RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 RNLSQ5VYX0 342 aa10.04□□□□□ -0.8
CPNE1-221ENST00000462352 OR52N1Q8NH53 320 aa10.04□□□□□ -0.8
CPNE1-221ENST00000462352 HAVCR2Q8TDQ0 301 aa10.04□□□□□ -0.8
CPNE1-221ENST00000462352 FAM71F1Q96KD3 344 aaPredicted RBP10.04□□□□□ -0.8
CPNE1-221ENST00000462352 FOXC2Q99958 501 aa10.04□□□□□ -0.8
CPNE1-221ENST00000462352 SLC30A2Q9BRI3 323 aa10.04□□□□□ -0.8
CPNE1-221ENST00000462352 CDCA4Q9BXL8 241 aa10.04□□□□□ -0.8
CPNE1-221ENST00000462352 BARX1Q9HBU1 254 aaPredicted RBP10.04□□□□□ -0.8
CPNE1-221ENST00000462352 BABAM2Q9NXR7 383 aa10.04□□□□□ -0.8
CPNE1-221ENST00000462352 NKIRAS2Q9NYR9 191 aa10.04□□□□□ -0.8
CPNE1-221ENST00000462352 MRPL15Q9P015 296 aaKnown RBP10.04□□□□□ -0.8
CPNE1-221ENST00000462352 FRRS1LQ9P0K9 344 aa10.04□□□□□ -0.8
CPNE1-221ENST00000462352 ITGB1BP2Q9UKP3 347 aa10.04□□□□□ -0.8
CPNE1-221ENST00000462352 BLOC1S6Q9UL45 172 aa10.04□□□□□ -0.8
CPNE1-221ENST00000462352 ZDHHC8Q9ULC8 765 aa10.04□□□□□ -0.8
CPNE1-221ENST00000462352 ARID1AO14497 2285 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 A0A1B0GTI1 187 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 A0A1B0GWJ7 208 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 H0YL77 283 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 MLNRO43193 412 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 RGS10O43665 173 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 NCR1O76036 304 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 LY6HO94772 140 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 LALBAP00709 142 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 F12P00748 615 aaPredicted RBP10.03□□□□□ -0.8
CPNE1-221ENST00000462352 HPXP02790 462 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 MT-ND2P03891 347 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 ATP6V1B1P15313 513 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 CCL1P22362 96 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 CA6P23280 308 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 TGM4P49221 684 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 GTF2A1P52655 376 aaPredicted RBP10.03□□□□□ -0.8
CPNE1-221ENST00000462352 CCL8P80075 99 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 TSTQ16762 297 aaKnown RBP10.03□□□□□ -0.8
CPNE1-221ENST00000462352 PCGF3Q3KNV8 242 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 FAM209AQ5JX71 171 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 XAF1Q6GPH4 301 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 KLBQ86Z14 1044 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 NANOGP1Q8N7R0 232 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 PLPP7Q8NBV4 271 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 ZNF485Q8NCK3 441 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 CSNK2A3Q8NEV1 391 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 OR2Z1Q8NG97 314 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 OR10AD1Q8NGE0 317 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 OR13G1Q8NGZ3 307 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 NEU4Q8WWR8 484 aaPredicted RBP10.03□□□□□ -0.8
CPNE1-221ENST00000462352 GATAD2BQ8WXI9 593 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 ELMOD3Q96FG2 381 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 DIRC2Q96SL1 478 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 CXXC4Q9H2H0 198 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 TMEM100Q9NV29 134 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 ERGIC3Q9Y282 383 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 LRRC42Q9Y546 428 aa10.03□□□□□ -0.8
CPNE1-221ENST00000462352 A0A1B0GVI7 797 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 LOC107986453A0A1B0GWG9 222 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 LOC390937A0A1W2PQ73 354 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 OR4C45A6NMZ5 311 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 ANKRD30BLA7E2S9 258 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 H3BSH0 61 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 SSX4O60224 188 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 MTRF1O75570 445 aaKnown RBP10.02□□□□□ -0.81
CPNE1-221ENST00000462352 DHRS3O75911 302 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 HLA-DPB1P04440 258 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 CD55P08174 381 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 UBCP0CG48 685 aaKnown RBP10.02□□□□□ -0.81
CPNE1-221ENST00000462352 EEF1B2P24534 225 aaKnown RBP10.02□□□□□ -0.81
CPNE1-221ENST00000462352 MAP2K3P46734 347 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 WNT4P56705 351 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 TNFAIP6P98066 277 aaPredicted RBP10.02□□□□□ -0.81
CPNE1-221ENST00000462352 DOC2BQ14184 412 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 IRF3Q14653 427 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 CCDC58Q4VC31 144 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 Q5PR19 223 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 RPL22L1Q6P5R6 122 aaKnown RBP10.02□□□□□ -0.81
CPNE1-221ENST00000462352 Q6ZSR3 168 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 DOK3Q7L591 496 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 PRSS48Q7RTY5 328 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 KRTAP1-3Q8IUG1 177 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 RDH10Q8IZV5 341 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 SEMA6DQ8NFY4 1073 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 OR14K1Q8NGZ2 314 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 DVL3Q92997 716 aaPredicted RBP10.02□□□□□ -0.81
CPNE1-221ENST00000462352 ITFG2Q969R8 447 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 YTHDF1Q9BYJ9 559 aaKnown RBP10.02□□□□□ -0.81
CPNE1-221ENST00000462352 CCDC90BQ9GZT6 254 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 SLC22A4Q9H015 551 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 SAP30LQ9HAJ7 183 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 TRIM36Q9NQ86 728 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 DECR2Q9NUI1 292 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 PIGLQ9Y2B2 252 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 RHBDD3Q9Y3P4 386 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 V9GYS6 101 aa10.02□□□□□ -0.81
CPNE1-221ENST00000462352 MYO9AB2RTY4 2548 aa10.01□□□□□ -0.81
CPNE1-221ENST00000462352 TRBV2A0A0J9YWF9 115 aa10.01□□□□□ -0.81
CPNE1-221ENST00000462352 ZNF816-ZNF321PA0A0X1KG74 233 aa10.01□□□□□ -0.81
CPNE1-221ENST00000462352 F5H5P2 479 aa10.01□□□□□ -0.81
CPNE1-221ENST00000462352 TPD52L2O43399 206 aaKnown RBP10.01□□□□□ -0.81
CPNE1-221ENST00000462352 SYT7O43581 403 aa10.01□□□□□ -0.81
CPNE1-221ENST00000462352 GMDSO60547 372 aa10.01□□□□□ -0.81
CPNE1-221ENST00000462352 ZFPL1O95159 310 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms