RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 FAM3AP98173 230 aa11.77□□□□□ -0.53
CHRD-209ENST00000461120 MRPL28Q13084 256 aaKnown RBP11.77□□□□□ -0.53
CHRD-209ENST00000461120 IRF3Q14653 427 aa11.77□□□□□ -0.53
CHRD-209ENST00000461120 WDR38Q5JTN6 314 aa11.77□□□□□ -0.53
CHRD-209ENST00000461120 PRSS35Q8N3Z0 413 aa11.77□□□□□ -0.53
CHRD-209ENST00000461120 ZNF485Q8NCK3 441 aa11.77□□□□□ -0.53
CHRD-209ENST00000461120 OR2G2Q8NGZ5 317 aa11.77□□□□□ -0.53
CHRD-209ENST00000461120 OR51E1Q8TCB6 317 aa11.77□□□□□ -0.53
CHRD-209ENST00000461120 GTF3AQ92664 365 aaKnown RBP11.77□□□□□ -0.53
CHRD-209ENST00000461120 CXorf56Q9H5V9 222 aa11.77□□□□□ -0.53
CHRD-209ENST00000461120 DYNLRB1Q9NP97 96 aa11.77□□□□□ -0.53
CHRD-209ENST00000461120 GPR160Q9UJ42 338 aa11.77□□□□□ -0.53
CHRD-209ENST00000461120 FBXO9Q9UK97 447 aaPredicted RBP11.77□□□□□ -0.53
CHRD-209ENST00000461120 PMF1-BGLAPU3KQ54 211 aa11.77□□□□□ -0.53
CHRD-209ENST00000461120 ARFGEF3Q5TH69 2177 aa11.77□□□□□ -0.53
CHRD-209ENST00000461120 GGT3PA6NGU5 568 aa11.76□□□□□ -0.53
CHRD-209ENST00000461120 CD300LBA8K4G0 201 aa11.76□□□□□ -0.53
CHRD-209ENST00000461120 IQCF6A8MYZ5 107 aa11.76□□□□□ -0.53
CHRD-209ENST00000461120 HAX1O00165 279 aa11.76□□□□□ -0.53
CHRD-209ENST00000461120 MYL12BO14950 172 aa11.76□□□□□ -0.53
CHRD-209ENST00000461120 BMP4P12644 408 aa11.76□□□□□ -0.53
CHRD-209ENST00000461120 EEF1B2P24534 225 aaKnown RBP11.76□□□□□ -0.53
CHRD-209ENST00000461120 GSK3AP49840 483 aa11.76□□□□□ -0.53
CHRD-209ENST00000461120 MMP15P51511 669 aa11.76□□□□□ -0.53
CHRD-209ENST00000461120 CCR9P51686 369 aa11.76□□□□□ -0.53
CHRD-209ENST00000461120 GABARAPL2P60520 117 aa11.76□□□□□ -0.53
CHRD-209ENST00000461120 ALKBH1Q13686 389 aaKnown RBP11.76□□□□□ -0.53
CHRD-209ENST00000461120 PRSS48Q7RTY5 328 aa11.76□□□□□ -0.53
CHRD-209ENST00000461120 KLBQ86Z14 1044 aa11.76□□□□□ -0.53
CHRD-209ENST00000461120 OR5AS1Q8N127 324 aa11.76□□□□□ -0.53
CHRD-209ENST00000461120 NANOGP1Q8N7R0 232 aa11.76□□□□□ -0.53
CHRD-209ENST00000461120 OR56B2PQ8NGI1 322 aa11.76□□□□□ -0.53
CHRD-209ENST00000461120 HAVCR2Q8TDQ0 301 aa11.76□□□□□ -0.53
CHRD-209ENST00000461120 GATAD2BQ8WXI9 593 aa11.76□□□□□ -0.53
CHRD-209ENST00000461120 SOX7Q9BT81 388 aa11.76□□□□□ -0.53
CHRD-209ENST00000461120 GPR84Q9NQS5 396 aa11.76□□□□□ -0.53
CHRD-209ENST00000461120 BABAM2Q9NXR7 383 aa11.76□□□□□ -0.53
CHRD-209ENST00000461120 FRRS1LQ9P0K9 344 aa11.76□□□□□ -0.53
CHRD-209ENST00000461120 CGGBP1Q9UFW8 167 aaPredicted RBP11.76□□□□□ -0.53
CHRD-209ENST00000461120 ERGIC3Q9Y282 383 aa11.76□□□□□ -0.53
CHRD-209ENST00000461120 PKD1L1Q8TDX9 2849 aa11.75□□□□□ -0.53
CHRD-209ENST00000461120 A0A1B0GTI1 187 aa11.75□□□□□ -0.53
CHRD-209ENST00000461120 PLSCR5A0PG75 271 aa11.75□□□□□ -0.53
CHRD-209ENST00000461120 ZSCAN5BA6NJL1 495 aa11.75□□□□□ -0.53
CHRD-209ENST00000461120 OR4C45A6NMZ5 311 aa11.75□□□□□ -0.53
CHRD-209ENST00000461120 H7C417 338 aa11.75□□□□□ -0.53
CHRD-209ENST00000461120 P2RY10O00398 339 aa11.75□□□□□ -0.53
CHRD-209ENST00000461120 LILRA1O75019 489 aa11.75□□□□□ -0.53
CHRD-209ENST00000461120 LALBAP00709 142 aa11.75□□□□□ -0.53
CHRD-209ENST00000461120 NAT2P11245 290 aa11.75□□□□□ -0.53
CHRD-209ENST00000461120 LIPAP38571 399 aa11.75□□□□□ -0.53
CHRD-209ENST00000461120 TGM4P49221 684 aa11.75□□□□□ -0.53
CHRD-209ENST00000461120 GTF2A1P52655 376 aaPredicted RBP11.75□□□□□ -0.53
CHRD-209ENST00000461120 TNK1Q13470 666 aa11.75□□□□□ -0.53
CHRD-209ENST00000461120 OR8B8Q15620 311 aa11.75□□□□□ -0.53
CHRD-209ENST00000461120 XAF1Q6GPH4 301 aa11.75□□□□□ -0.53
CHRD-209ENST00000461120 Q6ZR03 302 aa11.75□□□□□ -0.53
CHRD-209ENST00000461120 COMMD2Q86X83 199 aa11.75□□□□□ -0.53
CHRD-209ENST00000461120 ZCCHC24Q8N2G6 241 aaKnown RBP11.75□□□□□ -0.53
CHRD-209ENST00000461120 BHLHE23Q8NDY6 225 aa11.75□□□□□ -0.53
CHRD-209ENST00000461120 OR8G5Q8NG78 346 aa11.75□□□□□ -0.53
CHRD-209ENST00000461120 MBD6Q96DN6 1003 aa11.75□□□□□ -0.53
CHRD-209ENST00000461120 FAM71F1Q96KD3 344 aaPredicted RBP11.75□□□□□ -0.53
CHRD-209ENST00000461120 MND1Q9BWT6 205 aa11.75□□□□□ -0.53
CHRD-209ENST00000461120 CCDC90BQ9GZT6 254 aa11.75□□□□□ -0.53
CHRD-209ENST00000461120 MS4A5Q9H3V2 200 aa11.75□□□□□ -0.53
CHRD-209ENST00000461120 MSL2Q9HCI7 577 aa11.75□□□□□ -0.53
CHRD-209ENST00000461120 CYSLTR2Q9NS75 346 aa11.75□□□□□ -0.53
CHRD-209ENST00000461120 ZNF701Q9NV72 531 aaPredicted RBP11.75□□□□□ -0.53
CHRD-209ENST00000461120 BEX4Q9NWD9 120 aaPredicted RBP11.75□□□□□ -0.53
CHRD-209ENST00000461120 LRCH1Q9Y2L9 728 aa11.75□□□□□ -0.53
CHRD-209ENST00000461120 C17orf100A8MU93 164 aa11.74□□□□□ -0.53
CHRD-209ENST00000461120 UBCP0CG48 685 aaKnown RBP11.74□□□□□ -0.53
CHRD-209ENST00000461120 ATP6V1B1P15313 513 aa11.74□□□□□ -0.53
CHRD-209ENST00000461120 PAX1P15863 534 aa11.74□□□□□ -0.53
CHRD-209ENST00000461120 CCL1P22362 96 aa11.74□□□□□ -0.53
CHRD-209ENST00000461120 ACKR3P25106 362 aa11.74□□□□□ -0.53
CHRD-209ENST00000461120 DDOSTP39656 456 aa11.74□□□□□ -0.53
CHRD-209ENST00000461120 ZNF81P51508 661 aa11.74□□□□□ -0.53
CHRD-209ENST00000461120 WNT4P56705 351 aa11.74□□□□□ -0.53
CHRD-209ENST00000461120 DOC2BQ14184 412 aa11.74□□□□□ -0.53
CHRD-209ENST00000461120 CDK5R1Q15078 307 aa11.74□□□□□ -0.53
CHRD-209ENST00000461120 ODF4Q2M2E3 257 aa11.74□□□□□ -0.53
CHRD-209ENST00000461120 DEFB113Q30KQ7 82 aa11.74□□□□□ -0.53
CHRD-209ENST00000461120 CCDC58Q4VC31 144 aa11.74□□□□□ -0.53
CHRD-209ENST00000461120 RPL22L1Q6P5R6 122 aaKnown RBP11.74□□□□□ -0.53
CHRD-209ENST00000461120 PLPP7Q8NBV4 271 aa11.74□□□□□ -0.53
CHRD-209ENST00000461120 ITFG2Q969R8 447 aa11.74□□□□□ -0.53
CHRD-209ENST00000461120 VRK1Q99986 396 aaPredicted RBP11.74□□□□□ -0.53
CHRD-209ENST00000461120 SLC30A2Q9BRI3 323 aa11.74□□□□□ -0.53
CHRD-209ENST00000461120 TPK1Q9H3S4 243 aa11.74□□□□□ -0.53
CHRD-209ENST00000461120 TRIM36Q9NQ86 728 aa11.74□□□□□ -0.53
CHRD-209ENST00000461120 LSM2Q9Y333 95 aaKnown RBP11.74□□□□□ -0.53
CHRD-209ENST00000461120 SIRT4Q9Y6E7 314 aaPredicted RBP11.74□□□□□ -0.53
CHRD-209ENST00000461120 USF3Q68DE3 2245 aa11.74□□□□□ -0.53
CHRD-209ENST00000461120 TRBV2A0A0J9YWF9 115 aa11.73□□□□□ -0.53
CHRD-209ENST00000461120 A0A1B0GVI7 797 aa11.73□□□□□ -0.53
CHRD-209ENST00000461120 LOC107986453A0A1B0GWG9 222 aa11.73□□□□□ -0.53
CHRD-209ENST00000461120 A0A1B0GWJ7 208 aa11.73□□□□□ -0.53
CHRD-209ENST00000461120 LOC390937A0A1W2PQ73 354 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms