RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 AKR1C4P17516 323 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 PGCP20142 388 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 GABRA4P48169 554 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 CAV2P51636 162 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 CARD18P57730 90 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 VAX1Q5SQQ9 334 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 TCEAL6Q6IPX3 200 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 ARMC6Q6NXE6 501 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 Q6ZSR6 202 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 REC114Q7Z4M0 266 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 MARCH3Q86UD3 253 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 ZNF761Q86XN6 746 aaPredicted RBP7.55□□□□□ -1.2
VPS50-208ENST00000458707 SLC22A18ASQ8N1D0 253 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 SLC22A24Q8N4F4 322 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 ZNF321PQ8N8H1 164 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 WDSUB1Q8N9V3 476 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 OR10R2Q8NGX6 335 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 OR10J5Q8NHC4 309 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 TERB2Q8NHR7 220 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 MARCH1Q8TCQ1 289 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 RXFP4Q8TDU9 374 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 ROBO4Q8WZ75 1007 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 NKD1Q969G9 470 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 CMBLQ96DG6 245 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 ADOQ96SZ5 270 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 EGLN1Q9GZT9 426 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 DUSP15Q9H1R2 295 aaPredicted RBP7.55□□□□□ -1.2
VPS50-208ENST00000458707 TCEAL2Q9H3H9 227 aaPredicted RBP7.55□□□□□ -1.2
VPS50-208ENST00000458707 TREM1Q9NP99 234 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 GPR132Q9UNW8 380 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 TP53TG5Q9Y2B4 290 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 COA3Q9Y2R0 106 aaPredicted RBP7.55□□□□□ -1.2
VPS50-208ENST00000458707 TMEM184BQ9Y519 407 aaPredicted RBP7.55□□□□□ -1.2
VPS50-208ENST00000458707 LOC100996750A0A140TA64 210 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 TMEM269A0A1B0GVZ9 245 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 COLCA2A8K830 154 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 A8MVM7 634 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 H0YIG0 161 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 UBE2CO00762 179 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 HCRTR2O43614 444 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 TSPAN2O60636 221 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 WISP1O95388 367 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 SFT2D2O95562 160 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 F12P00748 615 aaPredicted RBP7.55□□□□□ -1.2
VPS50-208ENST00000458707 MBP02144 154 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 IFNA6P05013 189 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 CHRM2P08172 466 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 CELA2BP08218 269 aaPredicted RBP7.55□□□□□ -1.2
VPS50-208ENST00000458707 GP1BBP13224 206 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 AKT2P31751 481 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 CEACAM6P40199 344 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 POLR2HP52434 150 aaKnown RBP7.55□□□□□ -1.2
VPS50-208ENST00000458707 SLC26A5P58743 744 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 DCAF7P61962 342 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 HHEXQ03014 270 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 ZP2Q05996 745 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 PDZK1IP1Q13113 114 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 IL15RAQ13261 267 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 GFOD2Q3B7J2 385 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 ACTBL2Q562R1 376 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 C1orf140Q5VVS0 124 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 TMPPEQ6ZT21 453 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 SLC16A13Q7RTY0 426 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 DCXRQ7Z4W1 244 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 PEG10Q86TG7 708 aaKnown RBP7.55□□□□□ -1.2
VPS50-208ENST00000458707 ARRDC1Q8N5I2 433 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 CHST4Q8NCG5 386 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 OR52N4Q8NGI2 321 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 DTD1Q8TEA8 209 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 TMEM230Q96A57 120 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 MMABQ96EY8 250 aaPredicted RBP7.55□□□□□ -1.2
VPS50-208ENST00000458707 TCTN2Q96GX1 697 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 C14orf144Q96I85 54 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 MRGPRX1Q96LB2 322 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 GUCD1Q96NT3 240 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 PFDN5Q99471 154 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 CMSS1Q9BQ75 279 aaKnown RBP7.55□□□□□ -1.2
VPS50-208ENST00000458707 OCSTAMPQ9BR26 566 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 KRTAP4-6Q9BYQ5 205 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 RIMS4Q9H426 269 aaPredicted RBP7.55□□□□□ -1.2
VPS50-208ENST00000458707 C5orf66Q9H5L9 145 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 RHOFQ9HBH0 211 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 LANCL2Q9NS86 450 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 LUZP4Q9P127 313 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 PPP4R1LQ9P1A2 415 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 DNAJB11Q9UBS4 358 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 ATXN7L1Q9ULK2 861 aaPredicted RBP7.55□□□□□ -1.2
VPS50-208ENST00000458707 SLC5A6Q9Y289 635 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 WIF1Q9Y5W5 379 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 RALGAPA1Q6GYQ0 2036 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 TMED7-TICAM2A0A0A6YYA0 188 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 LOC101059948A0A1B0GTJ6 334 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 C13orf42A0A1B0GVH6 325 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 MSGN1A6NI15 193 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 A6NIZ1 184 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 NPIPB13A6NJU9 1138 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 ZNF705EA8MWA4 302 aaPredicted RBP7.54□□□□□ -1.2
VPS50-208ENST00000458707 A8MXE2 369 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 NPIPB4C9JG80 1138 aa7.54□□□□□ -1.2
VPS50-208ENST00000458707 FTCDNL1E5RQL4 147 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms