RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 HGDQ93099 445 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 ARHGAP5-AS1Q96IT6 56 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 ZCCHC4Q9H5U6 513 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 EHFQ9NZC4 300 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 KANTRA0A1W2PQU2 76 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 M0R135 149 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 CTDSPLO15194 276 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 MSR1P21757 451 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 RGS19P49795 217 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 RSU1Q15404 277 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 TMEM164Q5U3C3 297 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 FAM180AQ6UWF9 173 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 C1orf210Q8IVY1 113 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 INO80EQ8NBZ0 244 aaPredicted RBP10.59□□□□□ -0.71
SMPD4-213ENST00000454468 RNF166Q96A37 237 aaPredicted RBP10.59□□□□□ -0.71
SMPD4-213ENST00000454468 ZNF799Q96GE5 643 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 ZNF319Q9P2F9 582 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 KLK13Q9UKR3 277 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 ATG2AQ2TAZ0 1938 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 FREM2Q5SZK8 3169 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 A0A0G2JMM0 328 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 A0A1W2PPB8 328 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 A0A1W2PRS3 328 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 ZNF850A8MQ14 1090 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 KIR3DP1A8MWS1 328 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 MPC2O95563 127 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 CD79AP11912 226 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 H2BFSP57053 126 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 SEC61A1P61619 476 aaKnown RBP10.59□□□□□ -0.71
SMPD4-213ENST00000454468 B2MP61769 119 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 DEFA5Q01523 94 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 ZNF774Q6NX45 483 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 EMC3Q9P0I2 261 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 A0A0J9YW62 118 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 SIGLEC5O15389 551 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 DHHO43323 396 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 TPOP07202 933 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 AKR1C2P52895 323 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 ROM1Q03395 351 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 AKR1C1Q04828 323 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 SIGLEC14Q08ET2 396 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 C3AR1Q16581 482 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 ABHD17BQ5VST6 288 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 ZNF626Q68DY1 528 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 SLC16A14Q7RTX9 510 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 GJC3Q8NFK1 279 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 FBXW5Q969U6 566 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 ZNF845Q96IR2 970 aaPredicted RBP10.59□□□□□ -0.71
SMPD4-213ENST00000454468 TGIF2Q9GZN2 237 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 CYB5R1Q9UHQ9 305 aa10.59□□□□□ -0.71
SMPD4-213ENST00000454468 PCNX1Q96RV3 2341 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 NCOA6Q14686 2063 aaPredicted RBP10.58□□□□□ -0.72
SMPD4-213ENST00000454468 RAB19A4D1S5 217 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 ADAM10O14672 748 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 TRAF3IP2O43734 574 aaPredicted RBP10.58□□□□□ -0.72
SMPD4-213ENST00000454468 TGM6O95932 706 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 APOC3P02656 99 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 PPP3CBP16298 524 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 CXCL2P19875 107 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 S100A11P31949 105 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 NUP62P37198 522 aaPredicted RBP10.58□□□□□ -0.72
SMPD4-213ENST00000454468 DHRS2Q13268 280 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 DHRS13Q6UX07 377 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 TMUB2Q71RG4 321 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 CARFQ8N187 725 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 USB1Q9BQ65 265 aaKnown RBP10.58□□□□□ -0.72
SMPD4-213ENST00000454468 TMPRSS13Q9BYE2 586 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 CST11Q9H112 138 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 LDAHQ9H6V9 325 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 IFT22Q9H7X7 185 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 B3GAT1Q9P2W7 334 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 CYB561P49447 251 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 SUMO3P55854 103 aaPredicted RBP10.58□□□□□ -0.72
SMPD4-213ENST00000454468 PPP1R1AQ13522 171 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 PCOLCEQ15113 449 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 TEX30Q5JUR7 227 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 ASPHD2Q6ICH7 369 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 RAB12Q6IQ22 244 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 HDDC2Q7Z4H3 204 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 MAML2Q8IZL2 1156 aaPredicted RBP10.58□□□□□ -0.72
SMPD4-213ENST00000454468 NKAIN3Q8N8D7 197 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 PNPLA2Q96AD5 504 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 FOXRED1Q96CU9 486 aaPredicted RBP10.58□□□□□ -0.72
SMPD4-213ENST00000454468 TWSG1Q9GZX9 223 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 LRFN1Q9P244 771 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 NXT1Q9UKK6 140 aaKnown RBP10.58□□□□□ -0.72
SMPD4-213ENST00000454468 ACACAQ13085 2346 aa10.58□□□□□ -0.72
SMPD4-213ENST00000454468 FREM1Q5H8C1 2179 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 DLSTP36957 453 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 LUMP51884 338 aaPredicted RBP10.57□□□□□ -0.72
SMPD4-213ENST00000454468 EXT1Q16394 746 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 GSG1LQ6UXU4 331 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 PEG10Q86TG7 708 aaKnown RBP10.57□□□□□ -0.72
SMPD4-213ENST00000454468 UBALD2Q8IYN6 164 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 OR10S1Q8NGN2 331 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 SPTSSAQ969W0 71 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 PRRT1Q99946 306 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 PIGQQ9BRB3 760 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 GSX2Q9BZM3 304 aa10.57□□□□□ -0.72
SMPD4-213ENST00000454468 STRADBQ9C0K7 418 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms