RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 APOC1P02654 83 aa17.77■□□□□ 0.44
CPNE1-220ENST00000458038 PRKXP51817 358 aa17.77■□□□□ 0.44
CPNE1-220ENST00000458038 BLVRAP53004 296 aa17.77■□□□□ 0.44
CPNE1-220ENST00000458038 HOXA4Q00056 320 aaPredicted RBP17.77■□□□□ 0.44
CPNE1-220ENST00000458038 TAF9Q16594 264 aa17.77■□□□□ 0.44
CPNE1-220ENST00000458038 PGBD2Q6P3X8 592 aa17.77■□□□□ 0.44
CPNE1-220ENST00000458038 METAP1DQ6UB28 335 aaPredicted RBP17.77■□□□□ 0.44
CPNE1-220ENST00000458038 ZNF826PQ6ZT77 177 aa17.77■□□□□ 0.44
CPNE1-220ENST00000458038 RHOUQ7L0Q8 258 aa17.77■□□□□ 0.44
CPNE1-220ENST00000458038 SLC36A1Q7Z2H8 476 aa17.77■□□□□ 0.44
CPNE1-220ENST00000458038 CMTM4Q8IZR5 234 aa17.77■□□□□ 0.44
CPNE1-220ENST00000458038 CYB561A3Q8NBI2 242 aa17.77■□□□□ 0.44
CPNE1-220ENST00000458038 OR8S1Q8NH09 359 aa17.77■□□□□ 0.44
CPNE1-220ENST00000458038 UBE2FQ969M7 185 aa17.77■□□□□ 0.44
CPNE1-220ENST00000458038 CENPMQ9NSP4 180 aa17.77■□□□□ 0.44
CPNE1-220ENST00000458038 COMMD3-BMI1R4GMX3 469 aa17.77■□□□□ 0.44
CPNE1-220ENST00000458038 A0A0U1RQK1 487 aa17.76■□□□□ 0.43
CPNE1-220ENST00000458038 TVP23AA6NH52 213 aa17.76■□□□□ 0.43
CPNE1-220ENST00000458038 IGHV4-59P01825 116 aa17.76■□□□□ 0.43
CPNE1-220ENST00000458038 CFL1P23528 166 aaKnown RBP17.76■□□□□ 0.43
CPNE1-220ENST00000458038 NAA10P41227 235 aaPredicted RBP17.76■□□□□ 0.43
CPNE1-220ENST00000458038 RPS27P42677 84 aaKnown RBP17.76■□□□□ 0.43
CPNE1-220ENST00000458038 ENTPD1P49961 510 aa17.76■□□□□ 0.43
CPNE1-220ENST00000458038 GRB2P62993 217 aaKnown RBP17.76■□□□□ 0.43
CPNE1-220ENST00000458038 SNCBQ16143 134 aa17.76■□□□□ 0.43
CPNE1-220ENST00000458038 SAMD4BQ5PRF9 694 aaKnown RBP17.76■□□□□ 0.43
CPNE1-220ENST00000458038 ZSCAN4Q8NAM6 433 aaPredicted RBP17.76■□□□□ 0.43
CPNE1-220ENST00000458038 ST8SIA4Q92187 359 aa17.76■□□□□ 0.43
CPNE1-220ENST00000458038 C12orf43Q96C57 262 aaKnown RBP17.76■□□□□ 0.43
CPNE1-220ENST00000458038 SLAMF6Q96DU3 332 aa17.76■□□□□ 0.43
CPNE1-220ENST00000458038 RBM4BQ9BQ04 359 aaKnown RBP17.76■□□□□ 0.43
CPNE1-220ENST00000458038 TOR3AQ9H497 397 aa17.76■□□□□ 0.43
CPNE1-220ENST00000458038 EGLN3Q9H6Z9 239 aa17.76■□□□□ 0.43
CPNE1-220ENST00000458038 BAIAP2Q9UQB8 552 aa17.76■□□□□ 0.43
CPNE1-220ENST00000458038 CMYA5Q8N3K9 4069 aa17.76■□□□□ 0.43
CPNE1-220ENST00000458038 BTBD17A6NE02 478 aa17.75■□□□□ 0.43
CPNE1-220ENST00000458038 ZNF593O00488 134 aaPredicted RBP17.75■□□□□ 0.43
CPNE1-220ENST00000458038 FBP1P09467 338 aa17.75■□□□□ 0.43
CPNE1-220ENST00000458038 PROK1P58294 105 aa17.75■□□□□ 0.43
CPNE1-220ENST00000458038 GUCA2AQ02747 115 aa17.75■□□□□ 0.43
CPNE1-220ENST00000458038 SPATS1Q496A3 300 aa17.75■□□□□ 0.43
CPNE1-220ENST00000458038 ASPHD2Q6ICH7 369 aa17.75■□□□□ 0.43
CPNE1-220ENST00000458038 DPY19L4Q7Z388 723 aa17.75■□□□□ 0.43
CPNE1-220ENST00000458038 LNX2Q8N448 690 aa17.75■□□□□ 0.43
CPNE1-220ENST00000458038 LY6G5BQ8NDX9 201 aa17.75■□□□□ 0.43
CPNE1-220ENST00000458038 C16orf95Q9H693 158 aa17.75■□□□□ 0.43
CPNE1-220ENST00000458038 SPARCP09486 303 aa17.74■□□□□ 0.43
CPNE1-220ENST00000458038 SLC25A1P53007 311 aa17.74■□□□□ 0.43
CPNE1-220ENST00000458038 RASSF6Q6ZTQ3 369 aa17.74■□□□□ 0.43
CPNE1-220ENST00000458038 VMO1Q7Z5L0 202 aa17.74■□□□□ 0.43
CPNE1-220ENST00000458038 SLC37A3Q8NCC5 494 aa17.74■□□□□ 0.43
CPNE1-220ENST00000458038 OR52H1Q8NGJ2 320 aa17.74■□□□□ 0.43
CPNE1-220ENST00000458038 LRRC29Q8WV35 223 aa17.74■□□□□ 0.43
CPNE1-220ENST00000458038 TCF7L1Q9HCS4 588 aa17.74■□□□□ 0.43
CPNE1-220ENST00000458038 N6AMT1Q9Y5N5 214 aa17.74■□□□□ 0.43
CPNE1-220ENST00000458038 C5orf63A6NC05 138 aa17.73■□□□□ 0.43
CPNE1-220ENST00000458038 ARPC2O15144 300 aa17.73■□□□□ 0.43
CPNE1-220ENST00000458038 FCN3O75636 299 aa17.73■□□□□ 0.43
CPNE1-220ENST00000458038 SLC2A1P11166 492 aa17.73■□□□□ 0.43
CPNE1-220ENST00000458038 EEF1B2P24534 225 aaKnown RBP17.73■□□□□ 0.43
CPNE1-220ENST00000458038 FAM3AP98173 230 aa17.73■□□□□ 0.43
CPNE1-220ENST00000458038 TIGD6Q17RP2 521 aa17.73■□□□□ 0.43
CPNE1-220ENST00000458038 SLC16A9Q7RTY1 509 aa17.73■□□□□ 0.43
CPNE1-220ENST00000458038 C11orf53Q8IXP5 236 aa17.73■□□□□ 0.43
CPNE1-220ENST00000458038 PGAM4Q8N0Y7 254 aa17.73■□□□□ 0.43
CPNE1-220ENST00000458038 FTMTQ8N4E7 242 aa17.73■□□□□ 0.43
CPNE1-220ENST00000458038 PIP4P2Q8N4L2 257 aa17.73■□□□□ 0.43
CPNE1-220ENST00000458038 CSNK2A3Q8NEV1 391 aa17.73■□□□□ 0.43
CPNE1-220ENST00000458038 OR1M1Q8NGA1 313 aa17.73■□□□□ 0.43
CPNE1-220ENST00000458038 OR51L1Q8NGJ5 315 aa17.73■□□□□ 0.43
CPNE1-220ENST00000458038 ZNRF4Q8WWF5 429 aa17.73■□□□□ 0.43
CPNE1-220ENST00000458038 ELAC2Q9BQ52 826 aaKnown RBP17.73■□□□□ 0.43
CPNE1-220ENST00000458038 NMNAT2Q9BZQ4 307 aa17.73■□□□□ 0.43
CPNE1-220ENST00000458038 DNTTIP1Q9H147 329 aa17.73■□□□□ 0.43
CPNE1-220ENST00000458038 MED4Q9NPJ6 270 aa17.73■□□□□ 0.43
CPNE1-220ENST00000458038 PRPF19Q9UMS4 504 aaKnown RBP17.73■□□□□ 0.43
CPNE1-220ENST00000458038 LYVE1Q9Y5Y7 322 aa17.73■□□□□ 0.43
CPNE1-220ENST00000458038 IGHV3OR15-7A0A075B7D8 119 aa17.72■□□□□ 0.43
CPNE1-220ENST00000458038 SLC22A31A6NKX4 558 aa17.72■□□□□ 0.43
CPNE1-220ENST00000458038 TBX1O43435 398 aa17.72■□□□□ 0.43
CPNE1-220ENST00000458038 NDUFB3O43676 98 aa17.72■□□□□ 0.43
CPNE1-220ENST00000458038 KRTAP10-3P60369 221 aa17.72■□□□□ 0.43
CPNE1-220ENST00000458038 LRRC10Q5BKY1 277 aa17.72■□□□□ 0.43
CPNE1-220ENST00000458038 WDR38Q5JTN6 314 aa17.72■□□□□ 0.43
CPNE1-220ENST00000458038 ATPAF1Q5TC12 328 aaPredicted RBP17.72■□□□□ 0.43
CPNE1-220ENST00000458038 WDR82Q6UXN9 313 aa17.72■□□□□ 0.43
CPNE1-220ENST00000458038 C1orf122Q6ZSJ8 110 aa17.72■□□□□ 0.43
CPNE1-220ENST00000458038 ZNF511Q8NB15 262 aa17.72■□□□□ 0.43
CPNE1-220ENST00000458038 OR9Q1Q8NGQ5 310 aa17.72■□□□□ 0.43
CPNE1-220ENST00000458038 REEP6Q96HR9 211 aa17.72■□□□□ 0.43
CPNE1-220ENST00000458038 CCL13Q99616 98 aa17.72■□□□□ 0.43
CPNE1-220ENST00000458038 TBC1D23Q9NUY8 699 aa17.72■□□□□ 0.43
CPNE1-220ENST00000458038 ONECUT1Q9UBC0 465 aa17.72■□□□□ 0.43
CPNE1-220ENST00000458038 DHRS12A0PJE2 317 aa17.71■□□□□ 0.43
CPNE1-220ENST00000458038 TNFRSF11BO00300 401 aa17.71■□□□□ 0.43
CPNE1-220ENST00000458038 TSPAN9O75954 239 aa17.71■□□□□ 0.43
CPNE1-220ENST00000458038 IFNGP01579 166 aa17.71■□□□□ 0.43
CPNE1-220ENST00000458038 ANXA2P07355 339 aaKnown RBP17.71■□□□□ 0.43
CPNE1-220ENST00000458038 PSKH1P11801 424 aa17.71■□□□□ 0.43
CPNE1-220ENST00000458038 SPI1P17947 270 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms