RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 A0A1W2PQL4 384 aaPredicted RBP11.94□□□□□ -0.5
HDAC4-205ENST00000454542 INAFM1C9JVW0 142 aa11.94□□□□□ -0.5
HDAC4-205ENST00000454542 GMDSO60547 372 aa11.94□□□□□ -0.5
HDAC4-205ENST00000454542 FSTL3O95633 263 aa11.94□□□□□ -0.5
HDAC4-205ENST00000454542 PNPP00491 289 aa11.94□□□□□ -0.5
HDAC4-205ENST00000454542 IGHV2-5P01817 119 aa11.94□□□□□ -0.5
HDAC4-205ENST00000454542 CA6P23280 308 aa11.94□□□□□ -0.5
HDAC4-205ENST00000454542 ACTC1P68032 377 aa11.94□□□□□ -0.5
HDAC4-205ENST00000454542 ACTA1P68133 377 aa11.94□□□□□ -0.5
HDAC4-205ENST00000454542 ZNF85Q03923 595 aa11.94□□□□□ -0.5
HDAC4-205ENST00000454542 AVPI1Q5T686 147 aa11.94□□□□□ -0.5
HDAC4-205ENST00000454542 CSNK2A3Q8NEV1 391 aa11.94□□□□□ -0.5
HDAC4-205ENST00000454542 CCL17Q92583 94 aa11.94□□□□□ -0.5
HDAC4-205ENST00000454542 ERGIC1Q969X5 290 aa11.94□□□□□ -0.5
HDAC4-205ENST00000454542 RNFT2Q96EX2 444 aa11.94□□□□□ -0.5
HDAC4-205ENST00000454542 TIMD4Q96H15 378 aa11.94□□□□□ -0.5
HDAC4-205ENST00000454542 APOL4Q9BPW4 351 aa11.94□□□□□ -0.5
HDAC4-205ENST00000454542 PBOV1Q9GZY1 135 aa11.94□□□□□ -0.5
HDAC4-205ENST00000454542 DCLRE1BQ9H816 532 aa11.94□□□□□ -0.5
HDAC4-205ENST00000454542 BRD7Q9NPI1 651 aa11.94□□□□□ -0.5
HDAC4-205ENST00000454542 AASSQ9UDR5 926 aa11.94□□□□□ -0.5
HDAC4-205ENST00000454542 PPP1R3CQ9UQK1 317 aa11.94□□□□□ -0.5
HDAC4-205ENST00000454542 EXOGQ9Y2C4 368 aaKnown RBP11.94□□□□□ -0.5
HDAC4-205ENST00000454542 N6AMT1Q9Y5N5 214 aa11.94□□□□□ -0.5
HDAC4-205ENST00000454542 NPTNQ9Y639 398 aa11.94□□□□□ -0.5
HDAC4-205ENST00000454542 NAV3Q8IVL0 2385 aa11.94□□□□□ -0.5
HDAC4-205ENST00000454542 TMEM178BH3BS89 294 aa11.93□□□□□ -0.5
HDAC4-205ENST00000454542 MAGEB4O15481 346 aaPredicted RBP11.93□□□□□ -0.5
HDAC4-205ENST00000454542 SULT1C4O75897 302 aa11.93□□□□□ -0.5
HDAC4-205ENST00000454542 TTRP02766 147 aa11.93□□□□□ -0.5
HDAC4-205ENST00000454542 DBTP11182 482 aaKnown RBP11.93□□□□□ -0.5
HDAC4-205ENST00000454542 ATP6V1B1P15313 513 aa11.93□□□□□ -0.5
HDAC4-205ENST00000454542 PMELP40967 661 aa11.93□□□□□ -0.5
HDAC4-205ENST00000454542 ADARB1P78563 741 aaKnown RBP11.93□□□□□ -0.5
HDAC4-205ENST00000454542 OR8G1Q15617 311 aa11.93□□□□□ -0.5
HDAC4-205ENST00000454542 SNCBQ16143 134 aa11.93□□□□□ -0.5
HDAC4-205ENST00000454542 GFOD2Q3B7J2 385 aa11.93□□□□□ -0.5
HDAC4-205ENST00000454542 TMEM155Q4W5P6 130 aa11.93□□□□□ -0.5
HDAC4-205ENST00000454542 ZNF691Q5VV52 312 aa11.93□□□□□ -0.5
HDAC4-205ENST00000454542 GALNT4Q8N4A0 578 aa11.93□□□□□ -0.5
HDAC4-205ENST00000454542 SPERTQ8NA61 448 aa11.93□□□□□ -0.5
HDAC4-205ENST00000454542 PLPP7Q8NBV4 271 aa11.93□□□□□ -0.5
HDAC4-205ENST00000454542 OR10H4Q8NGA5 316 aa11.93□□□□□ -0.5
HDAC4-205ENST00000454542 RAB1CQ92928 201 aa11.93□□□□□ -0.5
HDAC4-205ENST00000454542 DVL3Q92997 716 aaPredicted RBP11.93□□□□□ -0.5
HDAC4-205ENST00000454542 RNF166Q96A37 237 aaPredicted RBP11.93□□□□□ -0.5
HDAC4-205ENST00000454542 TBX5Q99593 518 aa11.93□□□□□ -0.5
HDAC4-205ENST00000454542 MRPS18AQ9NVS2 196 aaKnown RBP11.93□□□□□ -0.5
HDAC4-205ENST00000454542 TREM2Q9NZC2 230 aa11.93□□□□□ -0.5
HDAC4-205ENST00000454542 C2CD3Q4AC94 2353 aa11.93□□□□□ -0.5
HDAC4-205ENST00000454542 LOC100289279A0A1B0GTE1 492 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 ERICH4A6NGS2 130 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 SNTNA6NMZ2 147 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 ANKRD30BLA7E2S9 258 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 A8MV72 311 aaPredicted RBP11.92□□□□□ -0.5
HDAC4-205ENST00000454542 FAM157AC9JC47 383 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 F5H0A9 414 aaPredicted RBP11.92□□□□□ -0.5
HDAC4-205ENST00000454542 LOC110117498-PIK3R3F6TDL0 507 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 WBP4O75554 376 aaKnown RBP11.92□□□□□ -0.5
HDAC4-205ENST00000454542 CST4P01036 141 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 IGHA1P01876 353 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 KRT8P05787 483 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 CCL1P22362 96 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 RBMXP38159 391 aaKnown RBP11.92□□□□□ -0.5
HDAC4-205ENST00000454542 BTG1P62324 171 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 MVKQ03426 396 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 ZMYND11Q15326 602 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 LRRC36Q1X8D7 754 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 CDONQ4KMG0 1287 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 ZBTB37Q5TC79 503 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 PRAMEF6Q5VXH4 476 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 LIPNQ5VXI9 398 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 PLEKHG7Q6ZR37 379 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 WDR86Q86TI4 376 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 MOGAT3Q86VF5 341 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 ELMOD2Q8IZ81 293 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 FTMTQ8N4E7 242 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 LINC01356Q8N9X3 169 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 ZNF555Q8NEP9 628 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 ZNF420Q8TAQ5 688 aaPredicted RBP11.92□□□□□ -0.5
HDAC4-205ENST00000454542 RAB39BQ96DA2 213 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 LGALS12Q96DT0 336 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 ITPKCQ96DU7 683 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 Q96MT0 163 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 ZNF649Q9BS31 505 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 NARFLQ9H6Q4 476 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 ZNF665Q9H7R5 613 aa11.92□□□□□ -0.5
HDAC4-205ENST00000454542 NKX1-2Q9UD57 310 aaPredicted RBP11.92□□□□□ -0.5
HDAC4-205ENST00000454542 SETD2Q9BYW2 2564 aaPredicted RBP11.92□□□□□ -0.5
HDAC4-205ENST00000454542 SONP18583 2426 aaKnown RBP11.91□□□□□ -0.5
HDAC4-205ENST00000454542 A0A1B0GTI1 187 aa11.91□□□□□ -0.5
HDAC4-205ENST00000454542 METTL15A6NJ78 407 aa11.91□□□□□ -0.5
HDAC4-205ENST00000454542 FAM20BO75063 409 aa11.91□□□□□ -0.5
HDAC4-205ENST00000454542 DHRS3O75911 302 aa11.91□□□□□ -0.5
HDAC4-205ENST00000454542 MPPED2Q15777 294 aa11.91□□□□□ -0.5
HDAC4-205ENST00000454542 TTC23Q5W5X9 447 aa11.91□□□□□ -0.5
HDAC4-205ENST00000454542 FAM166AQ6J272 317 aa11.91□□□□□ -0.5
HDAC4-205ENST00000454542 CATSPERDQ86XM0 798 aa11.91□□□□□ -0.5
HDAC4-205ENST00000454542 HPSE2Q8WWQ2 592 aa11.91□□□□□ -0.5
HDAC4-205ENST00000454542 RORBQ92753 470 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms