RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 ZMYND11Q15326 602 aa17.46■□□□□ 0.39
VARS-218ENST00000459667 PRAMEF6Q5VXH4 476 aa17.46■□□□□ 0.39
VARS-218ENST00000459667 MEDAGQ5VYS4 303 aa17.46■□□□□ 0.39
VARS-218ENST00000459667 IL17RELQ6ZVW7 336 aa17.46■□□□□ 0.39
VARS-218ENST00000459667 ZNF679Q8IYX0 411 aa17.46■□□□□ 0.39
VARS-218ENST00000459667 SPICQ8N5J4 248 aa17.46■□□□□ 0.39
VARS-218ENST00000459667 RFLNBQ8N5W9 214 aa17.46■□□□□ 0.39
VARS-218ENST00000459667 OR8B12Q8NGG6 310 aa17.46■□□□□ 0.39
VARS-218ENST00000459667 OR51G2Q8NGK0 314 aa17.46■□□□□ 0.39
VARS-218ENST00000459667 TMEM186Q96B77 213 aa17.46■□□□□ 0.39
VARS-218ENST00000459667 SMPD3Q9NY59 655 aaPredicted RBP17.46■□□□□ 0.39
VARS-218ENST00000459667 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.45■□□□□ 0.38
VARS-218ENST00000459667 ZNF670-ZNF695F2Z2N8 137 aa17.45■□□□□ 0.38
VARS-218ENST00000459667 MPZL2O60487 215 aa17.45■□□□□ 0.38
VARS-218ENST00000459667 PCMT1P22061 227 aa17.45■□□□□ 0.38
VARS-218ENST00000459667 GSK3AP49840 483 aa17.45■□□□□ 0.38
VARS-218ENST00000459667 ZNF181Q2M3W8 571 aa17.45■□□□□ 0.38
VARS-218ENST00000459667 TMEM155Q4W5P6 130 aa17.45■□□□□ 0.38
VARS-218ENST00000459667 ZNF322Q6U7Q0 402 aaPredicted RBP17.45■□□□□ 0.38
VARS-218ENST00000459667 KLBQ86Z14 1044 aa17.45■□□□□ 0.38
VARS-218ENST00000459667 C1orf87Q8N0U7 546 aa17.45■□□□□ 0.38
VARS-218ENST00000459667 PACRGLQ8N7B6 248 aa17.45■□□□□ 0.38
VARS-218ENST00000459667 SPERTQ8NA61 448 aa17.45■□□□□ 0.38
VARS-218ENST00000459667 ZNF555Q8NEP9 628 aa17.45■□□□□ 0.38
VARS-218ENST00000459667 ERGIC1Q969X5 290 aa17.45■□□□□ 0.38
VARS-218ENST00000459667 DCLRE1BQ9H816 532 aa17.45■□□□□ 0.38
VARS-218ENST00000459667 UFSP2Q9NUQ7 469 aa17.45■□□□□ 0.38
VARS-218ENST00000459667 HIF1ANQ9NWT6 349 aa17.45■□□□□ 0.38
VARS-218ENST00000459667 CLN6Q9NWW5 311 aa17.45■□□□□ 0.38
VARS-218ENST00000459667 FAM206AQ9NX38 181 aa17.45■□□□□ 0.38
VARS-218ENST00000459667 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.45■□□□□ 0.38
VARS-218ENST00000459667 PCDHB10Q9UN67 800 aa17.45■□□□□ 0.38
VARS-218ENST00000459667 JMJD1CQ15652 2540 aa17.45■□□□□ 0.38
VARS-218ENST00000459667 TMEM269A0A1B0GVZ9 245 aa17.44■□□□□ 0.38
VARS-218ENST00000459667 FAM157CP0CG43 387 aa17.44■□□□□ 0.38
VARS-218ENST00000459667 IRF2P14316 349 aa17.44■□□□□ 0.38
VARS-218ENST00000459667 DCTDP32321 178 aa17.44■□□□□ 0.38
VARS-218ENST00000459667 MDH2P40926 338 aaKnown RBP17.44■□□□□ 0.38
VARS-218ENST00000459667 PMELP40967 661 aa17.44■□□□□ 0.38
VARS-218ENST00000459667 RIDAP52758 137 aaKnown RBP17.44■□□□□ 0.38
VARS-218ENST00000459667 SNRPGP62308 76 aaKnown RBP17.44■□□□□ 0.38
VARS-218ENST00000459667 OR8B8Q15620 311 aa17.44■□□□□ 0.38
VARS-218ENST00000459667 LRRC36Q1X8D7 754 aa17.44■□□□□ 0.38
VARS-218ENST00000459667 ZNF829Q3KNS6 432 aaPredicted RBP17.44■□□□□ 0.38
VARS-218ENST00000459667 SLC25A30Q5SVS4 291 aa17.44■□□□□ 0.38
VARS-218ENST00000459667 LRRC28Q86X40 367 aaPredicted RBP17.44■□□□□ 0.38
VARS-218ENST00000459667 MUC20Q8N307 709 aaPredicted RBP17.44■□□□□ 0.38
VARS-218ENST00000459667 GALNT4Q8N4A0 578 aa17.44■□□□□ 0.38
VARS-218ENST00000459667 KLHL36Q8N4N3 616 aa17.44■□□□□ 0.38
VARS-218ENST00000459667 CSNK2A3Q8NEV1 391 aa17.44■□□□□ 0.38
VARS-218ENST00000459667 OR11L1Q8NGX0 322 aa17.44■□□□□ 0.38
VARS-218ENST00000459667 Q8TCH9 128 aa17.44■□□□□ 0.38
VARS-218ENST00000459667 ZNF391Q9UJN7 358 aa17.44■□□□□ 0.38
VARS-218ENST00000459667 TRAV20A0A0B4J274 112 aa17.43■□□□□ 0.38
VARS-218ENST00000459667 LOC100130705A0A1B0GUX0 176 aa17.43■□□□□ 0.38
VARS-218ENST00000459667 ACOD1A6NK06 481 aa17.43■□□□□ 0.38
VARS-218ENST00000459667 E9PQ18 207 aa17.43■□□□□ 0.38
VARS-218ENST00000459667 PLPP2O43688 288 aa17.43■□□□□ 0.38
VARS-218ENST00000459667 FAM20BO75063 409 aa17.43■□□□□ 0.38
VARS-218ENST00000459667 ZNF205O95201 554 aa17.43■□□□□ 0.38
VARS-218ENST00000459667 ELF3P78545 371 aaPredicted RBP17.43■□□□□ 0.38
VARS-218ENST00000459667 MZT1Q08AG7 82 aa17.43■□□□□ 0.38
VARS-218ENST00000459667 MPPED2Q15777 294 aa17.43■□□□□ 0.38
VARS-218ENST00000459667 OR8S1Q8NH09 359 aa17.43■□□□□ 0.38
VARS-218ENST00000459667 LYZL4Q96KX0 146 aa17.43■□□□□ 0.38
VARS-218ENST00000459667 Q96MT0 163 aa17.43■□□□□ 0.38
VARS-218ENST00000459667 TBX5Q99593 518 aa17.43■□□□□ 0.38
VARS-218ENST00000459667 APOL4Q9BPW4 351 aa17.43■□□□□ 0.38
VARS-218ENST00000459667 PAPOLGQ9BWT3 736 aaKnown RBP17.43■□□□□ 0.38
VARS-218ENST00000459667 VCXQ9H320 206 aa17.43■□□□□ 0.38
VARS-218ENST00000459667 FN3KRPQ9HA64 309 aa17.43■□□□□ 0.38
VARS-218ENST00000459667 C14orf119Q9NWQ9 140 aa17.43■□□□□ 0.38
VARS-218ENST00000459667 FAM118AQ9NWS6 357 aa17.43■□□□□ 0.38
VARS-218ENST00000459667 APOL3O95236 402 aa17.42■□□□□ 0.38
VARS-218ENST00000459667 PTBP3O95758 552 aaKnown RBP17.42■□□□□ 0.38
VARS-218ENST00000459667 SRD5A1P18405 259 aa17.42■□□□□ 0.38
VARS-218ENST00000459667 PEX2P28328 305 aa17.42■□□□□ 0.38
VARS-218ENST00000459667 GNALP38405 381 aa17.42■□□□□ 0.38
VARS-218ENST00000459667 EGR3Q06889 387 aa17.42■□□□□ 0.38
VARS-218ENST00000459667 SNCBQ16143 134 aa17.42■□□□□ 0.38
VARS-218ENST00000459667 OCLNQ16625 522 aa17.42■□□□□ 0.38
VARS-218ENST00000459667 LPCAT4Q643R3 524 aa17.42■□□□□ 0.38
VARS-218ENST00000459667 FTMTQ8N4E7 242 aa17.42■□□□□ 0.38
VARS-218ENST00000459667 PLPP7Q8NBV4 271 aa17.42■□□□□ 0.38
VARS-218ENST00000459667 UBE2FQ969M7 185 aa17.42■□□□□ 0.38
VARS-218ENST00000459667 PBOV1Q9GZY1 135 aa17.42■□□□□ 0.38
VARS-218ENST00000459667 PATZ1Q9HBE1 687 aaKnown RBP17.42■□□□□ 0.38
VARS-218ENST00000459667 RHBDD3Q9Y3P4 386 aa17.42■□□□□ 0.38
VARS-218ENST00000459667 A0A0U1RQV5 110 aa17.41■□□□□ 0.38
VARS-218ENST00000459667 SLC16A6O15403 523 aa17.41■□□□□ 0.38
VARS-218ENST00000459667 MAGEB4O15481 346 aaPredicted RBP17.41■□□□□ 0.38
VARS-218ENST00000459667 OR2T7P0C7T2 308 aa17.41■□□□□ 0.38
VARS-218ENST00000459667 ACKR3P25106 362 aa17.41■□□□□ 0.38
VARS-218ENST00000459667 MFGE8Q08431 387 aaPredicted RBP17.41■□□□□ 0.38
VARS-218ENST00000459667 FAM201AQ5SY85 155 aa17.41■□□□□ 0.38
VARS-218ENST00000459667 SSX6Q7RTT6 188 aa17.41■□□□□ 0.38
VARS-218ENST00000459667 COMMD2Q86X83 199 aa17.41■□□□□ 0.38
VARS-218ENST00000459667 OR2T27Q8NH04 317 aa17.41■□□□□ 0.38
VARS-218ENST00000459667 NUFIP1Q9UHK0 495 aaKnown RBP17.41■□□□□ 0.38
VARS-218ENST00000459667 GTF2A1LQ9UNN4 478 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms