RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 XRCC2O43543 280 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 TIPRLO75663 272 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 DIRAS1O95057 198 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 SEMG1P04279 462 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 DUX4L2P0CJ85 424 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 DUX4L3P0CJ86 424 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 DUX4L4P0CJ87 422 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 DUX4L5P0CJ88 424 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 DUX4L6P0CJ89 424 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 DUX4L7P0CJ90 424 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 PSKH1P11801 424 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 COX4I1P13073 169 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 NCK1P16333 377 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 ZNF823P16415 610 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 EEF1B2P24534 225 aaKnown RBP8.55□□□□□ -1.04
HDLBP-227ENST00000458564 RPS27P42677 84 aaKnown RBP8.55□□□□□ -1.04
HDLBP-227ENST00000458564 GSSP48637 474 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 KRT72Q14CN4 511 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 ATPAF1Q5TC12 328 aaPredicted RBP8.55□□□□□ -1.04
HDLBP-227ENST00000458564 SAMD5Q5TGI4 173 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 C11orf88Q6PI97 169 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 DUX4L9Q6RFH8 374 aaPredicted RBP8.55□□□□□ -1.04
HDLBP-227ENST00000458564 WDR82Q6UXN9 313 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 C1orf122Q6ZSJ8 110 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 HDXQ7Z353 690 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 REC114Q7Z4M0 266 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 ZDHHC21Q8IVQ6 265 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 FGFRL1Q8N441 504 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 FAM216BQ8N7L0 139 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 FAM86B1Q8N7N1 296 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 Q8N7P7 452 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 OR2T4Q8NH00 348 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 OR52J3Q8NH60 311 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 LRRC29Q8WV35 223 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 TNFRSF14Q92956 283 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 KCNJ15Q99712 375 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 COPS4Q9BT78 406 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 DCTN5Q9BTE1 182 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 DNTTIP1Q9H147 329 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 TLNRD1Q9H1K6 362 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 EFCAB1Q9HAE3 211 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 SIRT7Q9NRC8 400 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 DUX4Q9UBX2 424 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 COMMD3-BMI1R4GMX3 469 aa8.55□□□□□ -1.04
HDLBP-227ENST00000458564 KMT2CQ8NEZ4 4911 aaKnown RBP8.55□□□□□ -1.04
HDLBP-227ENST00000458564 TET2Q6N021 2002 aaPredicted RBP8.54□□□□□ -1.04
HDLBP-227ENST00000458564 NOTCH3Q9UM47 2321 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 ANKRD30BLA7E2S9 258 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 G3V4G9 280 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 GADD45GO95257 159 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 AMY2BP19961 511 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 GABRA5P31644 462 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 SAA4P35542 130 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 IFNGR2P38484 337 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 TGM4P49221 684 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 UBE2E1P51965 193 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.54□□□□□ -1.04
HDLBP-227ENST00000458564 ACSM1Q08AH1 577 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 POU4F2Q12837 409 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 TSPAN31Q12999 210 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 HERPUD1Q15011 391 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 TEX30Q5JUR7 227 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 NCR3LG1Q68D85 454 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 STUMQ69YW2 141 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 RPL13AP3Q6NVV1 102 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 Q6ZPA2 131 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 Q6ZTK2 550 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 DCXRQ7Z4W1 244 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 BEND2Q8NDZ0 799 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 PROKR2Q8NFJ6 384 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 OR1M1Q8NGA1 313 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 OR8S1Q8NH09 359 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 CFHR4Q92496 578 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 CCL13Q99616 98 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 NSRP1Q9H0G5 558 aaKnown RBP8.54□□□□□ -1.04
HDLBP-227ENST00000458564 GORASP2Q9H8Y8 452 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 ADA2Q9NZK5 511 aa8.54□□□□□ -1.04
HDLBP-227ENST00000458564 hCG_38984A0A1B0GV85 526 aa8.53□□□□□ -1.04
HDLBP-227ENST00000458564 ZNF878C9JN71 531 aa8.53□□□□□ -1.04
HDLBP-227ENST00000458564 M0R1W7 72 aa8.53□□□□□ -1.04
HDLBP-227ENST00000458564 ACOT8O14734 319 aa8.53□□□□□ -1.04
HDLBP-227ENST00000458564 NDUFB3O43676 98 aa8.53□□□□□ -1.04
HDLBP-227ENST00000458564 PAHP00439 452 aa8.53□□□□□ -1.04
HDLBP-227ENST00000458564 SLC2A1P11166 492 aa8.53□□□□□ -1.04
HDLBP-227ENST00000458564 CFL1P23528 166 aaKnown RBP8.53□□□□□ -1.04
HDLBP-227ENST00000458564 PYCR1P32322 319 aa8.53□□□□□ -1.04
HDLBP-227ENST00000458564 NAA10P41227 235 aaPredicted RBP8.53□□□□□ -1.04
HDLBP-227ENST00000458564 NUDT2P50583 147 aa8.53□□□□□ -1.04
HDLBP-227ENST00000458564 PRKXP51817 358 aa8.53□□□□□ -1.04
HDLBP-227ENST00000458564 EFNB2P52799 333 aa8.53□□□□□ -1.04
HDLBP-227ENST00000458564 CSNK2BP67870 215 aa8.53□□□□□ -1.04
HDLBP-227ENST00000458564 ELF3P78545 371 aaPredicted RBP8.53□□□□□ -1.04
HDLBP-227ENST00000458564 FAM3AP98173 230 aa8.53□□□□□ -1.04
HDLBP-227ENST00000458564 SPIBQ01892 262 aa8.53□□□□□ -1.04
HDLBP-227ENST00000458564 SF3A3Q12874 501 aaKnown RBP eCLIP8.53□□□□□ -1.045e-6■■■□□ 16.9
HDLBP-227ENST00000458564 LRRC10Q5BKY1 277 aa8.53□□□□□ -1.04
HDLBP-227ENST00000458564 SLC35F1Q5T1Q4 408 aa8.53□□□□□ -1.04
HDLBP-227ENST00000458564 HIST2H2BDQ6DRA6 164 aa8.53□□□□□ -1.04
HDLBP-227ENST00000458564 GLYATQ6IB77 296 aa8.53□□□□□ -1.04
HDLBP-227ENST00000458564 SLC35E4Q6ICL7 350 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms