RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 LINC00854A0A1B0GVQ3 168 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 KRBOX1C9JBD0 128 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 RRP8O43159 456 aaKnown RBP2.6□□□□□ -1.99
VPS13A-209ENST00000467124 CTNSO60931 367 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 SC5DO75845 299 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 SLC22A5O76082 557 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 LIPCP11150 499 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 GALR1P47211 349 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 HCCSP53701 268 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 HADHBP55084 474 aaKnown RBP2.6□□□□□ -1.99
VPS13A-209ENST00000467124 CRADDP78560 199 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 OR1Q1Q15612 314 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 Q3ZCU0 254 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 FBXO48Q5FWF7 155 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 AVPI1Q5T686 147 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 KDM4DQ6B0I6 523 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 C16orf87Q6PH81 154 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 EPGNQ6UW88 154 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 Q8N9L7 120 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 CDS1Q92903 461 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 CAMK2N2Q96S95 79 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 RBBP8Q99708 897 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 SAMD10Q9BYL1 202 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 PORCNQ9H237 461 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 ARV1Q9H2C2 271 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 RPP21Q9H633 154 aaKnown RBP2.6□□□□□ -1.99
VPS13A-209ENST00000467124 HMG20AQ9NP66 347 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 GGA2Q9UJY4 613 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 KLK12Q9UKR0 248 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 NDRG2Q9UN36 371 aaKnown RBP2.6□□□□□ -1.99
VPS13A-209ENST00000467124 FARSAQ9Y285 508 aaKnown RBP2.6□□□□□ -1.99
VPS13A-209ENST00000467124 KLF12Q9Y4X4 402 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 PRRC2AP48634 2157 aaKnown RBP2.6□□□□□ -1.99
VPS13A-209ENST00000467124 TNS2Q63HR2 1409 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 IGLV1-50A0A075B6I6 118 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 IGKV6D-21A0A0A0MT36 114 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 IGHV3OR16-9A0A0B4J2B5 98 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 ZNF705GA8MUZ8 300 aaPredicted RBP2.59□□□□□ -1.99
VPS13A-209ENST00000467124 SNAI2O43623 268 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 TRAPPC6AO75865 159 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 CTDNEP1O95476 244 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 APCSP02743 223 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 CCNOP22674 350 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 LOXP28300 417 aaPredicted RBP2.59□□□□□ -1.99
VPS13A-209ENST00000467124 GPR4P46093 362 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 GFERP55789 205 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 TAS2R31P59538 309 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 OR2B8PP59922 312 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 PSMC5P62195 406 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 RPL31P62899 125 aaKnown RBP2.59□□□□□ -1.99
VPS13A-209ENST00000467124 LOXL1Q08397 574 aaPredicted RBP2.59□□□□□ -1.99
VPS13A-209ENST00000467124 GPR176Q14439 515 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 SHHQ15465 462 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 TAL2Q16559 108 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 ZNF684Q5T5D7 378 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 CPTPQ5TA50 214 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 OPN5Q6U736 354 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 RTL4Q6ZR62 310 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 PID1Q7Z2X4 250 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 ZNF695Q8IW36 515 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 TCAIMQ8N3R3 496 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 UBAC2Q8NBM4 344 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 OR1J4Q8NGS1 313 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 TMEM234Q8WY98 164 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 ZNF414Q96IQ9 312 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 Q96MT0 163 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 TMEM175Q9BSA9 504 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 FRMD8P1Q9BZ68 369 aaPredicted RBP2.59□□□□□ -1.99
VPS13A-209ENST00000467124 ZNF430Q9H8G1 570 aaPredicted RBP2.59□□□□□ -1.99
VPS13A-209ENST00000467124 ZNF355PQ9NSJ1 428 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 STMN3Q9NZ72 180 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 ZNRD1Q9P1U0 126 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 ZNF257Q9Y2Q1 563 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 HES2Q9Y543 173 aa2.59□□□□□ -1.99
VPS13A-209ENST00000467124 NACAE9PAV3 2078 aa2.59□□□□□ -2
VPS13A-209ENST00000467124 IGHV1OR15-9A0A0B4J2B8 117 aa2.58□□□□□ -2
VPS13A-209ENST00000467124 TMEM223A0PJW6 202 aa2.58□□□□□ -2
VPS13A-209ENST00000467124 H0YJW9 148 aa2.58□□□□□ -2
VPS13A-209ENST00000467124 RAD1O60671 282 aa2.58□□□□□ -2
VPS13A-209ENST00000467124 GLSO94925 669 aaPredicted RBP2.58□□□□□ -2
VPS13A-209ENST00000467124 PAHP00439 452 aa2.58□□□□□ -2
VPS13A-209ENST00000467124 RHOCP08134 193 aa2.58□□□□□ -2
VPS13A-209ENST00000467124 IGFBP3P17936 291 aaPredicted RBP2.58□□□□□ -2
VPS13A-209ENST00000467124 MNAT1P51948 309 aa2.58□□□□□ -2
VPS13A-209ENST00000467124 TMED1Q13445 227 aa2.58□□□□□ -2
VPS13A-209ENST00000467124 PRSS8Q16651 343 aa2.58□□□□□ -2
VPS13A-209ENST00000467124 C6orf99Q4VX62 202 aa2.58□□□□□ -2
VPS13A-209ENST00000467124 LINC00483Q53H64 154 aa2.58□□□□□ -2
VPS13A-209ENST00000467124 LIN9Q5TKA1 542 aa2.58□□□□□ -2
VPS13A-209ENST00000467124 TMEM236Q5W0B7 351 aa2.58□□□□□ -2
VPS13A-209ENST00000467124 SLC16A13Q7RTY0 426 aa2.58□□□□□ -2
VPS13A-209ENST00000467124 CYB561A3Q8NBI2 242 aa2.58□□□□□ -2
VPS13A-209ENST00000467124 OR6K6Q8NGW6 343 aa2.58□□□□□ -2
VPS13A-209ENST00000467124 CIRBP-AS1Q8TBR5 109 aa2.58□□□□□ -2
VPS13A-209ENST00000467124 MSANTD3Q96H12 275 aa2.58□□□□□ -2
VPS13A-209ENST00000467124 KCNS1Q96KK3 526 aa2.58□□□□□ -2
VPS13A-209ENST00000467124 C18orf15Q96N68 181 aa2.58□□□□□ -2
VPS13A-209ENST00000467124 NAPGQ99747 312 aaPredicted RBP2.58□□□□□ -2
VPS13A-209ENST00000467124 C20orf144Q9BQM9 153 aa2.58□□□□□ -2
VPS13A-209ENST00000467124 YTHDF2Q9Y5A9 579 aaKnown RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms