RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 BPIFB3P59826 476 aa14.59□□□□□ -0.07
COL7A1-206ENST00000466591 RPS7P62081 194 aaKnown RBP14.59□□□□□ -0.07
COL7A1-206ENST00000466591 ZNF770Q6IQ21 691 aaPredicted RBP14.59□□□□□ -0.07
COL7A1-206ENST00000466591 ZNF826PQ6ZT77 177 aa14.59□□□□□ -0.07
COL7A1-206ENST00000466591 KCTD8Q6ZWB6 473 aa14.59□□□□□ -0.07
COL7A1-206ENST00000466591 SHFQ7M4L6 423 aa14.59□□□□□ -0.07
COL7A1-206ENST00000466591 DPY19L4Q7Z388 723 aa14.59□□□□□ -0.07
COL7A1-206ENST00000466591 SCCPDHQ8NBX0 429 aa14.59□□□□□ -0.07
COL7A1-206ENST00000466591 OR52H1Q8NGJ2 320 aa14.59□□□□□ -0.07
COL7A1-206ENST00000466591 GIPC3Q8TF64 312 aa14.59□□□□□ -0.07
COL7A1-206ENST00000466591 ST8SIA4Q92187 359 aa14.59□□□□□ -0.07
COL7A1-206ENST00000466591 MED20Q9H944 212 aa14.59□□□□□ -0.07
COL7A1-206ENST00000466591 NBEAL1Q6ZS30 2694 aa14.58□□□□□ -0.08
COL7A1-206ENST00000466591 IGHV3OR15-7A0A075B7D8 119 aa14.58□□□□□ -0.08
COL7A1-206ENST00000466591 MDFIC2A0A1B0GVS7 189 aa14.58□□□□□ -0.08
COL7A1-206ENST00000466591 TCRBV5S2A0A599 114 aa14.58□□□□□ -0.08
COL7A1-206ENST00000466591 ZNF879B4DU55 563 aa14.58□□□□□ -0.08
COL7A1-206ENST00000466591 PRR23D1E9PI22 279 aaPredicted RBP14.58□□□□□ -0.08
COL7A1-206ENST00000466591 CLDN34H7C241 214 aa14.58□□□□□ -0.08
COL7A1-206ENST00000466591 P2RY10O00398 339 aa14.58□□□□□ -0.08
COL7A1-206ENST00000466591 PLATP00750 562 aa14.58□□□□□ -0.08
COL7A1-206ENST00000466591 PRR23D2P0DMB1 279 aaPredicted RBP14.58□□□□□ -0.08
COL7A1-206ENST00000466591 RAP2AP10114 183 aa14.58□□□□□ -0.08
COL7A1-206ENST00000466591 OTX1P32242 354 aaPredicted RBP14.58□□□□□ -0.08
COL7A1-206ENST00000466591 PSMB10P40306 273 aa14.58□□□□□ -0.08
COL7A1-206ENST00000466591 NAA10P41227 235 aaPredicted RBP14.58□□□□□ -0.08
COL7A1-206ENST00000466591 PAX2Q02962 417 aa14.58□□□□□ -0.08
COL7A1-206ENST00000466591 GK3PQ14409 553 aa14.58□□□□□ -0.08
COL7A1-206ENST00000466591 MICBQ29980 383 aa14.58□□□□□ -0.08
COL7A1-206ENST00000466591 KLHL12Q53G59 568 aa14.58□□□□□ -0.08
COL7A1-206ENST00000466591 TEX30Q5JUR7 227 aa14.58□□□□□ -0.08
COL7A1-206ENST00000466591 C9orf139Q6ZV77 190 aa14.58□□□□□ -0.08
COL7A1-206ENST00000466591 SLC16A9Q7RTY1 509 aa14.58□□□□□ -0.08
COL7A1-206ENST00000466591 IQCF1Q8N6M8 205 aa14.58□□□□□ -0.08
COL7A1-206ENST00000466591 LRRC29Q8WV35 223 aa14.58□□□□□ -0.08
COL7A1-206ENST00000466591 GATAD2BQ8WXI9 593 aa14.58□□□□□ -0.08
COL7A1-206ENST00000466591 CCT8L2Q96SF2 557 aa14.58□□□□□ -0.08
COL7A1-206ENST00000466591 DDOQ99489 341 aa14.58□□□□□ -0.08
COL7A1-206ENST00000466591 MICU1Q9BPX6 476 aa14.58□□□□□ -0.08
COL7A1-206ENST00000466591 CMC2Q9NRP2 79 aa14.58□□□□□ -0.08
COL7A1-206ENST00000466591 C22orf46C9J442 243 aa14.57□□□□□ -0.08
COL7A1-206ENST00000466591 TIPRLO75663 272 aa14.57□□□□□ -0.08
COL7A1-206ENST00000466591 EGR1P18146 543 aa14.57□□□□□ -0.08
COL7A1-206ENST00000466591 ZNF121P58317 390 aaPredicted RBP14.57□□□□□ -0.08
COL7A1-206ENST00000466591 HOXA4Q00056 320 aaPredicted RBP14.57□□□□□ -0.08
COL7A1-206ENST00000466591 DEFB112Q30KQ8 113 aa14.57□□□□□ -0.08
COL7A1-206ENST00000466591 C16orf87Q6PH81 154 aa14.57□□□□□ -0.08
COL7A1-206ENST00000466591 SLC36A1Q7Z2H8 476 aa14.57□□□□□ -0.08
COL7A1-206ENST00000466591 CSNK2A3Q8NEV1 391 aa14.57□□□□□ -0.08
COL7A1-206ENST00000466591 THEM6Q8WUY1 208 aa14.57□□□□□ -0.08
COL7A1-206ENST00000466591 ASB9Q96DX5 294 aa14.57□□□□□ -0.08
COL7A1-206ENST00000466591 FEVQ99581 238 aa14.57□□□□□ -0.08
COL7A1-206ENST00000466591 ABHD6Q9BV23 337 aa14.57□□□□□ -0.08
COL7A1-206ENST00000466591 RASSF4Q9H2L5 321 aa14.57□□□□□ -0.08
COL7A1-206ENST00000466591 VNN3Q9NY84 501 aa14.57□□□□□ -0.08
COL7A1-206ENST00000466591 SOX21Q9Y651 276 aaPredicted RBP14.57□□□□□ -0.08
COL7A1-206ENST00000466591 POM121CA8CG34 1229 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 GLCEO94923 617 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 ECDO95905 644 aaPredicted RBP14.56□□□□□ -0.08
COL7A1-206ENST00000466591 LYNP07948 512 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 SFTPBP07988 381 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 PSKH1P11801 424 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 OMGP23515 440 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 CFHR2P36980 270 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 GMFBP60983 142 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 IL5RAQ01344 420 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 POU4F2Q12837 409 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 PDCD1Q15116 288 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 ZNF362Q5T0B9 420 aaPredicted RBP14.56□□□□□ -0.08
COL7A1-206ENST00000466591 RUSC1-AS1Q66K80 236 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 PLBD1Q6P4A8 553 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 C17orf107Q6ZR85 190 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 COMMD2Q86X83 199 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 FAM81AQ8TBF8 368 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 LHX4Q969G2 390 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 TMIGD2Q96BF3 282 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 C1orf147Q96MC9 270 aaPredicted RBP14.56□□□□□ -0.08
COL7A1-206ENST00000466591 WDFY2Q96P53 400 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 HIST1H2AAQ96QV6 131 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 NIPSNAP1Q9BPW8 284 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 THTPAQ9BU02 230 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 RTL8AQ9BWD3 113 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 CHID1Q9BWS9 393 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 NMNAT2Q9BZQ4 307 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 RGCCQ9H4X1 137 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 YY1AP1Q9H869 796 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 NOX4Q9NPH5 578 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 PDP1Q9P0J1 537 aaPredicted RBP14.56□□□□□ -0.08
COL7A1-206ENST00000466591 ONECUT1Q9UBC0 465 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 CTSZQ9UBR2 303 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 DNAJB11Q9UBS4 358 aa14.56□□□□□ -0.08
COL7A1-206ENST00000466591 C5orf63A6NC05 138 aa14.55□□□□□ -0.08
COL7A1-206ENST00000466591 NKX6-3A6NJ46 265 aa14.55□□□□□ -0.08
COL7A1-206ENST00000466591 SRRM5B3KS81 715 aa14.55□□□□□ -0.08
COL7A1-206ENST00000466591 DVL1O14640 695 aa14.55□□□□□ -0.08
COL7A1-206ENST00000466591 PTBP3O95758 552 aaKnown RBP14.55□□□□□ -0.08
COL7A1-206ENST00000466591 HMGN1P05114 100 aa14.55□□□□□ -0.08
COL7A1-206ENST00000466591 GSK3AP49840 483 aa14.55□□□□□ -0.08
COL7A1-206ENST00000466591 ARF6P62330 175 aa14.55□□□□□ -0.08
COL7A1-206ENST00000466591 FAM3AP98173 230 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms