RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 WIPI2Q9Y4P8 454 aa14.92□□□□□ -0.02
VPS52-214ENST00000463486 IGHV3-64DA0A0J9YX35 117 aa14.91□□□□□ -0.02
VPS52-214ENST00000463486 A0A0U1RQV5 110 aa14.91□□□□□ -0.02
VPS52-214ENST00000463486 LOC100289279A0A1B0GTE1 492 aa14.91□□□□□ -0.02
VPS52-214ENST00000463486 GMDSO60547 372 aa14.91□□□□□ -0.02
VPS52-214ENST00000463486 CHN2P52757 468 aa14.91□□□□□ -0.02
VPS52-214ENST00000463486 RIDAP52758 137 aaKnown RBP14.91□□□□□ -0.02
VPS52-214ENST00000463486 MVKQ03426 396 aa14.91□□□□□ -0.02
VPS52-214ENST00000463486 C6orf52Q5T4I8 152 aa14.91□□□□□ -0.02
VPS52-214ENST00000463486 PLEKHG7Q6ZR37 379 aa14.91□□□□□ -0.02
VPS52-214ENST00000463486 CELF2-AS1Q8N7Q2 184 aa14.91□□□□□ -0.02
VPS52-214ENST00000463486 OR10H4Q8NGA5 316 aa14.91□□□□□ -0.02
VPS52-214ENST00000463486 LGALS12Q96DT0 336 aa14.91□□□□□ -0.02
VPS52-214ENST00000463486 RNFT2Q96EX2 444 aa14.91□□□□□ -0.02
VPS52-214ENST00000463486 ZNF649Q9BS31 505 aa14.91□□□□□ -0.02
VPS52-214ENST00000463486 PBOV1Q9GZY1 135 aa14.91□□□□□ -0.02
VPS52-214ENST00000463486 SLC22A4Q9H015 551 aa14.91□□□□□ -0.02
VPS52-214ENST00000463486 IKZF2Q9UKS7 526 aa14.91□□□□□ -0.02
VPS52-214ENST00000463486 CLDN25C9JDP6 229 aa14.9□□□□□ -0.02
VPS52-214ENST00000463486 MPZL2O60487 215 aa14.9□□□□□ -0.02
VPS52-214ENST00000463486 CLIC3O95833 236 aa14.9□□□□□ -0.02
VPS52-214ENST00000463486 TTRP02766 147 aa14.9□□□□□ -0.02
VPS52-214ENST00000463486 HOXB4P17483 251 aaPredicted RBP14.9□□□□□ -0.02
VPS52-214ENST00000463486 CFL1P23528 166 aaKnown RBP14.9□□□□□ -0.02
VPS52-214ENST00000463486 SRP9P49458 86 aaKnown RBP14.9□□□□□ -0.02
VPS52-214ENST00000463486 ZNF91Q05481 1191 aa14.9□□□□□ -0.02
VPS52-214ENST00000463486 GFOD2Q3B7J2 385 aa14.9□□□□□ -0.02
VPS52-214ENST00000463486 ZNF691Q5VV52 312 aa14.9□□□□□ -0.02
VPS52-214ENST00000463486 CYB5R2Q6BCY4 276 aa14.9□□□□□ -0.02
VPS52-214ENST00000463486 KLBQ86Z14 1044 aa14.9□□□□□ -0.02
VPS52-214ENST00000463486 ZNF420Q8TAQ5 688 aaPredicted RBP14.9□□□□□ -0.02
VPS52-214ENST00000463486 NRG4Q8WWG1 115 aa14.9□□□□□ -0.02
VPS52-214ENST00000463486 DVL3Q92997 716 aaPredicted RBP14.9□□□□□ -0.02
VPS52-214ENST00000463486 MRPS18AQ9NVS2 196 aaKnown RBP14.9□□□□□ -0.02
VPS52-214ENST00000463486 ZNF391Q9UJN7 358 aa14.9□□□□□ -0.02
VPS52-214ENST00000463486 RHBDD3Q9Y3P4 386 aa14.9□□□□□ -0.02
VPS52-214ENST00000463486 R4GMQ9 66 aa14.9□□□□□ -0.02
VPS52-214ENST00000463486 A0A1B0GTI1 187 aa14.89□□□□□ -0.03
VPS52-214ENST00000463486 METTL15A6NJ78 407 aa14.89□□□□□ -0.03
VPS52-214ENST00000463486 INAFM1C9JVW0 142 aa14.89□□□□□ -0.03
VPS52-214ENST00000463486 TMEM178BH3BS89 294 aa14.89□□□□□ -0.03
VPS52-214ENST00000463486 SULT1C4O75897 302 aa14.89□□□□□ -0.03
VPS52-214ENST00000463486 IGHV2-70P01814 119 aa14.89□□□□□ -0.03
VPS52-214ENST00000463486 DBTP11182 482 aaKnown RBP14.89□□□□□ -0.03
VPS52-214ENST00000463486 GZMKP49863 264 aa14.89□□□□□ -0.03
VPS52-214ENST00000463486 OR8G1Q15617 311 aa14.89□□□□□ -0.03
VPS52-214ENST00000463486 MPPED2Q15777 294 aa14.89□□□□□ -0.03
VPS52-214ENST00000463486 ZNF181Q2M3W8 571 aa14.89□□□□□ -0.03
VPS52-214ENST00000463486 LIPNQ5VXI9 398 aa14.89□□□□□ -0.03
VPS52-214ENST00000463486 Q6ZSR3 168 aa14.89□□□□□ -0.03
VPS52-214ENST00000463486 WDR86Q86TI4 376 aa14.89□□□□□ -0.03
VPS52-214ENST00000463486 MOGAT3Q86VF5 341 aa14.89□□□□□ -0.03
VPS52-214ENST00000463486 ELMOD2Q8IZ81 293 aa14.89□□□□□ -0.03
VPS52-214ENST00000463486 PLPP7Q8NBV4 271 aa14.89□□□□□ -0.03
VPS52-214ENST00000463486 Q8TCH9 128 aa14.89□□□□□ -0.03
VPS52-214ENST00000463486 RORBQ92753 470 aa14.89□□□□□ -0.03
VPS52-214ENST00000463486 ADAT1Q9BUB4 502 aaKnown RBP14.89□□□□□ -0.03
VPS52-214ENST00000463486 NARFLQ9H6Q4 476 aa14.89□□□□□ -0.03
VPS52-214ENST00000463486 AMBNQ9NP70 447 aa14.89□□□□□ -0.03
VPS52-214ENST00000463486 NPTNQ9Y639 398 aa14.89□□□□□ -0.03
VPS52-214ENST00000463486 FAM157AC9JC47 383 aa14.88□□□□□ -0.03
VPS52-214ENST00000463486 CST4P01036 141 aa14.88□□□□□ -0.03
VPS52-214ENST00000463486 ATP6V1E1P36543 226 aa14.88□□□□□ -0.03
VPS52-214ENST00000463486 SLC34A1Q06495 639 aa14.88□□□□□ -0.03
VPS52-214ENST00000463486 SLC3A1Q07837 685 aa14.88□□□□□ -0.03
VPS52-214ENST00000463486 ZMYND11Q15326 602 aa14.88□□□□□ -0.03
VPS52-214ENST00000463486 SMN1Q16637 294 aaKnown RBP14.88□□□□□ -0.03
VPS52-214ENST00000463486 ZNF829Q3KNS6 432 aaPredicted RBP14.88□□□□□ -0.03
VPS52-214ENST00000463486 PRAMEF6Q5VXH4 476 aa14.88□□□□□ -0.03
VPS52-214ENST00000463486 LRRC28Q86X40 367 aaPredicted RBP14.88□□□□□ -0.03
VPS52-214ENST00000463486 C11orf53Q8IXP5 236 aa14.88□□□□□ -0.03
VPS52-214ENST00000463486 CSNK2A3Q8NEV1 391 aa14.88□□□□□ -0.03
VPS52-214ENST00000463486 OR51E1Q8TCB6 317 aa14.88□□□□□ -0.03
VPS52-214ENST00000463486 RAB1CQ92928 201 aa14.88□□□□□ -0.03
VPS52-214ENST00000463486 Q96MT0 163 aa14.88□□□□□ -0.03
VPS52-214ENST00000463486 FGF23Q9GZV9 251 aaPredicted RBP14.88□□□□□ -0.03
VPS52-214ENST00000463486 GPR84Q9NQS5 396 aa14.88□□□□□ -0.03
VPS52-214ENST00000463486 OR52A1Q9UKL2 312 aa14.88□□□□□ -0.03
VPS52-214ENST00000463486 MYRFQ9Y2G1 1151 aa14.88□□□□□ -0.03
VPS52-214ENST00000463486 IGHA1P01876 353 aa14.87□□□□□ -0.03
VPS52-214ENST00000463486 KRT8P05787 483 aa14.87□□□□□ -0.03
VPS52-214ENST00000463486 ZNF16P17020 682 aaPredicted RBP14.87□□□□□ -0.03
VPS52-214ENST00000463486 CDH15P55291 814 aa14.87□□□□□ -0.03
VPS52-214ENST00000463486 CDONQ4KMG0 1287 aa14.87□□□□□ -0.03
VPS52-214ENST00000463486 TTC23Q5W5X9 447 aa14.87□□□□□ -0.03
VPS52-214ENST00000463486 LAIR2Q6ISS4 152 aa14.87□□□□□ -0.03
VPS52-214ENST00000463486 CATSPERDQ86XM0 798 aa14.87□□□□□ -0.03
VPS52-214ENST00000463486 SPERTQ8NA61 448 aa14.87□□□□□ -0.03
VPS52-214ENST00000463486 ZNF555Q8NEP9 628 aa14.87□□□□□ -0.03
VPS52-214ENST00000463486 ERGIC1Q969X5 290 aa14.87□□□□□ -0.03
VPS52-214ENST00000463486 ITPKCQ96DU7 683 aa14.87□□□□□ -0.03
VPS52-214ENST00000463486 TIMD4Q96H15 378 aa14.87□□□□□ -0.03
VPS52-214ENST00000463486 RNPEPL1Q9HAU8 725 aa14.87□□□□□ -0.03
VPS52-214ENST00000463486 YAE1D1Q9NRH1 226 aa14.87□□□□□ -0.03
VPS52-214ENST00000463486 SLC22A13Q9Y226 551 aa14.87□□□□□ -0.03
VPS52-214ENST00000463486 NOP16Q9Y3C1 178 aaKnown RBP14.87□□□□□ -0.03
VPS52-214ENST00000463486 SNX5Q9Y5X3 404 aa14.87□□□□□ -0.03
VPS52-214ENST00000463486 CUBNO60494 3623 aa14.86□□□□□ -0.03
VPS52-214ENST00000463486 SNTNA6NMZ2 147 aa14.86□□□□□ -0.03
VPS52-214ENST00000463486 ANKRD30BLA7E2S9 258 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms