RNF7Q9UBF6 113 aa9.67□□□□□ -0.86
CDHR3-205ENST00000468143 OPN4Q9UHM6 478 aa9.67□□□□□ -0.86
CDHR3-205ENST00000468143 OAZ3Q9UMX2 235 aa9.67□□□□□ -0.86
CDHR3-205ENST00000468143 COPS3Q9UNS2 423 aa9.67□□□□□ -0.86
CDHR3-205ENST00000468143 RHBDD3Q9Y3P4 386 aa9.67□□□□□ -0.86
CDHR3-205ENST00000468143 LRP12Q9Y561 859 aa9.67□□□□□ -0.86
CDHR3-205ENST00000468143 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.66□□□□□ -0.86
CDHR3-205ENST00000468143 A6NLC8 198 aa9.66□□□□□ -0.86
CDHR3-205ENST00000468143 F5H0A9 414 aaPredicted RBP9.66□□□□□ -0.86
CDHR3-205ENST00000468143 CD80P33681 288 aa9.66□□□□□ -0.86
CDHR3-205ENST00000468143 DDOSTP39656 456 aa9.66□□□□□ -0.86
CDHR3-205ENST00000468143 POU4F2Q12837 409 aa9.66□□□□□ -0.86
CDHR3-205ENST00000468143 ZNF404Q494X3 552 aa9.66□□□□□ -0.86
CDHR3-205ENST00000468143 ESCO2Q56NI9 601 aa9.66□□□□□ -0.86
CDHR3-205ENST00000468143 AADACL4Q5VUY2 407 aa9.66□□□□□ -0.86
CDHR3-205ENST00000468143 LIPNQ5VXI9 398 aa9.66□□□□□ -0.86
CDHR3-205ENST00000468143 WDR86Q86TI4 376 aa9.66□□□□□ -0.86
CDHR3-205ENST00000468143 RFLNBQ8N5W9 214 aa9.66□□□□□ -0.86
CDHR3-205ENST00000468143 SPERTQ8NA61 448 aa9.66□□□□□ -0.86
CDHR3-205ENST00000468143 OR8B12Q8NGG6 310 aa9.66□□□□□ -0.86
CDHR3-205ENST00000468143 TMEM163Q8TC26 289 aa9.66□□□□□ -0.86
CDHR3-205ENST00000468143 Q8TCH9 128 aa9.66□□□□□ -0.86
CDHR3-205ENST00000468143 ERGIC1Q969X5 290 aa9.66□□□□□ -0.86
CDHR3-205ENST00000468143 LYZL4Q96KX0 146 aa9.66□□□□□ -0.86
CDHR3-205ENST00000468143 SSBP3Q9BWW4 388 aaPredicted RBP9.66□□□□□ -0.86
CDHR3-205ENST00000468143 PRRG3Q9BZD7 231 aa9.66□□□□□ -0.86
CDHR3-205ENST00000468143 YIPF3Q9GZM5 350 aa9.66□□□□□ -0.86
CDHR3-205ENST00000468143 OPA3Q9H6K4 179 aa9.66□□□□□ -0.86
CDHR3-205ENST00000468143 MIOXQ9UGB7 285 aa9.66□□□□□ -0.86
CDHR3-205ENST00000468143 NOP16Q9Y3C1 178 aaKnown RBP9.66□□□□□ -0.86
CDHR3-205ENST00000468143 DYSFO75923 2080 aa9.66□□□□□ -0.86
CDHR3-205ENST00000468143 hCG_1807616A0A1W2PRN6 198 aa9.65□□□□□ -0.86
CDHR3-205ENST00000468143 C3orf80F5H4A9 247 aa9.65□□□□□ -0.86
CDHR3-205ENST00000468143 H3BNX3 289 aa9.65□□□□□ -0.86
CDHR3-205ENST00000468143 J3QLI3 93 aa9.65□□□□□ -0.86
CDHR3-205ENST00000468143 TCF21O43680 179 aa9.65□□□□□ -0.86
CDHR3-205ENST00000468143 EPHA1P21709 976 aa9.65□□□□□ -0.86
CDHR3-205ENST00000468143 GNALP38405 381 aa9.65□□□□□ -0.86
CDHR3-205ENST00000468143 ACTR3P61158 418 aa9.65□□□□□ -0.86
CDHR3-205ENST00000468143 GNB2P62879 340 aa9.65□□□□□ -0.86
CDHR3-205ENST00000468143 ZNF154Q13106 437 aa9.65□□□□□ -0.86
CDHR3-205ENST00000468143 OR8B8Q15620 311 aa9.65□□□□□ -0.86
CDHR3-205ENST00000468143 NXNL2Q5VZ03 156 aa9.65□□□□□ -0.86
CDHR3-205ENST00000468143 KCTD18Q6PI47 426 aaPredicted RBP9.65□□□□□ -0.86
CDHR3-205ENST00000468143 C11orf53Q8IXP5 236 aa9.65□□□□□ -0.86
CDHR3-205ENST00000468143 OR8B3Q8NGG8 313 aa9.65□□□□□ -0.86
CDHR3-205ENST00000468143 C22orf15Q8WYQ4 148 aa9.65□□□□□ -0.86
CDHR3-205ENST00000468143 PIGCQ92535 297 aa9.65□□□□□ -0.86
CDHR3-205ENST00000468143 NEIL1Q96FI4 390 aaPredicted RBP9.65□□□□□ -0.86
CDHR3-205ENST00000468143 OR8B2Q96RD0 313 aa9.65□□□□□ -0.86
CDHR3-205ENST00000468143 CNN2Q99439 309 aaKnown RBP9.65□□□□□ -0.86
CDHR3-205ENST00000468143 APOL4Q9BPW4 351 aa9.65□□□□□ -0.86
CDHR3-205ENST00000468143 PAPOLGQ9BWT3 736 aaKnown RBP9.65□□□□□ -0.86
CDHR3-205ENST00000468143 OSBPL10Q9BXB5 764 aa9.65□□□□□ -0.86
CDHR3-205ENST00000468143 MROQ9BYG7 248 aa9.65□□□□□ -0.86
CDHR3-205ENST00000468143 RASSF4Q9H2L5 321 aa9.65□□□□□ -0.86
CDHR3-205ENST00000468143 C14orf119Q9NWQ9 140 aa9.65□□□□□ -0.86
CDHR3-205ENST00000468143 OR5V1Q9UGF6 321 aa9.65□□□□□ -0.86
CDHR3-205ENST00000468143 IKZF2Q9UKS7 526 aa9.65□□□□□ -0.86
CDHR3-205ENST00000468143 INSIG2Q9Y5U4 225 aa9.65□□□□□ -0.86
CDHR3-205ENST00000468143 TANC2Q9HCD6 1990 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 IGHV3OR15-7A0A075B7D8 119 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 TMEM269A0A1B0GVZ9 245 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 ZNF850A8MQ14 1090 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 VENTXO95231 258 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 APOL3O95236 402 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 PTBP3O95758 552 aaKnown RBP9.64□□□□□ -0.87
CDHR3-205ENST00000468143 ZNF12P17014 697 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 EGR1P18146 543 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 CFL1P23528 166 aaKnown RBP9.64□□□□□ -0.87
CDHR3-205ENST00000468143 GATA3P23771 443 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 ACKR3P25106 362 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 PSMA6P60900 246 aaKnown RBP9.64□□□□□ -0.87
CDHR3-205ENST00000468143 CXCR4P61073 352 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 CSNK2BP67870 215 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 PRDX4Q13162 271 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 ZIK1Q3SY52 487 aaPredicted RBP9.64□□□□□ -0.87
CDHR3-205ENST00000468143 DMRTC1Q5HYR2 192 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 PLEKHG7Q6ZR37 379 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 C1QL2Q7Z5L3 287 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 SLC35F2Q8IXU6 374 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 GCSAMQ8N6F7 178 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 PLPP7Q8NBV4 271 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 OR1M1Q8NGA1 313 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 OR51G2Q8NGK0 314 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 SPATA3Q8NHX4 192 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 NANPQ8TBE9 248 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 UBE2FQ969M7 185 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 OR8B4Q96RC9 309 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 TBX5Q99593 518 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 C19orf24Q9BVV8 132 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 PBOV1Q9GZY1 135 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 RGCCQ9H4X1 137 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 NIPAL2Q9H841 368 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 ADGRL4Q9HBW9 690 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms