RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 DUX4L6P0CJ89 424 aa14.17□□□□□ -0.14
HMGN1-210ENST00000464078 DUX4L7P0CJ90 424 aa14.17□□□□□ -0.14
HMGN1-210ENST00000464078 ZNF823P16415 610 aa14.17□□□□□ -0.14
HMGN1-210ENST00000464078 NOS3P29474 1203 aa14.17□□□□□ -0.14
HMGN1-210ENST00000464078 HERPUD1Q15011 391 aa14.17□□□□□ -0.14
HMGN1-210ENST00000464078 C11orf88Q6PI97 169 aa14.17□□□□□ -0.14
HMGN1-210ENST00000464078 DUX4L9Q6RFH8 374 aaPredicted RBP14.17□□□□□ -0.14
HMGN1-210ENST00000464078 WDR82Q6UXN9 313 aa14.17□□□□□ -0.14
HMGN1-210ENST00000464078 REC114Q7Z4M0 266 aa14.17□□□□□ -0.14
HMGN1-210ENST00000464078 WDR86Q86TI4 376 aa14.17□□□□□ -0.14
HMGN1-210ENST00000464078 C11orf53Q8IXP5 236 aa14.17□□□□□ -0.14
HMGN1-210ENST00000464078 FAM216BQ8N7L0 139 aa14.17□□□□□ -0.14
HMGN1-210ENST00000464078 SDR9C7Q8NEX9 313 aa14.17□□□□□ -0.14
HMGN1-210ENST00000464078 OR52J3Q8NH60 311 aa14.17□□□□□ -0.14
HMGN1-210ENST00000464078 LRRC29Q8WV35 223 aa14.17□□□□□ -0.14
HMGN1-210ENST00000464078 CCL13Q99616 98 aa14.17□□□□□ -0.14
HMGN1-210ENST00000464078 KCTD14Q9BQ13 255 aaPredicted RBP14.17□□□□□ -0.14
HMGN1-210ENST00000464078 SIRT7Q9NRC8 400 aa14.17□□□□□ -0.14
HMGN1-210ENST00000464078 ABCD2Q9UBJ2 740 aa14.17□□□□□ -0.14
HMGN1-210ENST00000464078 DUX4Q9UBX2 424 aa14.17□□□□□ -0.14
HMGN1-210ENST00000464078 TIPRLO75663 272 aa14.16□□□□□ -0.14
HMGN1-210ENST00000464078 NCK1P16333 377 aa14.16□□□□□ -0.14
HMGN1-210ENST00000464078 GABRA5P31644 462 aa14.16□□□□□ -0.14
HMGN1-210ENST00000464078 SAA4P35542 130 aa14.16□□□□□ -0.14
HMGN1-210ENST00000464078 SMIM11AP58511 58 aa14.16□□□□□ -0.14
HMGN1-210ENST00000464078 POU4F2Q12837 409 aa14.16□□□□□ -0.14
HMGN1-210ENST00000464078 SLC35E4Q6ICL7 350 aa14.16□□□□□ -0.14
HMGN1-210ENST00000464078 HACD2Q6Y1H2 254 aa14.16□□□□□ -0.14
HMGN1-210ENST00000464078 Q6ZPA2 131 aa14.16□□□□□ -0.14
HMGN1-210ENST00000464078 C1orf122Q6ZSJ8 110 aa14.16□□□□□ -0.14
HMGN1-210ENST00000464078 Q6ZTK2 550 aa14.16□□□□□ -0.14
HMGN1-210ENST00000464078 ZDHHC21Q8IVQ6 265 aa14.16□□□□□ -0.14
HMGN1-210ENST00000464078 FAM86B1Q8N7N1 296 aa14.16□□□□□ -0.14
HMGN1-210ENST00000464078 Q8N7P7 452 aa14.16□□□□□ -0.14
HMGN1-210ENST00000464078 CFHR4Q92496 578 aa14.16□□□□□ -0.14
HMGN1-210ENST00000464078 TNFRSF14Q92956 283 aa14.16□□□□□ -0.14
HMGN1-210ENST00000464078 DCTN5Q9BTE1 182 aa14.16□□□□□ -0.14
HMGN1-210ENST00000464078 DNTTIP1Q9H147 329 aa14.16□□□□□ -0.14
HMGN1-210ENST00000464078 TLNRD1Q9H1K6 362 aa14.16□□□□□ -0.14
HMGN1-210ENST00000464078 VIPAS39Q9H9C1 493 aa14.16□□□□□ -0.14
HMGN1-210ENST00000464078 DCAF13Q9NV06 445 aaKnown RBP14.16□□□□□ -0.14
HMGN1-210ENST00000464078 SAMD4AQ9UPU9 718 aaKnown RBP14.16□□□□□ -0.14
HMGN1-210ENST00000464078 COMMD3-BMI1R4GMX3 469 aa14.16□□□□□ -0.14
HMGN1-210ENST00000464078 ANKRD30BLA7E2S9 258 aa14.15□□□□□ -0.14
HMGN1-210ENST00000464078 DIRAS1O95057 198 aa14.15□□□□□ -0.14
HMGN1-210ENST00000464078 ALX3O95076 343 aa14.15□□□□□ -0.14
HMGN1-210ENST00000464078 PAHP00439 452 aa14.15□□□□□ -0.14
HMGN1-210ENST00000464078 PSKH1P11801 424 aa14.15□□□□□ -0.14
HMGN1-210ENST00000464078 COX4I1P13073 169 aa14.15□□□□□ -0.14
HMGN1-210ENST00000464078 RPS27P42677 84 aaKnown RBP14.15□□□□□ -0.14
HMGN1-210ENST00000464078 TGM4P49221 684 aa14.15□□□□□ -0.14
HMGN1-210ENST00000464078 EFNB2P52799 333 aa14.15□□□□□ -0.14
HMGN1-210ENST00000464078 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.15□□□□□ -0.14
HMGN1-210ENST00000464078 ACSM1Q08AH1 577 aa14.15□□□□□ -0.14
HMGN1-210ENST00000464078 KRT72Q14CN4 511 aa14.15□□□□□ -0.14
HMGN1-210ENST00000464078 ATPAF1Q5TC12 328 aaPredicted RBP14.15□□□□□ -0.14
HMGN1-210ENST00000464078 STUMQ69YW2 141 aa14.15□□□□□ -0.14
HMGN1-210ENST00000464078 OR1M1Q8NGA1 313 aa14.15□□□□□ -0.14
HMGN1-210ENST00000464078 OR8S1Q8NH09 359 aa14.15□□□□□ -0.14
HMGN1-210ENST00000464078 DDOQ99489 341 aa14.15□□□□□ -0.14
HMGN1-210ENST00000464078 KCNJ15Q99712 375 aa14.15□□□□□ -0.14
HMGN1-210ENST00000464078 COPS4Q9BT78 406 aa14.15□□□□□ -0.14
HMGN1-210ENST00000464078 ADA2Q9NZK5 511 aa14.15□□□□□ -0.14
HMGN1-210ENST00000464078 CD300AQ9UGN4 299 aa14.15□□□□□ -0.14
HMGN1-210ENST00000464078 ANKRD61A6NGH8 418 aa14.14□□□□□ -0.15
HMGN1-210ENST00000464078 ACOT8O14734 319 aa14.14□□□□□ -0.15
HMGN1-210ENST00000464078 PIN1P1O15428 100 aa14.14□□□□□ -0.15
HMGN1-210ENST00000464078 NDUFB3O43676 98 aa14.14□□□□□ -0.15
HMGN1-210ENST00000464078 SEMG1P04279 462 aa14.14□□□□□ -0.15
HMGN1-210ENST00000464078 NAA10P41227 235 aaPredicted RBP14.14□□□□□ -0.15
HMGN1-210ENST00000464078 GSSP48637 474 aa14.14□□□□□ -0.15
HMGN1-210ENST00000464078 UBE2E1P51965 193 aa14.14□□□□□ -0.15
HMGN1-210ENST00000464078 CSNK2BP67870 215 aa14.14□□□□□ -0.15
HMGN1-210ENST00000464078 ELF3P78545 371 aaPredicted RBP14.14□□□□□ -0.15
HMGN1-210ENST00000464078 LRRC10Q5BKY1 277 aa14.14□□□□□ -0.15
HMGN1-210ENST00000464078 NCR3LG1Q68D85 454 aa14.14□□□□□ -0.15
HMGN1-210ENST00000464078 DPY19L4Q7Z388 723 aa14.14□□□□□ -0.15
HMGN1-210ENST00000464078 DCXRQ7Z4W1 244 aa14.14□□□□□ -0.15
HMGN1-210ENST00000464078 LNX2Q8N448 690 aa14.14□□□□□ -0.15
HMGN1-210ENST00000464078 BEND2Q8NDZ0 799 aa14.14□□□□□ -0.15
HMGN1-210ENST00000464078 PROKR2Q8NFJ6 384 aa14.14□□□□□ -0.15
HMGN1-210ENST00000464078 OR2T4Q8NH00 348 aa14.14□□□□□ -0.15
HMGN1-210ENST00000464078 PPA2Q9H2U2 334 aa14.14□□□□□ -0.15
HMGN1-210ENST00000464078 EFCAB1Q9HAE3 211 aa14.14□□□□□ -0.15
HMGN1-210ENST00000464078 MEIOCA2RUB1 952 aa14.13□□□□□ -0.15
HMGN1-210ENST00000464078 ZNF878C9JN71 531 aa14.13□□□□□ -0.15
HMGN1-210ENST00000464078 M0R1W7 72 aa14.13□□□□□ -0.15
HMGN1-210ENST00000464078 GADD45GO95257 159 aa14.13□□□□□ -0.15
HMGN1-210ENST00000464078 SLC2A1P11166 492 aa14.13□□□□□ -0.15
HMGN1-210ENST00000464078 AMY2BP19961 511 aa14.13□□□□□ -0.15
HMGN1-210ENST00000464078 PYCR1P32322 319 aa14.13□□□□□ -0.15
HMGN1-210ENST00000464078 IFNGR2P38484 337 aa14.13□□□□□ -0.15
HMGN1-210ENST00000464078 PRKXP51817 358 aa14.13□□□□□ -0.15
HMGN1-210ENST00000464078 FAM3AP98173 230 aa14.13□□□□□ -0.15
HMGN1-210ENST00000464078 KLRD1Q13241 179 aa14.13□□□□□ -0.15
HMGN1-210ENST00000464078 SLC16A9Q7RTY1 509 aa14.13□□□□□ -0.15
HMGN1-210ENST00000464078 HDXQ7Z353 690 aa14.13□□□□□ -0.15
HMGN1-210ENST00000464078 PPP1R14AQ96A00 147 aa14.13□□□□□ -0.15
HMGN1-210ENST00000464078 SLAMF6Q96DU3 332 aa14.13□□□□□ -0.15
HMGN1-210ENST00000464078 NSRP1Q9H0G5 558 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms