RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 FAM90A1Q86YD7 464 aa15.87■□□□□ 0.13
COL9A3-206ENST00000466532 SPSB4Q96A44 273 aa15.87■□□□□ 0.13
COL9A3-206ENST00000466532 VNN3Q9NY84 501 aa15.87■□□□□ 0.13
COL9A3-206ENST00000466532 MMP24Q9Y5R2 645 aa15.87■□□□□ 0.13
COL9A3-206ENST00000466532 U3KQV3 271 aa15.87■□□□□ 0.13
COL9A3-206ENST00000466532 CMYA5Q8N3K9 4069 aa15.86■□□□□ 0.13
COL9A3-206ENST00000466532 IGHV3OR15-7A0A075B7D8 119 aa15.86■□□□□ 0.13
COL9A3-206ENST00000466532 TCRBV5S2A0A599 114 aa15.86■□□□□ 0.13
COL9A3-206ENST00000466532 DVL1O14640 695 aa15.86■□□□□ 0.13
COL9A3-206ENST00000466532 LHBP01229 141 aa15.86■□□□□ 0.13
COL9A3-206ENST00000466532 IFNGP01579 166 aa15.86■□□□□ 0.13
COL9A3-206ENST00000466532 CRYBA1P05813 215 aa15.86■□□□□ 0.13
COL9A3-206ENST00000466532 MELTFP08582 738 aa15.86■□□□□ 0.13
COL9A3-206ENST00000466532 HSD11B1P28845 292 aa15.86■□□□□ 0.13
COL9A3-206ENST00000466532 BLVRAP53004 296 aa15.86■□□□□ 0.13
COL9A3-206ENST00000466532 GNGT1P63211 74 aa15.86■□□□□ 0.13
COL9A3-206ENST00000466532 FAM3AP98173 230 aa15.86■□□□□ 0.13
COL9A3-206ENST00000466532 POU4F2Q12837 409 aa15.86■□□□□ 0.13
COL9A3-206ENST00000466532 MICAQ29983 383 aa15.86■□□□□ 0.13
COL9A3-206ENST00000466532 SLC16A9Q7RTY1 509 aa15.86■□□□□ 0.13
COL9A3-206ENST00000466532 PIGWQ7Z7B1 504 aa15.86■□□□□ 0.13
COL9A3-206ENST00000466532 GATAD2BQ8WXI9 593 aa15.86■□□□□ 0.13
COL9A3-206ENST00000466532 FAM71F1Q96KD3 344 aaPredicted RBP15.86■□□□□ 0.13
COL9A3-206ENST00000466532 CHIAQ9BZP6 476 aa15.86■□□□□ 0.13
COL9A3-206ENST00000466532 SIRPDQ9H106 197 aa15.86■□□□□ 0.13
COL9A3-206ENST00000466532 MAGIXQ9H6Y5 334 aa15.86■□□□□ 0.13
COL9A3-206ENST00000466532 REEP1Q9H902 201 aa15.86■□□□□ 0.13
COL9A3-206ENST00000466532 SAMHD1Q9Y3Z3 626 aaKnown RBP15.86■□□□□ 0.13
COL9A3-206ENST00000466532 RIIAD1A6NNX1 92 aa15.85■□□□□ 0.13
COL9A3-206ENST00000466532 FCN3O75636 299 aa15.85■□□□□ 0.13
COL9A3-206ENST00000466532 ZNF3P17036 446 aa15.85■□□□□ 0.13
COL9A3-206ENST00000466532 GRK5P34947 590 aa15.85■□□□□ 0.13
COL9A3-206ENST00000466532 GYS2P54840 703 aa15.85■□□□□ 0.13
COL9A3-206ENST00000466532 RAG2P55895 527 aa15.85■□□□□ 0.13
COL9A3-206ENST00000466532 PDCD1Q15116 288 aa15.85■□□□□ 0.13
COL9A3-206ENST00000466532 LINC01590Q5TEZ4 76 aa15.85■□□□□ 0.13
COL9A3-206ENST00000466532 TEX36Q5VZQ5 186 aa15.85■□□□□ 0.13
COL9A3-206ENST00000466532 OR2T5Q6IEZ7 315 aa15.85■□□□□ 0.13
COL9A3-206ENST00000466532 BTN2A1Q7KYR7 527 aa15.85■□□□□ 0.13
COL9A3-206ENST00000466532 WDR86Q86TI4 376 aa15.85■□□□□ 0.13
COL9A3-206ENST00000466532 TMEM86BQ8N661 226 aa15.85■□□□□ 0.13
COL9A3-206ENST00000466532 OR6N2Q8NGY6 317 aa15.85■□□□□ 0.13
COL9A3-206ENST00000466532 OR2T29Q8NH02 315 aa15.85■□□□□ 0.13
COL9A3-206ENST00000466532 OR4F5Q8NH21 305 aa15.85■□□□□ 0.13
COL9A3-206ENST00000466532 LRRC29Q8WV35 223 aa15.85■□□□□ 0.13
COL9A3-206ENST00000466532 ST8SIA4Q92187 359 aa15.85■□□□□ 0.13
COL9A3-206ENST00000466532 LHX4Q969G2 390 aa15.85■□□□□ 0.13
COL9A3-206ENST00000466532 SGK3Q96BR1 496 aa15.85■□□□□ 0.13
COL9A3-206ENST00000466532 REEP6Q96HR9 211 aa15.85■□□□□ 0.13
COL9A3-206ENST00000466532 INTS14Q96SY0 518 aa15.85■□□□□ 0.13
COL9A3-206ENST00000466532 DGCR6LQ9BY27 220 aa15.85■□□□□ 0.13
COL9A3-206ENST00000466532 TOR3AQ9H497 397 aa15.85■□□□□ 0.13
COL9A3-206ENST00000466532 SP140LQ9H930 580 aa15.85■□□□□ 0.13
COL9A3-206ENST00000466532 ACOXLQ9NUZ1 547 aa15.85■□□□□ 0.13
COL9A3-206ENST00000466532 KAAG1Q9UBP8 84 aa15.85■□□□□ 0.13
COL9A3-206ENST00000466532 IGHV1-69DA0A0B4J2H0 117 aa15.84■□□□□ 0.13
COL9A3-206ENST00000466532 A0A1B0GUS0 222 aa15.84■□□□□ 0.13
COL9A3-206ENST00000466532 KNG1P01042 644 aa15.84■□□□□ 0.13
COL9A3-206ENST00000466532 IGHV1-69P01742 117 aa15.84■□□□□ 0.13
COL9A3-206ENST00000466532 MNAT1P51948 309 aa15.84■□□□□ 0.13
COL9A3-206ENST00000466532 ARF6P62330 175 aa15.84■□□□□ 0.13
COL9A3-206ENST00000466532 LCN8Q6JVE9 175 aa15.84■□□□□ 0.13
COL9A3-206ENST00000466532 FAM57BQ71RH2 274 aa15.84■□□□□ 0.13
COL9A3-206ENST00000466532 DPY19L4Q7Z388 723 aa15.84■□□□□ 0.13
COL9A3-206ENST00000466532 DHFR2Q86XF0 187 aa15.84■□□□□ 0.13
COL9A3-206ENST00000466532 ERI1Q8IV48 349 aaKnown RBP15.84■□□□□ 0.13
COL9A3-206ENST00000466532 C11orf53Q8IXP5 236 aa15.84■□□□□ 0.13
COL9A3-206ENST00000466532 KIR3DL3Q8N743 410 aa15.84■□□□□ 0.13
COL9A3-206ENST00000466532 OTULINQ96BN8 352 aa15.84■□□□□ 0.13
COL9A3-206ENST00000466532 ABHD6Q9BV23 337 aa15.84■□□□□ 0.13
COL9A3-206ENST00000466532 MUC13Q9H3R2 512 aa15.84■□□□□ 0.13
COL9A3-206ENST00000466532 MED20Q9H944 212 aa15.84■□□□□ 0.13
COL9A3-206ENST00000466532 RNPEPL1Q9HAU8 725 aa15.84■□□□□ 0.13
COL9A3-206ENST00000466532 BEX1Q9HBH7 125 aa15.84■□□□□ 0.13
COL9A3-206ENST00000466532 CMC2Q9NRP2 79 aa15.84■□□□□ 0.13
COL9A3-206ENST00000466532 DNAJC27Q9NZQ0 273 aa15.84■□□□□ 0.13
COL9A3-206ENST00000466532 POMT1Q9Y6A1 747 aa15.84■□□□□ 0.13
COL9A3-206ENST00000466532 hCG_38984A0A1B0GV85 526 aa15.83■□□□□ 0.12
COL9A3-206ENST00000466532 FAM183AA6NL82 134 aa15.83■□□□□ 0.12
COL9A3-206ENST00000466532 B2RBV5 119 aa15.83■□□□□ 0.12
COL9A3-206ENST00000466532 ECDO95905 644 aaPredicted RBP15.83■□□□□ 0.12
COL9A3-206ENST00000466532 APOC1P02654 83 aa15.83■□□□□ 0.12
COL9A3-206ENST00000466532 MICBQ29980 383 aa15.83■□□□□ 0.12
COL9A3-206ENST00000466532 GFOD2Q3B7J2 385 aa15.83■□□□□ 0.12
COL9A3-206ENST00000466532 C11orf91Q3C1V1 193 aa15.83■□□□□ 0.12
COL9A3-206ENST00000466532 FAM98BQ52LJ0 330 aaKnown RBP15.83■□□□□ 0.12
COL9A3-206ENST00000466532 C17orf107Q6ZR85 190 aa15.83■□□□□ 0.12
COL9A3-206ENST00000466532 OR1M1Q8NGA1 313 aa15.83■□□□□ 0.12
COL9A3-206ENST00000466532 OR10G2Q8NGC3 310 aa15.83■□□□□ 0.12
COL9A3-206ENST00000466532 TEX47Q8TBZ9 253 aa15.83■□□□□ 0.12
COL9A3-206ENST00000466532 RNF133Q8WVZ7 376 aa15.83■□□□□ 0.12
COL9A3-206ENST00000466532 BRD7Q9NPI1 651 aa15.83■□□□□ 0.12
COL9A3-206ENST00000466532 C1RLQ9NZP8 487 aa15.83■□□□□ 0.12
COL9A3-206ENST00000466532 RPUSD1Q9UJJ7 312 aaKnown RBP15.83■□□□□ 0.12
COL9A3-206ENST00000466532 TIPRLO75663 272 aa15.82■□□□□ 0.12
COL9A3-206ENST00000466532 MUC1P15941 1255 aaPredicted RBP15.82■□□□□ 0.12
COL9A3-206ENST00000466532 CFL1P23528 166 aaKnown RBP15.82■□□□□ 0.12
COL9A3-206ENST00000466532 GSTT1P30711 240 aa15.82■□□□□ 0.12
COL9A3-206ENST00000466532 ZNF121P58317 390 aaPredicted RBP15.82■□□□□ 0.12
COL9A3-206ENST00000466532 CSNK2BP67870 215 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms