RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 POFUT1Q9H488 388 aa16.59■□□□□ 0.25
RPS28-202ENST00000449223 A0A1W2PPK0 400 aa16.58■□□□□ 0.24
RPS28-202ENST00000449223 DPRXA6NFQ7 191 aa16.58■□□□□ 0.24
RPS28-202ENST00000449223 ALX3O95076 343 aa16.58■□□□□ 0.24
RPS28-202ENST00000449223 FAM157BP0CG42 384 aa16.58■□□□□ 0.24
RPS28-202ENST00000449223 RAC2P15153 192 aa16.58■□□□□ 0.24
RPS28-202ENST00000449223 THBS4P35443 961 aa16.58■□□□□ 0.24
RPS28-202ENST00000449223 RPS19P39019 145 aaKnown RBP16.58■□□□□ 0.24
RPS28-202ENST00000449223 DDOSTP39656 456 aa16.58■□□□□ 0.24
RPS28-202ENST00000449223 RIPPLY1Q0D2K3 151 aa16.58■□□□□ 0.24
RPS28-202ENST00000449223 TMEM42Q69YG0 159 aa16.58■□□□□ 0.24
RPS28-202ENST00000449223 UTS2BQ765I0 119 aa16.58■□□□□ 0.24
RPS28-202ENST00000449223 MRPL21Q7Z2W9 205 aaKnown RBP16.58■□□□□ 0.24
RPS28-202ENST00000449223 NUP37Q8NFH4 326 aa16.58■□□□□ 0.24
RPS28-202ENST00000449223 OR5D14Q8NGL3 314 aa16.58■□□□□ 0.24
RPS28-202ENST00000449223 SLC25A46Q96AG3 418 aa16.58■□□□□ 0.24
RPS28-202ENST00000449223 MARS2Q96GW9 593 aaKnown RBP16.58■□□□□ 0.24
RPS28-202ENST00000449223 CHST5Q9GZS9 411 aa16.58■□□□□ 0.24
RPS28-202ENST00000449223 PLEKHA1Q9HB21 404 aa16.58■□□□□ 0.24
RPS28-202ENST00000449223 CKLFQ9UBR5 152 aa16.58■□□□□ 0.24
RPS28-202ENST00000449223 SPEF1Q9Y4P9 236 aa16.58■□□□□ 0.24
RPS28-202ENST00000449223 TRAV8-7A0A075B6U6 113 aa16.57■□□□□ 0.24
RPS28-202ENST00000449223 TUBAL3A6NHL2 446 aa16.57■□□□□ 0.24
RPS28-202ENST00000449223 CDRT1O95170 752 aa16.57■□□□□ 0.24
RPS28-202ENST00000449223 CD37P11049 281 aa16.57■□□□□ 0.24
RPS28-202ENST00000449223 IGFBP2P18065 325 aa16.57■□□□□ 0.24
RPS28-202ENST00000449223 MBNL2Q5VZF2 373 aaKnown RBP16.57■□□□□ 0.24
RPS28-202ENST00000449223 LRRTM1Q86UE6 522 aa16.57■□□□□ 0.24
RPS28-202ENST00000449223 OR1J1Q8NGS3 322 aa16.57■□□□□ 0.24
RPS28-202ENST00000449223 ZC3HAV1LQ96H79 300 aaKnown RBP16.57■□□□□ 0.24
RPS28-202ENST00000449223 OR2J1Q9GZK6 312 aa16.57■□□□□ 0.24
RPS28-202ENST00000449223 ZCCHC4Q9H5U6 513 aa16.57■□□□□ 0.24
RPS28-202ENST00000449223 TCF7L1Q9HCS4 588 aa16.57■□□□□ 0.24
RPS28-202ENST00000449223 PTTG3PQ9NZH4 202 aa16.57■□□□□ 0.24
RPS28-202ENST00000449223 PTTG2Q9NZH5 202 aa16.57■□□□□ 0.24
RPS28-202ENST00000449223 CCDC59Q9P031 241 aaKnown RBP16.57■□□□□ 0.24
RPS28-202ENST00000449223 PIGLQ9Y2B2 252 aa16.57■□□□□ 0.24
RPS28-202ENST00000449223 CASKO14936 926 aa16.56■□□□□ 0.24
RPS28-202ENST00000449223 ZNF20P17024 532 aa16.56■□□□□ 0.24
RPS28-202ENST00000449223 ZNF182P17025 639 aaPredicted RBP16.56■□□□□ 0.24
RPS28-202ENST00000449223 GLRXP35754 106 aa16.56■□□□□ 0.24
RPS28-202ENST00000449223 BSPH1Q075Z2 132 aa16.56■□□□□ 0.24
RPS28-202ENST00000449223 NCMAPQ5T1S8 102 aa16.56■□□□□ 0.24
RPS28-202ENST00000449223 CSNK2A3Q8NEV1 391 aa16.56■□□□□ 0.24
RPS28-202ENST00000449223 SLC25A40Q8TBP6 338 aa16.56■□□□□ 0.24
RPS28-202ENST00000449223 ORAI1Q96D31 301 aa16.56■□□□□ 0.24
RPS28-202ENST00000449223 SLITRK2Q9H156 845 aa16.56■□□□□ 0.24
RPS28-202ENST00000449223 ESRP2Q9H6T0 727 aaKnown RBP16.56■□□□□ 0.24
RPS28-202ENST00000449223 PLCE1Q9P212 2302 aa16.56■□□□□ 0.24
RPS28-202ENST00000449223 PDCD5O14737 125 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 TMEM127O75204 238 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 FAHP16930 419 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 CFPP27918 469 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 ERVS71-1P61550 626 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 HLXQ14774 488 aaPredicted RBP16.55■□□□□ 0.24
RPS28-202ENST00000449223 CEP78Q5JTW2 689 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 ALKBH2Q6NS38 261 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 NR2C2APQ86WQ0 139 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 FTMTQ8N4E7 242 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 ACBD4Q8NC06 268 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 OR56B2PQ8NGI1 322 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 LINC01560Q8TB33 94 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 KLF14Q8TD94 323 aaPredicted RBP16.55■□□□□ 0.24
RPS28-202ENST00000449223 HAVCR1Q96D42 359 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 RADILQ96JH8 1075 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 TAS2R4Q9NYW5 299 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 A0A0G2JK05 382 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 ZNF816-ZNF321PA0A0X1KG74 233 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 MEGF11A6BM72 1044 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 ANKRD61A6NGH8 418 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 CD300LBA8K4G0 201 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 ATP6V1G2-DDX39BF2Z307 99 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 SULT1B1O43704 296 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 CST4P01036 141 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 SELEP16581 610 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 ADRA2CP18825 462 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 RAB3BP20337 219 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 RPS23P62266 143 aaKnown RBP16.55■□□□□ 0.24
RPS28-202ENST00000449223 SPOCK1Q08629 439 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 CROCCP3Q8IVE0 287 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 UBASH3BQ8TF42 649 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 PIGTQ969N2 578 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 TECTBQ96PL2 329 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 SLC30A2Q9BRI3 323 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 DCUN1D5Q9BTE7 237 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 SLIRPQ9GZT3 109 aaKnown RBP16.55■□□□□ 0.24
RPS28-202ENST00000449223 OR51B6Q9H340 312 aa16.55■□□□□ 0.24
RPS28-202ENST00000449223 IQCF6A8MYZ5 107 aa16.54■□□□□ 0.24
RPS28-202ENST00000449223 ABCD4O14678 606 aa16.54■□□□□ 0.24
RPS28-202ENST00000449223 CLEC2LP0C7M8 214 aa16.54■□□□□ 0.24
RPS28-202ENST00000449223 ZNF250P15622 560 aa16.54■□□□□ 0.24
RPS28-202ENST00000449223 KITLGP21583 273 aa16.54■□□□□ 0.24
RPS28-202ENST00000449223 GNALP38405 381 aa16.54■□□□□ 0.24
RPS28-202ENST00000449223 PSMD7P51665 324 aa16.54■□□□□ 0.24
RPS28-202ENST00000449223 PPP3R1P63098 170 aa16.54■□□□□ 0.24
RPS28-202ENST00000449223 SNTB2Q13425 540 aaKnown RBP16.54■□□□□ 0.24
RPS28-202ENST00000449223 ZNF718Q3SXZ3 478 aa16.54■□□□□ 0.24
RPS28-202ENST00000449223 BEX5Q5H9J7 111 aa16.54■□□□□ 0.24
RPS28-202ENST00000449223 CLVS2Q5SYC1 327 aa16.54■□□□□ 0.24
RPS28-202ENST00000449223 SPATA46Q5T0L3 261 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms