RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, human

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-223	ENST00000463004	CTDSPL	O15194	276 aa		10.45	□□□□□ -0.74
RBM39-223	ENST00000463004	KLF4	O43474	513 aa		10.45	□□□□□ -0.74
RBM39-223	ENST00000463004	TSPAN9	O75954	239 aa		10.45	□□□□□ -0.74
RBM39-223	ENST00000463004	RAB31	Q13636	194 aa		10.45	□□□□□ -0.74
RBM39-223	ENST00000463004	ZNF574	Q6ZN55	896 aa	Predicted RBP	10.45	□□□□□ -0.74
RBM39-223	ENST00000463004	STX12	Q86Y82	276 aa		10.45	□□□□□ -0.74
RBM39-223	ENST00000463004	LGI3	Q8N145	548 aa		10.45	□□□□□ -0.74
RBM39-223	ENST00000463004	OR13C5	Q8NGS8	318 aa		10.45	□□□□□ -0.74
RBM39-223	ENST00000463004	IMMP1L	Q96LU5	166 aa		10.45	□□□□□ -0.74
RBM39-223	ENST00000463004	C20orf85	Q9H1P6	137 aa		10.45	□□□□□ -0.74
RBM39-223	ENST00000463004	TMEM38B	Q9NVV0	291 aa		10.45	□□□□□ -0.74
RBM39-223	ENST00000463004	UBE2M	P61081	183 aa	Known RBP	10.45	□□□□□ -0.74
RBM39-223	ENST00000463004	SMIM21	Q3B7S5	101 aa		10.45	□□□□□ -0.74
RBM39-223	ENST00000463004	SLC25A53	Q5H9E4	307 aa		10.45	□□□□□ -0.74
RBM39-223	ENST00000463004	OR1S1	Q8NH92	325 aa		10.45	□□□□□ -0.74
RBM39-223	ENST00000463004	GPR35	Q9HC97	309 aa		10.45	□□□□□ -0.74
RBM39-223	ENST00000463004	TOR1A	O14656	332 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	MAGEB4	O15481	346 aa	Predicted RBP	10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	WDR1	O75083	606 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	MED6	O75586	246 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	IFNA1	P01562	189 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	MGMT	P16455	207 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	TNFRSF1A	P19438	455 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	MAGEA5	P43359	124 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	POU4F3	Q15319	338 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	FJX1	Q86VR8	437 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	HAS2	Q92819	552 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	TAS2R5	Q9NYW4	299 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	ING1	Q9UK53	422 aa	Predicted RBP	10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	CNTRL	Q7Z7A1	2325 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	IGLV3-32	A0A0A0MS00	114 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	TRGV8	A0A0C4DH27	118 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	MEIS3P1	A6NDR6	274 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	RER1	O15258	196 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	EIF4E	P06730	217 aa	Known RBP	10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	RPS4X	P62701	263 aa	Known RBP	10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	CCDC71	Q8IV32	467 aa	Predicted RBP	10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	IQCF2	Q8IXL9	164 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	NFAM1	Q8NET5	270 aa	Predicted RBP	10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	SLC30A7	Q8NEW0	376 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	PTX4	Q96A99	478 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	CCDC120	Q96HB5	630 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	ZNF426	Q9BUY5	554 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	MFF	Q9GZY8	342 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	ATPIF1	Q9UII2	106 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	BRWD1	Q9NSI6	2320 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	ATXN7L3	Q14CW9	347 aa	Predicted RBP	10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	OR1J1	Q8NGS3	322 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	OR13G1	Q8NGZ3	307 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	C22orf15	Q8WYQ4	148 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	PRELID3B	Q9Y3B1	194 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	NIN	Q8N4C6	2090 aa		10.44	□□□□□ -0.74
RBM39-223	ENST00000463004	PLXNA4	Q9HCM2	1894 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004		A0A0J9YW62	118 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	ZNF724	A8MTY0	619 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	OR10A3	P58181	314 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	LRRC37A5P	Q49AS3	106 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	FBXW9	Q5XUX1	488 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	TRAT1	Q6PIZ9	186 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	VHLL	Q6RSH7	139 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	SEH1L	Q96EE3	360 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	GNG12	Q9UBI6	72 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	RBMX2	Q9Y388	322 aa	Known RBP	10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	ATP23	Q9Y6H3	246 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	CSF3	P09919	207 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	FUT3	P21217	361 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	ZBTB37	Q5TC79	503 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	GDPD3	Q7L5L3	318 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	SPAG16	Q8N0X2	631 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	ZNF486	Q96H40	463 aa	Predicted RBP	10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	CITED4	Q96RK1	184 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	ZNF224	Q9NZL3	707 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004		A0A1B0GUH1	482 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	CRH	P06850	196 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	ACSM4	P0C7M7	580 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	PRKACA	P17612	351 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	GK2	Q14410	553 aa	Predicted RBP	10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	P2RY6	Q15077	328 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	TMEM108	Q6UXF1	575 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	PDZD9	Q8IXQ8	264 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	IL1F10	Q8WWZ1	152 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	KCNK17	Q96T54	332 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004		A8MV72	311 aa	Predicted RBP	10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	C1QC	P02747	245 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	IL5	P05113	134 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	HEXA	P06865	529 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	CTSB	P07858	339 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	MDH2	P40926	338 aa	Known RBP	10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	UTS2B	Q765I0	119 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	TMEM251	Q8N6I4	163 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	ZNF610	Q8N9Z0	462 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	AUNIP	Q9H7T9	357 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	PLEKHF2	Q9H8W4	249 aa		10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	UNKL	Q9H9P5	680 aa	Known RBP	10.43	□□□□□ -0.74
RBM39-223	ENST00000463004	TPT1	P13693	172 aa	Known RBP	10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	FAH	P16930	419 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	CLDN20	P56880	219 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	CFAP77	Q6ZQR2	320 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	GALNT11	Q8NCW6	608 aa		10.42	□□□□□ -0.74
RBM39-223	ENST00000463004	ELMOD3	Q96FG2	381 aa		10.42	□□□□□ -0.74

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