RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 MAP2K3P46734 347 aa12.21□□□□□ -0.45
HMGXB4-204ENST00000455359 ZNF81P51508 661 aa12.21□□□□□ -0.45
HMGXB4-204ENST00000455359 ACSM1Q08AH1 577 aa12.21□□□□□ -0.45
HMGXB4-204ENST00000455359 ALKBH1Q13686 389 aaKnown RBP12.21□□□□□ -0.45
HMGXB4-204ENST00000455359 KCTD21Q4G0X4 260 aa12.21□□□□□ -0.45
HMGXB4-204ENST00000455359 OR2G6Q5TZ20 316 aa12.21□□□□□ -0.45
HMGXB4-204ENST00000455359 PRSS35Q8N3Z0 413 aa12.21□□□□□ -0.45
HMGXB4-204ENST00000455359 OR51E1Q8TCB6 317 aa12.21□□□□□ -0.45
HMGXB4-204ENST00000455359 C10orf35Q96D05 121 aa12.21□□□□□ -0.45
HMGXB4-204ENST00000455359 SLC30A2Q9BRI3 323 aa12.21□□□□□ -0.45
HMGXB4-204ENST00000455359 TMEM100Q9NV29 134 aa12.21□□□□□ -0.45
HMGXB4-204ENST00000455359 FRRS1LQ9P0K9 344 aa12.21□□□□□ -0.45
HMGXB4-204ENST00000455359 SLC22A13Q9Y226 551 aa12.21□□□□□ -0.45
HMGXB4-204ENST00000455359 TRIM64A6NGJ6 449 aa12.2□□□□□ -0.46
HMGXB4-204ENST00000455359 OR4C45A6NMZ5 311 aa12.2□□□□□ -0.46
HMGXB4-204ENST00000455359 ANKRD30BLA7E2S9 258 aa12.2□□□□□ -0.46
HMGXB4-204ENST00000455359 OGG1O15527 345 aa12.2□□□□□ -0.46
HMGXB4-204ENST00000455359 GMDSO60547 372 aa12.2□□□□□ -0.46
HMGXB4-204ENST00000455359 DHRS3O75911 302 aa12.2□□□□□ -0.46
HMGXB4-204ENST00000455359 F12P00748 615 aaPredicted RBP12.2□□□□□ -0.46
HMGXB4-204ENST00000455359 CST4P01036 141 aa12.2□□□□□ -0.46
HMGXB4-204ENST00000455359 CD1AP06126 327 aa12.2□□□□□ -0.46
HMGXB4-204ENST00000455359 CD55P08174 381 aa12.2□□□□□ -0.46
HMGXB4-204ENST00000455359 ANOS1P23352 680 aa12.2□□□□□ -0.46
HMGXB4-204ENST00000455359 TNFSF4P23510 183 aa12.2□□□□□ -0.46
HMGXB4-204ENST00000455359 ALDH3B1P43353 468 aa12.2□□□□□ -0.46
HMGXB4-204ENST00000455359 KIR3DL2P43630 455 aa12.2□□□□□ -0.46
HMGXB4-204ENST00000455359 EFNA4P52798 201 aa12.2□□□□□ -0.46
HMGXB4-204ENST00000455359 NANOS3P60323 173 aaKnown RBP12.2□□□□□ -0.46
HMGXB4-204ENST00000455359 MRPS11P82912 194 aaKnown RBP12.2□□□□□ -0.46
HMGXB4-204ENST00000455359 MZT1Q08AG7 82 aa12.2□□□□□ -0.46
HMGXB4-204ENST00000455359 RIPPLY1Q0D2K3 151 aa12.2□□□□□ -0.46
HMGXB4-204ENST00000455359 GFOD2Q3B7J2 385 aa12.2□□□□□ -0.46
HMGXB4-204ENST00000455359 COMMD2Q86X83 199 aa12.2□□□□□ -0.46
HMGXB4-204ENST00000455359 SPERTQ8NA61 448 aa12.2□□□□□ -0.46
HMGXB4-204ENST00000455359 SEMA6DQ8NFY4 1073 aa12.2□□□□□ -0.46
HMGXB4-204ENST00000455359 OR56B2PQ8NGI1 322 aa12.2□□□□□ -0.46
HMGXB4-204ENST00000455359 RPS4Y2Q8TD47 263 aa12.2□□□□□ -0.46
HMGXB4-204ENST00000455359 GATAD2BQ8WXI9 593 aa12.2□□□□□ -0.46
HMGXB4-204ENST00000455359 LYZL4Q96KX0 146 aa12.2□□□□□ -0.46
HMGXB4-204ENST00000455359 COMMD4Q9H0A8 199 aa12.2□□□□□ -0.46
HMGXB4-204ENST00000455359 RAI1Q7Z5J4 1906 aaPredicted RBP12.19□□□□□ -0.46
HMGXB4-204ENST00000455359 TRBV2A0A0J9YWF9 115 aa12.19□□□□□ -0.46
HMGXB4-204ENST00000455359 A0A1B0GTI1 187 aa12.19□□□□□ -0.46
HMGXB4-204ENST00000455359 E9PI62 339 aa12.19□□□□□ -0.46
HMGXB4-204ENST00000455359 SYT7O43581 403 aa12.19□□□□□ -0.46
HMGXB4-204ENST00000455359 ACHEP22303 614 aa12.19□□□□□ -0.46
HMGXB4-204ENST00000455359 PTH2RP49190 550 aa12.19□□□□□ -0.46
HMGXB4-204ENST00000455359 CDK5R1Q15078 307 aa12.19□□□□□ -0.46
HMGXB4-204ENST00000455359 SPHARQ15513 63 aa12.19□□□□□ -0.46
HMGXB4-204ENST00000455359 TBCEQ15813 527 aaPredicted RBP12.19□□□□□ -0.46
HMGXB4-204ENST00000455359 ALKBH6Q3KRA9 238 aa12.19□□□□□ -0.46
HMGXB4-204ENST00000455359 TMEM255AQ5JRV8 349 aa12.19□□□□□ -0.46
HMGXB4-204ENST00000455359 SVOPQ8N4V2 548 aa12.19□□□□□ -0.46
HMGXB4-204ENST00000455359 FOXC2Q99958 501 aa12.19□□□□□ -0.46
HMGXB4-204ENST00000455359 VRK1Q99986 396 aaPredicted RBP12.19□□□□□ -0.46
HMGXB4-204ENST00000455359 CCDC90BQ9GZT6 254 aa12.19□□□□□ -0.46
HMGXB4-204ENST00000455359 EGLN1Q9GZT9 426 aa12.19□□□□□ -0.46
HMGXB4-204ENST00000455359 MYOZ1Q9NP98 299 aaPredicted RBP12.19□□□□□ -0.46
HMGXB4-204ENST00000455359 ISYNA1Q9NPH2 558 aa12.19□□□□□ -0.46
HMGXB4-204ENST00000455359 HHLA2Q9UM44 414 aa12.19□□□□□ -0.46
HMGXB4-204ENST00000455359 LSM2Q9Y333 95 aaKnown RBP12.19□□□□□ -0.46
HMGXB4-204ENST00000455359 MPC1Q9Y5U8 109 aa12.19□□□□□ -0.46
HMGXB4-204ENST00000455359 V9GYS6 101 aa12.19□□□□□ -0.46
HMGXB4-204ENST00000455359 CACNA1DQ01668 2161 aa12.18□□□□□ -0.46
HMGXB4-204ENST00000455359 LRBAP50851 2863 aa12.18□□□□□ -0.46
HMGXB4-204ENST00000455359 ZNF816-ZNF321PA0A0X1KG74 233 aa12.18□□□□□ -0.46
HMGXB4-204ENST00000455359 ZSCAN5BA6NJL1 495 aa12.18□□□□□ -0.46
HMGXB4-204ENST00000455359 P2RY10O00398 339 aa12.18□□□□□ -0.46
HMGXB4-204ENST00000455359 ZFPL1O95159 310 aa12.18□□□□□ -0.46
HMGXB4-204ENST00000455359 TNFAIP8O95379 198 aa12.18□□□□□ -0.46
HMGXB4-204ENST00000455359 IGHV1-46P01743 117 aa12.18□□□□□ -0.46
HMGXB4-204ENST00000455359 MT-ND2P03891 347 aa12.18□□□□□ -0.46
HMGXB4-204ENST00000455359 NAT2P11245 290 aa12.18□□□□□ -0.46
HMGXB4-204ENST00000455359 CDKN1AP38936 164 aa12.18□□□□□ -0.46
HMGXB4-204ENST00000455359 CHN2P52757 468 aa12.18□□□□□ -0.46
HMGXB4-204ENST00000455359 ATP5J2P56134 94 aa12.18□□□□□ -0.46
HMGXB4-204ENST00000455359 GPR50Q13585 617 aa12.18□□□□□ -0.46
HMGXB4-204ENST00000455359 DMKNQ6E0U4 476 aaPredicted RBP12.18□□□□□ -0.46
HMGXB4-204ENST00000455359 PRSS57Q6UWY2 283 aa12.18□□□□□ -0.46
HMGXB4-204ENST00000455359 OR5AS1Q8N127 324 aa12.18□□□□□ -0.46
HMGXB4-204ENST00000455359 CELF2-AS1Q8N7Q2 184 aa12.18□□□□□ -0.46
HMGXB4-204ENST00000455359 ZNF676Q8N7Q3 588 aa12.18□□□□□ -0.46
HMGXB4-204ENST00000455359 OR14K1Q8NGZ2 314 aa12.18□□□□□ -0.46
HMGXB4-204ENST00000455359 OR5AK2Q8NH90 309 aa12.18□□□□□ -0.46
HMGXB4-204ENST00000455359 SGCDQ92629 289 aa12.18□□□□□ -0.46
HMGXB4-204ENST00000455359 PPP1R14AQ96A00 147 aa12.18□□□□□ -0.46
HMGXB4-204ENST00000455359 SMIM19Q96E16 107 aa12.18□□□□□ -0.46
HMGXB4-204ENST00000455359 MSL2Q9HCI7 577 aa12.18□□□□□ -0.46
HMGXB4-204ENST00000455359 ENPP5Q9UJA9 477 aa12.18□□□□□ -0.46
HMGXB4-204ENST00000455359 USF3Q68DE3 2245 aa12.18□□□□□ -0.46
HMGXB4-204ENST00000455359 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.17□□□□□ -0.46
HMGXB4-204ENST00000455359 LOC107986453A0A1B0GWG9 222 aa12.17□□□□□ -0.46
HMGXB4-204ENST00000455359 SPRY3O43610 288 aa12.17□□□□□ -0.46
HMGXB4-204ENST00000455359 PLPP2O43688 288 aa12.17□□□□□ -0.46
HMGXB4-204ENST00000455359 CSF3P09919 207 aa12.17□□□□□ -0.46
HMGXB4-204ENST00000455359 ACKR3P25106 362 aa12.17□□□□□ -0.46
HMGXB4-204ENST00000455359 GNALP38405 381 aa12.17□□□□□ -0.46
HMGXB4-204ENST00000455359 SRP9P49458 86 aaKnown RBP12.17□□□□□ -0.46
HMGXB4-204ENST00000455359 TNK1Q13470 666 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms