RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 ZNF768Q9H5H4 540 aaKnown RBP8.91□□□□□ -0.98
CHCHD4P3-201ENST00000455954 RHOFQ9HBH0 211 aa8.91□□□□□ -0.98
CHCHD4P3-201ENST00000455954 PARP11Q9NR21 331 aa8.91□□□□□ -0.98
CHCHD4P3-201ENST00000455954 PRTFDC1Q9NRG1 225 aa8.91□□□□□ -0.98
CHCHD4P3-201ENST00000455954 HRASLS2Q9NWW9 162 aa8.91□□□□□ -0.98
CHCHD4P3-201ENST00000455954 PPP4R1LQ9P1A2 415 aa8.91□□□□□ -0.98
CHCHD4P3-201ENST00000455954 MEMO1Q9Y316 297 aa8.91□□□□□ -0.98
CHCHD4P3-201ENST00000455954 PKD1L2Q7Z442 2459 aa8.91□□□□□ -0.98
CHCHD4P3-201ENST00000455954 A0A1W2PQD3 144 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 C5orf51A6NDU8 294 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 C5orf52A6NGY3 159 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 A6NIZ1 184 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 NPIPB13A6NJU9 1138 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 COLCA2A8K830 154 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 NPIPB4C9JG80 1138 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 RAB27BO00194 218 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 CLDN4O14493 209 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 SIGLEC5O15389 551 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 GATCO43716 136 aaKnown RBP8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 IFNA6P05013 189 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 ERCC1P07992 297 aaPredicted RBP8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 ACAA1P09110 424 aaPredicted RBP8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 FBXO45P0C2W1 286 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 RCC1P18754 421 aaPredicted RBP8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 FPR2P25090 351 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 SERPINF1P36955 418 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 SULT1A2P50226 295 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 RAP1BP61224 184 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 RAP1AP62834 184 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 QRFPP83859 136 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 HABP2Q14520 560 aaPredicted RBP8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 IL11RAQ14626 422 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 ATXN7L3Q14CW9 347 aaPredicted RBP8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 PCK2Q16822 640 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 PRTGQ2VWP7 1150 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 TMEM128Q5BJH2 165 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 ARMC6Q6NXE6 501 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 MDGA2Q7Z553 956 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 PEG10Q86TG7 708 aaKnown RBP8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 OOSP2Q86WS3 158 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 SLC22A24Q8N4F4 322 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 ZNF615Q8N8J6 731 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 PLPP7Q8NBV4 271 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 OR13C3Q8NGS6 347 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 DOK4Q8TEW6 326 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 METTL21AQ8WXB1 218 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 NKD1Q969G9 470 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 MRGPRFQ96AM1 343 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 MALSU1Q96EH3 234 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 SEC22AQ96IW7 307 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 C2orf50Q96LR7 162 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 AMELYQ99218 206 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 RNF126Q9BV68 326 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 ULBP3Q9BZM4 244 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 OR10A5Q9H207 317 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 TXNIPQ9H3M7 391 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 SEBOXQ9HB31 216 aaPredicted RBP8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 SEMA5BQ9P283 1151 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 METTL1Q9UBP6 276 aaKnown RBP8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 EDARQ9UNE0 448 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 GTF2A1LQ9UNN4 478 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 FARSAQ9Y285 508 aaKnown RBP8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 LRP12Q9Y561 859 aa8.9□□□□□ -0.98
CHCHD4P3-201ENST00000455954 ASPMQ8IZT6 3477 aa8.9□□□□□ -0.99
CHCHD4P3-201ENST00000455954 LOC107986453A0A1B0GWG9 222 aa8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 OR6C76A6NM76 312 aa8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 ZNF705EA8MWA4 302 aaPredicted RBP8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 RNASEK-C17orf49H0YIS7 233 aa8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 ATXN7O15265 892 aaPredicted RBP8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 EIF3GO75821 320 aaKnown RBP eCLIP8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 PNPP00491 289 aa8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 MT-ND4LP03901 98 aa8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 CSTBP04080 98 aaKnown RBP8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 F13BP05160 661 aa8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 SPARCP09486 303 aa8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 MUC1P15941 1255 aaPredicted RBP8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 S100PP25815 95 aa8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 ADH6P28332 368 aa8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 ECI1P42126 302 aa8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 DVL1P1P54792 670 aaPredicted RBP8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 F2RL1P55085 397 aa8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 HSD17B7P56937 341 aa8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 PPP1CAP62136 330 aa8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 MFGE8Q08431 387 aaPredicted RBP8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 EIF2B1Q14232 305 aaKnown RBP8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 SMCO1Q147U7 214 aa8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 SURF2Q15527 256 aaPredicted RBP8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 GFOD2Q3B7J2 385 aa8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 LRRC37A5PQ49AS3 106 aa8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 BEX5Q5H9J7 111 aa8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 CORO6Q6QEF8 472 aa8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 BTNL8Q6UX41 500 aa8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 VASH2Q86V25 355 aa8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 KMT5CQ86Y97 462 aa8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 JAGN1Q8N5M9 183 aa8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 IL22RA1Q8N6P7 574 aa8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 ZSCAN4Q8NAM6 433 aaPredicted RBP8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 ZSCAN1Q8NBB4 408 aa8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 OR4C3Q8NH37 302 aa8.89□□□□□ -0.99
CHCHD4P3-201ENST00000455954 C16orf52Q8NHV5 167 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms